Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_03765

Experiment: m.b. Chloride 500 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_03760 and CA264_03765 are separated by 91 nucleotidesCA264_03765 and CA264_03770 are separated by 178 nucleotides CA264_03760: CA264_03760 - hypothetical protein, at 883,267 to 883,659 _03760 CA264_03765: CA264_03765 - tRNA-Glu, at 883,751 to 883,825 _03765 CA264_03770: CA264_03770 - type I glyceraldehyde-3-phosphate dehydrogenase, at 884,004 to 884,996 _03770 Position (kb) 883 884Strain fitness (log2 ratio) -2 -1 0 1 2at 882.776 kb on + strandat 882.779 kb on + strandat 882.781 kb on + strandat 882.781 kb on + strandat 882.824 kb on + strandat 882.848 kb on + strandat 882.855 kb on + strandat 882.917 kb on + strandat 882.936 kb on + strandat 882.943 kb on - strandat 883.021 kb on - strandat 883.024 kb on + strandat 883.044 kb on + strandat 883.045 kb on - strandat 883.045 kb on - strandat 883.045 kb on - strandat 883.048 kb on + strandat 883.105 kb on - strandat 883.107 kb on - strandat 883.169 kb on + strandat 883.210 kb on + strandat 883.261 kb on + strandat 883.261 kb on + strandat 883.294 kb on + strandat 883.294 kb on + strandat 883.296 kb on + strandat 883.302 kb on + strandat 883.323 kb on + strand, within CA264_03760at 883.343 kb on + strand, within CA264_03760at 883.343 kb on + strand, within CA264_03760at 883.344 kb on - strand, within CA264_03760at 883.372 kb on + strand, within CA264_03760at 883.372 kb on + strand, within CA264_03760at 883.373 kb on - strand, within CA264_03760at 883.394 kb on - strand, within CA264_03760at 883.409 kb on + strand, within CA264_03760at 883.410 kb on - strand, within CA264_03760at 883.410 kb on - strand, within CA264_03760at 883.414 kb on + strand, within CA264_03760at 883.439 kb on - strand, within CA264_03760at 883.516 kb on - strand, within CA264_03760at 883.517 kb on + strand, within CA264_03760at 883.517 kb on + strand, within CA264_03760at 883.517 kb on + strand, within CA264_03760at 883.517 kb on + strand, within CA264_03760at 883.518 kb on - strand, within CA264_03760at 883.564 kb on - strand, within CA264_03760at 883.589 kb on - strand, within CA264_03760at 883.658 kb on - strandat 883.665 kb on - strandat 883.672 kb on - strandat 883.672 kb on - strandat 883.888 kb on + strandat 883.912 kb on + strandat 883.951 kb on + strandat 883.952 kb on - strandat 883.956 kb on + strandat 883.956 kb on + strandat 883.957 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM
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882,776 + -0.3
882,779 + -0.8
882,781 + +1.1
882,781 + -0.1
882,824 + -1.7
882,848 + -0.5
882,855 + +0.1
882,917 + -1.3
882,936 + +0.2
882,943 - -1.9
883,021 - -1.1
883,024 + -0.3
883,044 + -0.0
883,045 - -2.1
883,045 - -0.1
883,045 - -1.0
883,048 + -0.8
883,105 - -1.0
883,107 - -2.0
883,169 + +0.1
883,210 + -0.6
883,261 + -0.7
883,261 + -0.3
883,294 + -2.0
883,294 + -1.2
883,296 + -0.7
883,302 + +1.0
883,323 + CA264_03760 0.14 -1.0
883,343 + CA264_03760 0.19 -0.3
883,343 + CA264_03760 0.19 -0.5
883,344 - CA264_03760 0.20 -2.7
883,372 + CA264_03760 0.27 +0.6
883,372 + CA264_03760 0.27 -0.7
883,373 - CA264_03760 0.27 -2.5
883,394 - CA264_03760 0.32 -0.7
883,409 + CA264_03760 0.36 -2.3
883,410 - CA264_03760 0.36 -1.6
883,410 - CA264_03760 0.36 +0.1
883,414 + CA264_03760 0.37 +2.6
883,439 - CA264_03760 0.44 -0.0
883,516 - CA264_03760 0.63 -2.6
883,517 + CA264_03760 0.64 -0.4
883,517 + CA264_03760 0.64 -0.9
883,517 + CA264_03760 0.64 -0.3
883,517 + CA264_03760 0.64 -0.4
883,518 - CA264_03760 0.64 -1.4
883,564 - CA264_03760 0.76 -2.1
883,589 - CA264_03760 0.82 -1.3
883,658 - -1.7
883,665 - -2.1
883,672 - -2.0
883,672 - -0.7
883,888 + -0.9
883,912 + +0.1
883,951 + +0.6
883,952 - -0.9
883,956 + -0.7
883,956 + +2.3
883,957 - -0.1

Or see this region's nucleotide sequence