Strain Fitness in Rhizobium sp. OAE497 around ABIE40_RS26950

Experiment: 4-Hydroxybenzoic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	4-Hydroxybenzoic Acid (C)
104,985	+		ABIE40_RS26940	0.70	+0.5
105,004	+		ABIE40_RS26940	0.74	-0.4
105,005	-		ABIE40_RS26940	0.74	+1.8
105,005	-		ABIE40_RS26940	0.74	-1.7
105,014	+		ABIE40_RS26940	0.76	+0.0
105,015	-		ABIE40_RS26940	0.77	-0.3
105,270	+				+0.6
105,270	+				+1.9
105,270	+				+1.1
105,274	+				-0.9
105,275	-				+1.7
105,275	-				-0.1
105,275	-				+0.1
105,275	-				+3.7
105,275	-				-0.6
105,275	-				+3.7
105,283	+				+0.1
105,309	-				+0.5
105,364	+		ABIE40_RS26945	0.19	-0.7
105,364	+		ABIE40_RS26945	0.19	-1.4
105,365	-		ABIE40_RS26945	0.19	-0.4
105,365	-		ABIE40_RS26945	0.19	+0.6
105,365	-		ABIE40_RS26945	0.19	+0.4
105,365	-		ABIE40_RS26945	0.19	+0.5
105,412	+		ABIE40_RS26945	0.34	+0.3
105,412	+		ABIE40_RS26945	0.34	+0.1
105,413	-		ABIE40_RS26945	0.35	-0.5
105,419	+		ABIE40_RS26945	0.37	-1.0
105,645	+				-0.1
105,691	+				+0.1
105,691	+				-0.5
105,704	+				-0.1
105,705	-				+0.1
105,745	-				-1.0
105,745	-				+0.4
105,783	+				+2.3
105,784	-				-1.5
105,784	-				-0.7
105,784	-				-0.5
105,871	+				-1.4
105,907	+				-0.4
105,907	+				-0.5
105,907	+				+0.2
105,908	-				+1.1
105,911	+				+0.7
105,911	+				+0.2
105,912	-				+0.2
105,912	-				+0.3
105,912	-				-0.1
105,912	-				-2.5
105,912	-				+0.2
105,912	-				-0.7
106,004	+				+0.8
106,004	+				+0.9
106,004	+				-1.1
106,004	+				+0.4
106,005	-				+0.3
106,041	+				-0.5
106,050	+				-0.6
106,051	-				+0.1
106,102	-		ABIE40_RS26950	0.12	-0.6
106,102	-		ABIE40_RS26950	0.12	-0.2
106,222	+		ABIE40_RS26950	0.17	-0.6
106,237	+		ABIE40_RS26950	0.18	+2.2
106,238	-		ABIE40_RS26950	0.18	-0.1
106,238	-		ABIE40_RS26950	0.18	-1.0
106,272	+		ABIE40_RS26950	0.20	+1.3
106,278	-		ABIE40_RS26950	0.20	+0.0
106,278	-		ABIE40_RS26950	0.20	+0.6
106,278	-		ABIE40_RS26950	0.20	+1.2
106,489	+		ABIE40_RS26950	0.29	-0.4
106,490	-		ABIE40_RS26950	0.29	+0.7
106,532	-		ABIE40_RS26950	0.31	-1.1
106,554	+		ABIE40_RS26950	0.32	-0.4
106,571	-		ABIE40_RS26950	0.33	+1.9
106,571	-		ABIE40_RS26950	0.33	+0.1
106,571	-		ABIE40_RS26950	0.33	+0.6
106,607	+		ABIE40_RS26950	0.35	+0.7
106,608	-		ABIE40_RS26950	0.35	+0.7
106,646	+		ABIE40_RS26950	0.36	-0.8
106,711	-		ABIE40_RS26950	0.39	-0.6
106,852	+		ABIE40_RS26950	0.46	-0.3
106,888	-		ABIE40_RS26950	0.47	-0.5
106,888	-		ABIE40_RS26950	0.47	+0.1
106,888	-		ABIE40_RS26950	0.47	+0.2
106,908	+		ABIE40_RS26950	0.48	-2.2
107,010	+		ABIE40_RS26950	0.53	-0.5
107,011	-		ABIE40_RS26950	0.53	-0.5
107,015	-		ABIE40_RS26950	0.53	+0.1
107,059	+		ABIE40_RS26950	0.55	+0.2
107,228	+		ABIE40_RS26950	0.62	+1.0
107,228	+		ABIE40_RS26950	0.62	+1.4
107,228	+		ABIE40_RS26950	0.62	+1.1
107,250	+		ABIE40_RS26950	0.63	+1.0
107,385	+		ABIE40_RS26950	0.69	+2.4
107,385	+		ABIE40_RS26950	0.69	-0.1
107,385	+		ABIE40_RS26950	0.69	+0.2
107,386	-		ABIE40_RS26950	0.69	+1.9
107,386	-		ABIE40_RS26950	0.69	+0.1
107,386	-		ABIE40_RS26950	0.69	-0.3
107,386	-		ABIE40_RS26950	0.69	+0.0
107,531	+		ABIE40_RS26950	0.76	+0.3
107,532	-		ABIE40_RS26950	0.76	-1.2
107,683	+		ABIE40_RS26950	0.83	+0.1
107,684	-		ABIE40_RS26950	0.83	-1.0
107,684	-		ABIE40_RS26950	0.83	+0.1
107,699	+		ABIE40_RS26950	0.84	+0.9
107,750	+		ABIE40_RS26950	0.86	-1.8
107,750	+		ABIE40_RS26950	0.86	+0.2
107,751	-		ABIE40_RS26950	0.86	-1.1
107,836	+		ABIE40_RS26950	0.90	-0.5
107,836	+		ABIE40_RS26950	0.90	-2.7
107,843	-				-1.1
107,843	-				-0.8
107,933	+				+0.3
107,934	-				+0.7
108,249	-				+0.1
108,340	+				+0.4
108,340	+				-0.6
108,340	+				-0.5
108,341	-				-0.7
108,341	-				+0.5
108,341	-				-0.3
108,341	-				-1.4
108,384	+				-0.7
108,385	-				+0.7
108,385	-				-0.2
108,385	-				-0.4
108,385	-				-0.5
108,385	-				+0.5
108,385	-				-0.2
108,385	-				-0.3
108,438	+				-0.3
108,445	+				-1.7
108,445	+				+0.6
108,445	+				+0.1
108,446	-				+1.4
108,572	+		ABIE40_RS26955	0.17	-2.6
108,573	-		ABIE40_RS26955	0.17	-1.0
108,573	-		ABIE40_RS26955	0.17	+1.4
108,573	-		ABIE40_RS26955	0.17	-0.8
108,573	-		ABIE40_RS26955	0.17	+1.0
108,573	-		ABIE40_RS26955	0.17	-0.4
108,573	-		ABIE40_RS26955	0.17	-0.3
108,575	-		ABIE40_RS26955	0.17	-0.8
108,580	+		ABIE40_RS26955	0.18	+0.0
108,580	+		ABIE40_RS26955	0.18	+0.1
108,581	-		ABIE40_RS26955	0.19	+0.3
108,584	+		ABIE40_RS26955	0.19	-0.5
108,604	+		ABIE40_RS26955	0.23	-1.3
108,604	+		ABIE40_RS26955	0.23	+0.1
108,604	+		ABIE40_RS26955	0.23	+0.0
108,605	-		ABIE40_RS26955	0.23	+1.4
108,658	+		ABIE40_RS26955	0.32	-1.0
108,658	+		ABIE40_RS26955	0.32	-0.6
108,689	+		ABIE40_RS26955	0.38	-0.2
108,727	+		ABIE40_RS26955	0.44	-1.1
108,746	+		ABIE40_RS26955	0.48	+0.5
108,747	-		ABIE40_RS26955	0.48	-2.0
108,760	+		ABIE40_RS26955	0.50	-0.0
108,760	+		ABIE40_RS26955	0.50	+1.2
108,885	+		ABIE40_RS26955	0.72	-0.1
108,885	+		ABIE40_RS26955	0.72	+1.5
108,886	-		ABIE40_RS26955	0.72	-0.3
108,886	-		ABIE40_RS26955	0.72	+0.8
108,920	+		ABIE40_RS26955	0.78	+1.9
108,960	+		ABIE40_RS26955	0.85	+0.1
108,960	+		ABIE40_RS26955	0.85	+0.4
108,960	+		ABIE40_RS26955	0.85	-0.1
108,960	+		ABIE40_RS26955	0.85	-1.4
108,960	+		ABIE40_RS26955	0.85	-0.5
108,960	+		ABIE40_RS26955	0.85	+0.3
108,961	-		ABIE40_RS26955	0.86	-0.3
108,961	-		ABIE40_RS26955	0.86	-1.4
108,961	-		ABIE40_RS26955	0.86	-0.9
108,961	-		ABIE40_RS26955	0.86	-1.8
109,014	+				+0.4
109,014	+				-0.1
109,015	-				+0.0
109,026	+				+0.4
109,026	+				+1.2
109,027	-				-1.2