Experiment: D-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS21205 and ABID97_RS21210 are separated by 39 nucleotides ABID97_RS21210 and ABID97_RS21215 overlap by 4 nucleotides ABID97_RS21215 and ABID97_RS21220 are separated by 44 nucleotides
ABID97_RS21205: ABID97_RS21205 - IlvD/Edd family dehydratase, at 4,377,795 to 4,379,531
_RS21205
ABID97_RS21210: ABID97_RS21210 - 2-dehydro-3-deoxygalactonokinase, at 4,379,571 to 4,380,479
_RS21210
ABID97_RS21215: ABID97_RS21215 - 2-dehydro-3-deoxy-6-phosphogalactonate aldolase, at 4,380,476 to 4,381,117
_RS21215
ABID97_RS21220: ABID97_RS21220 - aldolase, at 4,381,162 to 4,381,899
_RS21220
Position (kb) 4379
4380
4381 Strain fitness (log2 ratio) -1
0
1
2 at 4378.770 kb on + strand, within ABID97_RS21205 at 4378.771 kb on - strand, within ABID97_RS21205 at 4378.771 kb on - strand, within ABID97_RS21205 at 4378.813 kb on - strand, within ABID97_RS21205 at 4378.881 kb on + strand, within ABID97_RS21205 at 4378.882 kb on - strand, within ABID97_RS21205 at 4379.246 kb on + strand, within ABID97_RS21205 at 4379.439 kb on + strand at 4379.439 kb on + strand at 4379.439 kb on + strand at 4380.082 kb on - strand, within ABID97_RS21210 at 4380.264 kb on + strand, within ABID97_RS21210 at 4380.363 kb on + strand, within ABID97_RS21210 at 4380.366 kb on - strand, within ABID97_RS21210 at 4380.719 kb on + strand, within ABID97_RS21215 at 4380.720 kb on - strand, within ABID97_RS21215 at 4381.035 kb on - strand, within ABID97_RS21215
Per-strain Table
Position Strand Gene LocusTag Fraction D-Serine (C) remove 4,378,770 + ABID97_RS21205 0.56 -0.3 4,378,771 - ABID97_RS21205 0.56 -0.7 4,378,771 - ABID97_RS21205 0.56 +0.4 4,378,813 - ABID97_RS21205 0.59 +0.0 4,378,881 + ABID97_RS21205 0.63 +1.5 4,378,882 - ABID97_RS21205 0.63 +0.0 4,379,246 + ABID97_RS21205 0.84 -0.8 4,379,439 + -0.2 4,379,439 + -1.4 4,379,439 + -0.7 4,380,082 - ABID97_RS21210 0.56 +0.6 4,380,264 + ABID97_RS21210 0.76 +0.1 4,380,363 + ABID97_RS21210 0.87 +2.3 4,380,366 - ABID97_RS21210 0.87 -0.6 4,380,719 + ABID97_RS21215 0.38 +0.0 4,380,720 - ABID97_RS21215 0.38 +0.2 4,381,035 - ABID97_RS21215 0.87 +0.2
Or see this region's nucleotide sequence