Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03945 and CA264_03950 are separated by 368 nucleotides CA264_03950 and CA264_03955 are separated by 3 nucleotides
CA264_03945: CA264_03945 - hypothetical protein, at 915,313 to 916,218
_03945
CA264_03950: CA264_03950 - 4-carboxymuconolactone decarboxylase, at 916,587 to 916,922
_03950
CA264_03955: CA264_03955 - radical SAM/Cys-rich domain protein, at 916,926 to 917,993
_03955
Position (kb)
916
917 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 915.595 kb on + strand, within CA264_03945 at 915.596 kb on - strand, within CA264_03945 at 915.598 kb on + strand, within CA264_03945 at 915.599 kb on - strand, within CA264_03945 at 915.599 kb on - strand, within CA264_03945 at 915.601 kb on - strand, within CA264_03945 at 915.624 kb on + strand, within CA264_03945 at 915.624 kb on + strand, within CA264_03945 at 915.629 kb on - strand, within CA264_03945 at 915.651 kb on + strand, within CA264_03945 at 915.651 kb on + strand, within CA264_03945 at 915.741 kb on + strand, within CA264_03945 at 915.741 kb on + strand, within CA264_03945 at 915.742 kb on - strand, within CA264_03945 at 915.768 kb on + strand, within CA264_03945 at 915.783 kb on + strand, within CA264_03945 at 915.783 kb on + strand, within CA264_03945 at 915.783 kb on + strand, within CA264_03945 at 915.784 kb on - strand, within CA264_03945 at 915.819 kb on + strand, within CA264_03945 at 915.901 kb on + strand, within CA264_03945 at 915.901 kb on + strand, within CA264_03945 at 915.901 kb on + strand, within CA264_03945 at 915.901 kb on + strand, within CA264_03945 at 915.935 kb on + strand, within CA264_03945 at 916.067 kb on - strand, within CA264_03945 at 916.083 kb on + strand, within CA264_03945 at 916.116 kb on - strand, within CA264_03945 at 916.116 kb on - strand, within CA264_03945 at 916.120 kb on + strand, within CA264_03945 at 916.121 kb on - strand, within CA264_03945 at 916.179 kb on + strand at 916.179 kb on + strand at 916.179 kb on + strand at 916.180 kb on - strand at 916.264 kb on + strand at 916.265 kb on - strand at 916.265 kb on - strand at 916.267 kb on + strand at 916.267 kb on + strand at 916.270 kb on + strand at 916.270 kb on + strand at 916.271 kb on - strand at 916.271 kb on - strand at 916.271 kb on - strand at 916.273 kb on + strand at 916.273 kb on + strand at 916.274 kb on - strand at 916.274 kb on - strand at 916.277 kb on - strand at 916.277 kb on - strand at 916.323 kb on - strand at 916.330 kb on + strand at 916.330 kb on + strand at 916.331 kb on - strand at 916.363 kb on + strand at 916.364 kb on - strand at 916.375 kb on + strand at 916.375 kb on + strand at 916.431 kb on - strand at 916.431 kb on - strand at 916.462 kb on + strand at 916.463 kb on - strand at 916.552 kb on + strand at 916.564 kb on - strand at 916.585 kb on - strand at 916.599 kb on + strand at 916.709 kb on + strand, within CA264_03950 at 916.710 kb on - strand, within CA264_03950 at 916.757 kb on - strand, within CA264_03950 at 916.920 kb on + strand at 916.923 kb on + strand at 916.924 kb on - strand at 916.924 kb on - strand at 916.949 kb on + strand at 916.950 kb on - strand at 916.950 kb on - strand at 917.009 kb on + strand at 917.009 kb on + strand at 917.009 kb on + strand at 917.066 kb on - strand, within CA264_03955 at 917.093 kb on + strand, within CA264_03955 at 917.093 kb on + strand, within CA264_03955 at 917.234 kb on - strand, within CA264_03955 at 917.234 kb on - strand, within CA264_03955 at 917.242 kb on + strand, within CA264_03955 at 917.243 kb on - strand, within CA264_03955 at 917.350 kb on + strand, within CA264_03955 at 917.350 kb on + strand, within CA264_03955 at 917.350 kb on + strand, within CA264_03955 at 917.351 kb on - strand, within CA264_03955 at 917.556 kb on + strand, within CA264_03955 at 917.557 kb on - strand, within CA264_03955 at 917.624 kb on - strand, within CA264_03955 at 917.698 kb on - strand, within CA264_03955 at 917.718 kb on + strand, within CA264_03955 at 917.718 kb on + strand, within CA264_03955 at 917.719 kb on - strand, within CA264_03955 at 917.728 kb on - strand, within CA264_03955 at 917.820 kb on + strand, within CA264_03955 at 917.905 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 915,595 + CA264_03945 0.31 -0.3 915,596 - CA264_03945 0.31 +0.6 915,598 + CA264_03945 0.31 +0.2 915,599 - CA264_03945 0.32 -0.5 915,599 - CA264_03945 0.32 +0.1 915,601 - CA264_03945 0.32 -0.6 915,624 + CA264_03945 0.34 -0.7 915,624 + CA264_03945 0.34 -0.1 915,629 - CA264_03945 0.35 -0.0 915,651 + CA264_03945 0.37 -0.7 915,651 + CA264_03945 0.37 -0.2 915,741 + CA264_03945 0.47 -0.6 915,741 + CA264_03945 0.47 +0.5 915,742 - CA264_03945 0.47 +0.6 915,768 + CA264_03945 0.50 +0.4 915,783 + CA264_03945 0.52 +0.3 915,783 + CA264_03945 0.52 +0.1 915,783 + CA264_03945 0.52 +0.9 915,784 - CA264_03945 0.52 +0.5 915,819 + CA264_03945 0.56 -0.0 915,901 + CA264_03945 0.65 -0.8 915,901 + CA264_03945 0.65 +0.5 915,901 + CA264_03945 0.65 +0.4 915,901 + CA264_03945 0.65 +0.0 915,935 + CA264_03945 0.69 -0.5 916,067 - CA264_03945 0.83 +0.2 916,083 + CA264_03945 0.85 +0.2 916,116 - CA264_03945 0.89 -0.3 916,116 - CA264_03945 0.89 +0.4 916,120 + CA264_03945 0.89 +0.4 916,121 - CA264_03945 0.89 -0.7 916,179 + -2.8 916,179 + -1.6 916,179 + +0.1 916,180 - +0.3 916,264 + +0.1 916,265 - +0.5 916,265 - -1.4 916,267 + -0.4 916,267 + -0.4 916,270 + +0.3 916,270 + -0.9 916,271 - +1.7 916,271 - -0.3 916,271 - -0.3 916,273 + -1.0 916,273 + +0.7 916,274 - +0.1 916,274 - -0.6 916,277 - -0.3 916,277 - -0.1 916,323 - +0.3 916,330 + -0.8 916,330 + +0.3 916,331 - -0.5 916,363 + +0.6 916,364 - -0.6 916,375 + +0.9 916,375 + -2.2 916,431 - +1.7 916,431 - +0.1 916,462 + +0.5 916,463 - +0.3 916,552 + +0.6 916,564 - +0.5 916,585 - +0.1 916,599 + +1.0 916,709 + CA264_03950 0.36 +0.1 916,710 - CA264_03950 0.37 +0.4 916,757 - CA264_03950 0.51 +1.8 916,920 + -0.4 916,923 + -0.4 916,924 - -0.4 916,924 - -0.5 916,949 + -1.0 916,950 - -0.1 916,950 - +0.8 917,009 + -1.3 917,009 + +0.6 917,009 + -0.6 917,066 - CA264_03955 0.13 +0.2 917,093 + CA264_03955 0.16 -1.8 917,093 + CA264_03955 0.16 +0.2 917,234 - CA264_03955 0.29 -0.6 917,234 - CA264_03955 0.29 -0.3 917,242 + CA264_03955 0.30 -1.7 917,243 - CA264_03955 0.30 -0.0 917,350 + CA264_03955 0.40 +0.2 917,350 + CA264_03955 0.40 -0.4 917,350 + CA264_03955 0.40 -0.6 917,351 - CA264_03955 0.40 +1.1 917,556 + CA264_03955 0.59 -0.0 917,557 - CA264_03955 0.59 -1.7 917,624 - CA264_03955 0.65 -0.4 917,698 - CA264_03955 0.72 +0.3 917,718 + CA264_03955 0.74 -0.4 917,718 + CA264_03955 0.74 -0.7 917,719 - CA264_03955 0.74 -0.1 917,728 - CA264_03955 0.75 -0.6 917,820 + CA264_03955 0.84 -1.1 917,905 + +0.4
Or see this region's nucleotide sequence