Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03125 and CA264_03130 are separated by 160 nucleotides CA264_03130 and CA264_03135 are separated by 54 nucleotides
CA264_03125: CA264_03125 - oxygen-independent coproporphyrinogen III oxidase, at 729,000 to 730,376
_03125
CA264_03130: CA264_03130 - alanine racemase, at 730,537 to 731,655
_03130
CA264_03135: CA264_03135 - hydrolase, at 731,710 to 732,537
_03135
Position (kb) 730
731
732 Strain fitness (log2 ratio) -2
-1
0
1 at 729.547 kb on + strand, within CA264_03125 at 729.632 kb on - strand, within CA264_03125 at 729.632 kb on - strand, within CA264_03125 at 729.632 kb on - strand, within CA264_03125 at 729.638 kb on - strand, within CA264_03125 at 729.638 kb on - strand, within CA264_03125 at 729.721 kb on + strand, within CA264_03125 at 729.725 kb on + strand, within CA264_03125 at 729.726 kb on - strand, within CA264_03125 at 729.747 kb on - strand, within CA264_03125 at 729.747 kb on - strand, within CA264_03125 at 729.749 kb on - strand, within CA264_03125 at 730.106 kb on - strand, within CA264_03125 at 730.157 kb on - strand, within CA264_03125 at 730.264 kb on - strand at 730.330 kb on + strand at 730.458 kb on - strand at 730.458 kb on - strand at 730.532 kb on - strand at 730.545 kb on + strand at 730.545 kb on + strand at 730.545 kb on + strand at 730.546 kb on - strand at 730.555 kb on - strand at 730.560 kb on - strand at 730.628 kb on + strand at 730.647 kb on + strand at 730.762 kb on - strand, within CA264_03130 at 730.954 kb on + strand, within CA264_03130 at 730.985 kb on + strand, within CA264_03130 at 731.037 kb on + strand, within CA264_03130 at 731.038 kb on - strand, within CA264_03130 at 731.041 kb on + strand, within CA264_03130 at 731.041 kb on + strand, within CA264_03130 at 731.041 kb on + strand, within CA264_03130 at 731.042 kb on - strand, within CA264_03130 at 731.042 kb on - strand, within CA264_03130 at 731.042 kb on - strand, within CA264_03130 at 731.059 kb on + strand, within CA264_03130 at 731.060 kb on - strand, within CA264_03130 at 731.121 kb on + strand, within CA264_03130 at 731.121 kb on + strand, within CA264_03130 at 731.121 kb on + strand, within CA264_03130 at 731.275 kb on - strand, within CA264_03130 at 731.286 kb on + strand, within CA264_03130 at 731.287 kb on - strand, within CA264_03130 at 731.287 kb on - strand, within CA264_03130 at 731.287 kb on - strand, within CA264_03130 at 731.338 kb on + strand, within CA264_03130 at 731.371 kb on - strand, within CA264_03130 at 731.395 kb on - strand, within CA264_03130 at 731.687 kb on - strand at 731.687 kb on - strand at 731.689 kb on - strand at 731.764 kb on - strand at 731.885 kb on - strand, within CA264_03135 at 731.885 kb on - strand, within CA264_03135 at 732.058 kb on + strand, within CA264_03135 at 732.128 kb on - strand, within CA264_03135 at 732.293 kb on + strand, within CA264_03135 at 732.294 kb on - strand, within CA264_03135 at 732.294 kb on - strand, within CA264_03135 at 732.308 kb on - strand, within CA264_03135 at 732.308 kb on - strand, within CA264_03135 at 732.334 kb on + strand, within CA264_03135 at 732.401 kb on + strand, within CA264_03135 at 732.530 kb on + strand at 732.536 kb on - strand at 732.566 kb on + strand at 732.589 kb on - strand at 732.594 kb on - strand at 732.594 kb on - strand at 732.594 kb on - strand at 732.594 kb on - strand at 732.595 kb on + strand at 732.596 kb on - strand at 732.596 kb on - strand at 732.614 kb on + strand at 732.615 kb on - strand at 732.617 kb on - strand at 732.617 kb on - strand at 732.617 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 729,547 + CA264_03125 0.40 -0.8 729,632 - CA264_03125 0.46 +0.5 729,632 - CA264_03125 0.46 +1.0 729,632 - CA264_03125 0.46 -0.6 729,638 - CA264_03125 0.46 +0.3 729,638 - CA264_03125 0.46 +0.3 729,721 + CA264_03125 0.52 +0.4 729,725 + CA264_03125 0.53 +0.0 729,726 - CA264_03125 0.53 +0.1 729,747 - CA264_03125 0.54 -0.9 729,747 - CA264_03125 0.54 +0.5 729,749 - CA264_03125 0.54 -0.2 730,106 - CA264_03125 0.80 -0.6 730,157 - CA264_03125 0.84 -0.2 730,264 - -0.1 730,330 + -0.3 730,458 - +0.2 730,458 - +0.1 730,532 - +0.4 730,545 + -0.1 730,545 + +0.2 730,545 + -0.3 730,546 - -0.9 730,555 - -0.8 730,560 - -0.1 730,628 + +0.0 730,647 + -0.2 730,762 - CA264_03130 0.20 +0.3 730,954 + CA264_03130 0.37 -0.3 730,985 + CA264_03130 0.40 -1.0 731,037 + CA264_03130 0.45 -0.5 731,038 - CA264_03130 0.45 -0.5 731,041 + CA264_03130 0.45 +0.1 731,041 + CA264_03130 0.45 -0.0 731,041 + CA264_03130 0.45 +0.6 731,042 - CA264_03130 0.45 -0.1 731,042 - CA264_03130 0.45 -1.2 731,042 - CA264_03130 0.45 -0.2 731,059 + CA264_03130 0.47 -1.2 731,060 - CA264_03130 0.47 -0.1 731,121 + CA264_03130 0.52 -2.2 731,121 + CA264_03130 0.52 -0.8 731,121 + CA264_03130 0.52 -1.2 731,275 - CA264_03130 0.66 -0.5 731,286 + CA264_03130 0.67 -0.8 731,287 - CA264_03130 0.67 -0.3 731,287 - CA264_03130 0.67 -0.8 731,287 - CA264_03130 0.67 -0.4 731,338 + CA264_03130 0.72 -0.5 731,371 - CA264_03130 0.75 -0.0 731,395 - CA264_03130 0.77 -0.1 731,687 - -1.0 731,687 - -0.3 731,689 - +0.0 731,764 - -0.2 731,885 - CA264_03135 0.21 -0.3 731,885 - CA264_03135 0.21 -0.3 732,058 + CA264_03135 0.42 -0.1 732,128 - CA264_03135 0.50 -0.2 732,293 + CA264_03135 0.70 +0.2 732,294 - CA264_03135 0.71 -2.0 732,294 - CA264_03135 0.71 +0.6 732,308 - CA264_03135 0.72 -0.2 732,308 - CA264_03135 0.72 -0.7 732,334 + CA264_03135 0.75 -0.9 732,401 + CA264_03135 0.83 -0.2 732,530 + +0.6 732,536 - +0.7 732,566 + +0.3 732,589 - +0.4 732,594 - -0.6 732,594 - -0.9 732,594 - -0.2 732,594 - +0.2 732,595 + +0.2 732,596 - +1.0 732,596 - +0.3 732,614 + +0.9 732,615 - +0.1 732,617 - -0.1 732,617 - -0.0 732,617 - +0.3
Or see this region's nucleotide sequence