Experiment: D-Serine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS20935 and ABID97_RS20940 are separated by 242 nucleotides ABID97_RS20940 and ABID97_RS20945 are separated by 114 nucleotides ABID97_RS20945 and ABID97_RS20950 overlap by 14 nucleotides
ABID97_RS20935: ABID97_RS20935 - ribosome biogenesis GTPase YlqF, at 4,330,033 to 4,331,007
_RS20935
ABID97_RS20940: ABID97_RS20940 - CBS domain-containing protein, at 4,331,250 to 4,331,678
_RS20940
ABID97_RS20945: ABID97_RS20945 - HPF/RaiA family ribosome-associated protein, at 4,331,793 to 4,332,152
_RS20945
ABID97_RS20950: ABID97_RS20950 - alpha/beta hydrolase, at 4,332,139 to 4,333,275
_RS20950
Position (kb) 4331
4332
4333 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4331.091 kb on + strand at 4331.091 kb on + strand at 4331.092 kb on - strand at 4331.092 kb on - strand at 4331.415 kb on + strand, within ABID97_RS20940 at 4331.416 kb on - strand, within ABID97_RS20940 at 4331.664 kb on + strand at 4331.664 kb on + strand at 4331.664 kb on + strand at 4331.664 kb on + strand at 4331.665 kb on - strand at 4331.665 kb on - strand at 4331.665 kb on - strand at 4331.666 kb on + strand at 4331.667 kb on - strand at 4331.667 kb on - strand at 4331.667 kb on - strand at 4331.676 kb on + strand at 4331.677 kb on - strand at 4331.677 kb on - strand at 4331.729 kb on - strand at 4332.377 kb on + strand, within ABID97_RS20950 at 4332.378 kb on - strand, within ABID97_RS20950 at 4332.378 kb on - strand, within ABID97_RS20950 at 4332.378 kb on - strand, within ABID97_RS20950 at 4332.402 kb on - strand, within ABID97_RS20950 at 4332.449 kb on + strand, within ABID97_RS20950 at 4332.450 kb on - strand, within ABID97_RS20950 at 4332.450 kb on - strand, within ABID97_RS20950 at 4332.557 kb on + strand, within ABID97_RS20950 at 4332.557 kb on + strand, within ABID97_RS20950 at 4332.558 kb on - strand, within ABID97_RS20950 at 4332.558 kb on - strand, within ABID97_RS20950 at 4332.558 kb on - strand, within ABID97_RS20950 at 4332.558 kb on - strand, within ABID97_RS20950 at 4332.558 kb on - strand, within ABID97_RS20950 at 4332.558 kb on - strand, within ABID97_RS20950 at 4332.558 kb on - strand, within ABID97_RS20950 at 4332.558 kb on - strand, within ABID97_RS20950 at 4332.560 kb on + strand, within ABID97_RS20950 at 4332.560 kb on + strand, within ABID97_RS20950 at 4332.560 kb on + strand, within ABID97_RS20950 at 4332.560 kb on + strand, within ABID97_RS20950 at 4332.561 kb on - strand, within ABID97_RS20950 at 4332.561 kb on - strand, within ABID97_RS20950 at 4332.561 kb on - strand, within ABID97_RS20950 at 4332.561 kb on - strand, within ABID97_RS20950 at 4332.561 kb on - strand, within ABID97_RS20950 at 4332.561 kb on - strand, within ABID97_RS20950 at 4332.647 kb on + strand, within ABID97_RS20950 at 4332.648 kb on - strand, within ABID97_RS20950 at 4332.719 kb on + strand, within ABID97_RS20950 at 4332.722 kb on + strand, within ABID97_RS20950 at 4332.723 kb on - strand, within ABID97_RS20950 at 4332.723 kb on - strand, within ABID97_RS20950 at 4332.723 kb on - strand, within ABID97_RS20950 at 4332.723 kb on - strand, within ABID97_RS20950 at 4332.723 kb on - strand, within ABID97_RS20950 at 4332.974 kb on - strand, within ABID97_RS20950 at 4333.115 kb on + strand, within ABID97_RS20950 at 4333.115 kb on + strand, within ABID97_RS20950 at 4333.115 kb on + strand, within ABID97_RS20950 at 4333.116 kb on - strand, within ABID97_RS20950 at 4333.116 kb on - strand, within ABID97_RS20950
Per-strain Table
Position Strand Gene LocusTag Fraction D-Serine (C) remove 4,331,091 + +0.2 4,331,091 + +0.3 4,331,092 - -0.1 4,331,092 - -0.4 4,331,415 + ABID97_RS20940 0.38 -1.4 4,331,416 - ABID97_RS20940 0.39 -2.6 4,331,664 + -0.6 4,331,664 + +0.3 4,331,664 + +0.0 4,331,664 + -1.0 4,331,665 - +0.4 4,331,665 - -0.4 4,331,665 - +2.1 4,331,666 + -0.7 4,331,667 - +1.0 4,331,667 - -0.1 4,331,667 - -0.6 4,331,676 + -0.1 4,331,677 - -1.1 4,331,677 - -1.5 4,331,729 - +0.0 4,332,377 + ABID97_RS20950 0.21 -1.4 4,332,378 - ABID97_RS20950 0.21 -0.0 4,332,378 - ABID97_RS20950 0.21 -0.2 4,332,378 - ABID97_RS20950 0.21 -0.5 4,332,402 - ABID97_RS20950 0.23 +0.6 4,332,449 + ABID97_RS20950 0.27 -0.3 4,332,450 - ABID97_RS20950 0.27 -0.9 4,332,450 - ABID97_RS20950 0.27 -0.0 4,332,557 + ABID97_RS20950 0.37 +0.1 4,332,557 + ABID97_RS20950 0.37 +1.3 4,332,558 - ABID97_RS20950 0.37 -0.6 4,332,558 - ABID97_RS20950 0.37 +0.1 4,332,558 - ABID97_RS20950 0.37 -0.0 4,332,558 - ABID97_RS20950 0.37 -0.2 4,332,558 - ABID97_RS20950 0.37 -0.1 4,332,558 - ABID97_RS20950 0.37 +0.5 4,332,558 - ABID97_RS20950 0.37 +1.7 4,332,558 - ABID97_RS20950 0.37 +0.3 4,332,560 + ABID97_RS20950 0.37 -0.4 4,332,560 + ABID97_RS20950 0.37 -0.0 4,332,560 + ABID97_RS20950 0.37 +1.3 4,332,560 + ABID97_RS20950 0.37 -0.0 4,332,561 - ABID97_RS20950 0.37 -0.4 4,332,561 - ABID97_RS20950 0.37 -1.3 4,332,561 - ABID97_RS20950 0.37 -1.0 4,332,561 - ABID97_RS20950 0.37 +1.7 4,332,561 - ABID97_RS20950 0.37 -0.4 4,332,561 - ABID97_RS20950 0.37 -0.1 4,332,647 + ABID97_RS20950 0.45 -0.4 4,332,648 - ABID97_RS20950 0.45 -0.1 4,332,719 + ABID97_RS20950 0.51 -0.3 4,332,722 + ABID97_RS20950 0.51 -0.2 4,332,723 - ABID97_RS20950 0.51 +0.3 4,332,723 - ABID97_RS20950 0.51 +0.1 4,332,723 - ABID97_RS20950 0.51 +0.3 4,332,723 - ABID97_RS20950 0.51 -0.2 4,332,723 - ABID97_RS20950 0.51 -0.2 4,332,974 - ABID97_RS20950 0.73 -0.9 4,333,115 + ABID97_RS20950 0.86 -0.1 4,333,115 + ABID97_RS20950 0.86 +0.0 4,333,115 + ABID97_RS20950 0.86 -0.4 4,333,116 - ABID97_RS20950 0.86 +0.7 4,333,116 - ABID97_RS20950 0.86 -0.5
Or see this region's nucleotide sequence