Experiment: m.b. Chloride 500 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00205 and CA264_00210 are separated by 327 nucleotides CA264_00210 and CA264_00215 are separated by 78 nucleotides CA264_00215 and CA264_00220 are separated by 32 nucleotides
CA264_00205: CA264_00205 - histidine kinase, at 52,104 to 53,585
_00205
CA264_00210: CA264_00210 - glycine cleavage system protein T, at 53,913 to 55,001
_00210
CA264_00215: CA264_00215 - 2-phosphosulfolactate phosphatase, at 55,080 to 55,802
_00215
CA264_00220: CA264_00220 - pyrophosphatase, at 55,835 to 56,161
_00220
Position (kb) 53
54
55
56 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 52.932 kb on + strand, within CA264_00205 at 52.933 kb on - strand, within CA264_00205 at 52.958 kb on + strand, within CA264_00205 at 52.958 kb on + strand, within CA264_00205 at 52.959 kb on - strand, within CA264_00205 at 52.959 kb on - strand, within CA264_00205 at 52.963 kb on + strand, within CA264_00205 at 52.964 kb on - strand, within CA264_00205 at 52.964 kb on - strand, within CA264_00205 at 52.964 kb on - strand, within CA264_00205 at 52.966 kb on + strand, within CA264_00205 at 52.966 kb on + strand, within CA264_00205 at 53.034 kb on + strand, within CA264_00205 at 53.035 kb on - strand, within CA264_00205 at 53.036 kb on + strand, within CA264_00205 at 53.036 kb on + strand, within CA264_00205 at 53.036 kb on + strand, within CA264_00205 at 53.036 kb on + strand, within CA264_00205 at 53.045 kb on + strand, within CA264_00205 at 53.182 kb on - strand, within CA264_00205 at 53.227 kb on + strand, within CA264_00205 at 53.227 kb on + strand, within CA264_00205 at 53.354 kb on - strand, within CA264_00205 at 53.423 kb on + strand, within CA264_00205 at 53.423 kb on + strand, within CA264_00205 at 53.454 kb on + strand at 53.589 kb on + strand at 53.589 kb on + strand at 53.605 kb on - strand at 53.643 kb on + strand at 53.643 kb on + strand at 53.644 kb on - strand at 53.646 kb on - strand at 53.646 kb on - strand at 53.681 kb on + strand at 53.738 kb on - strand at 53.743 kb on + strand at 53.743 kb on + strand at 53.743 kb on + strand at 53.743 kb on + strand at 53.744 kb on - strand at 53.744 kb on - strand at 53.744 kb on - strand at 53.744 kb on - strand at 53.744 kb on - strand at 53.763 kb on + strand at 53.763 kb on + strand at 53.763 kb on + strand at 53.764 kb on - strand at 53.764 kb on - strand at 53.771 kb on - strand at 53.787 kb on - strand at 53.787 kb on - strand at 53.787 kb on - strand at 54.962 kb on - strand at 54.986 kb on + strand at 54.986 kb on + strand at 54.993 kb on - strand at 55.037 kb on - strand at 55.091 kb on - strand at 55.091 kb on - strand at 55.774 kb on + strand at 55.858 kb on + strand at 55.962 kb on - strand, within CA264_00220 at 55.962 kb on - strand, within CA264_00220
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloride 500 mM remove 52,932 + CA264_00205 0.56 -0.5 52,933 - CA264_00205 0.56 +0.9 52,958 + CA264_00205 0.58 +0.0 52,958 + CA264_00205 0.58 -0.5 52,959 - CA264_00205 0.58 -0.3 52,959 - CA264_00205 0.58 -0.0 52,963 + CA264_00205 0.58 -0.1 52,964 - CA264_00205 0.58 -0.6 52,964 - CA264_00205 0.58 +0.2 52,964 - CA264_00205 0.58 +0.2 52,966 + CA264_00205 0.58 +0.1 52,966 + CA264_00205 0.58 +0.6 53,034 + CA264_00205 0.63 -0.1 53,035 - CA264_00205 0.63 -1.7 53,036 + CA264_00205 0.63 -0.0 53,036 + CA264_00205 0.63 +1.2 53,036 + CA264_00205 0.63 -0.9 53,036 + CA264_00205 0.63 +0.5 53,045 + CA264_00205 0.63 +0.0 53,182 - CA264_00205 0.73 -1.8 53,227 + CA264_00205 0.76 -0.1 53,227 + CA264_00205 0.76 +0.7 53,354 - CA264_00205 0.84 +0.6 53,423 + CA264_00205 0.89 -0.4 53,423 + CA264_00205 0.89 -0.3 53,454 + -0.5 53,589 + +0.4 53,589 + -0.4 53,605 - -0.0 53,643 + +0.3 53,643 + -1.4 53,644 - -0.2 53,646 - -1.0 53,646 - -0.6 53,681 + -1.0 53,738 - +0.1 53,743 + -0.4 53,743 + -0.0 53,743 + -0.0 53,743 + -0.3 53,744 - -0.1 53,744 - -0.4 53,744 - +0.3 53,744 - -0.7 53,744 - -0.0 53,763 + +0.5 53,763 + -0.4 53,763 + -1.0 53,764 - +0.8 53,764 - -2.9 53,771 - +0.1 53,787 - -0.8 53,787 - +0.3 53,787 - +0.3 54,962 - -0.1 54,986 + +0.1 54,986 + -0.1 54,993 - -0.7 55,037 - -0.0 55,091 - -0.9 55,091 - -0.4 55,774 + -0.2 55,858 + -0.0 55,962 - CA264_00220 0.39 -1.0 55,962 - CA264_00220 0.39 -0.4
Or see this region's nucleotide sequence