Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03345 and CA264_03350 overlap by 14 nucleotides CA264_03350 and CA264_03355 are separated by 98 nucleotides
CA264_03345: CA264_03345 - hypothetical protein, at 783,197 to 784,594
_03345
CA264_03350: CA264_03350 - RNA polymerase subunit sigma-24, at 784,581 to 785,180
_03350
CA264_03355: CA264_03355 - VWA domain-containing protein, at 785,279 to 787,144
_03355
Position (kb) 784
785
786 Strain fitness (log2 ratio) -1
0
1
2 at 783.603 kb on + strand, within CA264_03345 at 783.649 kb on - strand, within CA264_03345 at 783.669 kb on - strand, within CA264_03345 at 784.000 kb on + strand, within CA264_03345 at 784.059 kb on - strand, within CA264_03345 at 784.059 kb on - strand, within CA264_03345 at 784.095 kb on + strand, within CA264_03345 at 784.096 kb on - strand, within CA264_03345 at 784.112 kb on - strand, within CA264_03345 at 784.156 kb on + strand, within CA264_03345 at 784.168 kb on + strand, within CA264_03345 at 784.169 kb on - strand, within CA264_03345 at 784.197 kb on - strand, within CA264_03345 at 784.220 kb on + strand, within CA264_03345 at 784.221 kb on - strand, within CA264_03345 at 784.238 kb on + strand, within CA264_03345 at 784.238 kb on + strand, within CA264_03345 at 784.239 kb on - strand, within CA264_03345 at 784.239 kb on - strand, within CA264_03345 at 784.239 kb on - strand, within CA264_03345 at 784.266 kb on + strand, within CA264_03345 at 784.273 kb on - strand, within CA264_03345 at 784.275 kb on + strand, within CA264_03345 at 784.305 kb on - strand, within CA264_03345 at 784.305 kb on - strand, within CA264_03345 at 784.365 kb on - strand, within CA264_03345 at 784.377 kb on - strand, within CA264_03345 at 784.377 kb on - strand, within CA264_03345 at 784.571 kb on + strand at 784.571 kb on + strand at 784.572 kb on - strand at 784.583 kb on - strand at 784.642 kb on + strand, within CA264_03350 at 784.692 kb on - strand, within CA264_03350 at 784.693 kb on + strand, within CA264_03350 at 784.730 kb on + strand, within CA264_03350 at 784.732 kb on + strand, within CA264_03350 at 784.732 kb on + strand, within CA264_03350 at 784.732 kb on + strand, within CA264_03350 at 784.732 kb on + strand, within CA264_03350 at 784.945 kb on - strand, within CA264_03350 at 785.044 kb on + strand, within CA264_03350 at 785.188 kb on - strand at 785.190 kb on - strand at 785.190 kb on - strand at 785.236 kb on - strand at 785.255 kb on + strand at 785.255 kb on + strand at 785.256 kb on - strand at 785.451 kb on - strand at 785.459 kb on + strand at 785.460 kb on - strand at 785.529 kb on + strand, within CA264_03355 at 785.529 kb on + strand, within CA264_03355 at 785.530 kb on - strand, within CA264_03355 at 785.530 kb on - strand, within CA264_03355 at 785.559 kb on + strand, within CA264_03355 at 785.559 kb on + strand, within CA264_03355 at 785.559 kb on + strand, within CA264_03355 at 785.560 kb on - strand, within CA264_03355 at 785.627 kb on - strand, within CA264_03355 at 785.627 kb on - strand, within CA264_03355 at 785.679 kb on - strand, within CA264_03355 at 785.691 kb on - strand, within CA264_03355 at 785.732 kb on + strand, within CA264_03355 at 785.733 kb on - strand, within CA264_03355 at 785.739 kb on - strand, within CA264_03355 at 785.767 kb on + strand, within CA264_03355 at 785.863 kb on - strand, within CA264_03355 at 785.894 kb on + strand, within CA264_03355 at 785.894 kb on + strand, within CA264_03355 at 785.895 kb on - strand, within CA264_03355 at 785.899 kb on + strand, within CA264_03355 at 785.899 kb on + strand, within CA264_03355 at 785.903 kb on + strand, within CA264_03355 at 785.903 kb on + strand, within CA264_03355 at 785.903 kb on + strand, within CA264_03355 at 785.904 kb on - strand, within CA264_03355 at 785.904 kb on - strand, within CA264_03355 at 785.904 kb on - strand, within CA264_03355 at 785.904 kb on - strand, within CA264_03355 at 785.946 kb on - strand, within CA264_03355 at 786.170 kb on + strand, within CA264_03355 at 786.170 kb on + strand, within CA264_03355
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 783,603 + CA264_03345 0.29 +0.5 783,649 - CA264_03345 0.32 -0.6 783,669 - CA264_03345 0.34 -1.4 784,000 + CA264_03345 0.57 -0.3 784,059 - CA264_03345 0.62 +0.1 784,059 - CA264_03345 0.62 +0.1 784,095 + CA264_03345 0.64 -0.2 784,096 - CA264_03345 0.64 +0.0 784,112 - CA264_03345 0.65 +2.3 784,156 + CA264_03345 0.69 -0.1 784,168 + CA264_03345 0.69 -0.4 784,169 - CA264_03345 0.70 +0.5 784,197 - CA264_03345 0.72 +0.6 784,220 + CA264_03345 0.73 -1.1 784,221 - CA264_03345 0.73 -0.9 784,238 + CA264_03345 0.74 +0.2 784,238 + CA264_03345 0.74 +0.1 784,239 - CA264_03345 0.75 -0.9 784,239 - CA264_03345 0.75 -1.0 784,239 - CA264_03345 0.75 +0.5 784,266 + CA264_03345 0.76 +0.0 784,273 - CA264_03345 0.77 -1.0 784,275 + CA264_03345 0.77 -0.1 784,305 - CA264_03345 0.79 +0.3 784,305 - CA264_03345 0.79 +0.4 784,365 - CA264_03345 0.84 -0.5 784,377 - CA264_03345 0.84 +0.5 784,377 - CA264_03345 0.84 -0.4 784,571 + -0.0 784,571 + -0.7 784,572 - -0.3 784,583 - +1.1 784,642 + CA264_03350 0.10 -1.4 784,692 - CA264_03350 0.18 +0.1 784,693 + CA264_03350 0.19 -0.1 784,730 + CA264_03350 0.25 -1.0 784,732 + CA264_03350 0.25 -0.4 784,732 + CA264_03350 0.25 -0.4 784,732 + CA264_03350 0.25 -0.4 784,732 + CA264_03350 0.25 -0.7 784,945 - CA264_03350 0.61 -0.9 785,044 + CA264_03350 0.77 +0.0 785,188 - -0.1 785,190 - +0.6 785,190 - -0.3 785,236 - -0.0 785,255 + -0.6 785,255 + +0.5 785,256 - -0.2 785,451 - +0.0 785,459 + +1.3 785,460 - +2.7 785,529 + CA264_03355 0.13 +1.0 785,529 + CA264_03355 0.13 +0.5 785,530 - CA264_03355 0.13 +0.0 785,530 - CA264_03355 0.13 -0.3 785,559 + CA264_03355 0.15 +0.6 785,559 + CA264_03355 0.15 +0.6 785,559 + CA264_03355 0.15 +1.7 785,560 - CA264_03355 0.15 -0.9 785,627 - CA264_03355 0.19 +0.1 785,627 - CA264_03355 0.19 -0.2 785,679 - CA264_03355 0.21 +0.0 785,691 - CA264_03355 0.22 +0.0 785,732 + CA264_03355 0.24 +0.0 785,733 - CA264_03355 0.24 +0.8 785,739 - CA264_03355 0.25 -0.5 785,767 + CA264_03355 0.26 +0.0 785,863 - CA264_03355 0.31 +0.1 785,894 + CA264_03355 0.33 +0.8 785,894 + CA264_03355 0.33 +0.0 785,895 - CA264_03355 0.33 -0.3 785,899 + CA264_03355 0.33 -0.5 785,899 + CA264_03355 0.33 +0.2 785,903 + CA264_03355 0.33 -0.8 785,903 + CA264_03355 0.33 +0.6 785,903 + CA264_03355 0.33 -0.1 785,904 - CA264_03355 0.33 +0.4 785,904 - CA264_03355 0.33 +0.4 785,904 - CA264_03355 0.33 -0.5 785,904 - CA264_03355 0.33 -0.1 785,946 - CA264_03355 0.36 +0.9 786,170 + CA264_03355 0.48 -0.3 786,170 + CA264_03355 0.48 -0.3
Or see this region's nucleotide sequence