Experiment: D-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS26835 and ABID97_RS26840 are separated by 270 nucleotides ABID97_RS26840 and ABID97_RS26845 are separated by 286 nucleotides ABID97_RS26845 and ABID97_RS26850 are separated by 20 nucleotides
ABID97_RS26835: ABID97_RS26835 - DUF1629 domain-containing protein, at 290,104 to 290,682
_RS26835
ABID97_RS26840: ABID97_RS26840 - hypothetical protein, at 290,953 to 291,168
_RS26840
ABID97_RS26845: ABID97_RS26845 - carotenoid oxygenase family protein, at 291,455 to 292,885
_RS26845
ABID97_RS26850: ABID97_RS26850 - MerR family transcriptional regulator, at 292,906 to 293,946
_RS26850
Position (kb) 291
292
293 Strain fitness (log2 ratio) -1
0
1 at 290.884 kb on + strand at 290.885 kb on - strand at 291.139 kb on - strand, within ABID97_RS26840 at 291.178 kb on + strand at 291.736 kb on - strand, within ABID97_RS26845 at 292.735 kb on - strand, within ABID97_RS26845 at 292.953 kb on - strand at 293.232 kb on - strand, within ABID97_RS26850 at 293.337 kb on - strand, within ABID97_RS26850 at 293.752 kb on + strand, within ABID97_RS26850
Per-strain Table
Position Strand Gene LocusTag Fraction D-Serine (C) remove 290,884 + -0.8 290,885 - -1.2 291,139 - ABID97_RS26840 0.86 -0.6 291,178 + -0.0 291,736 - ABID97_RS26845 0.20 -0.9 292,735 - ABID97_RS26845 0.89 +0.1 292,953 - -0.5 293,232 - ABID97_RS26850 0.31 -0.2 293,337 - ABID97_RS26850 0.41 -0.0 293,752 + ABID97_RS26850 0.81 -0.2
Or see this region's nucleotide sequence