Experiment: Cisplatin 0.0125 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_848 and PfGW456L13_849 are separated by 490 nucleotides PfGW456L13_849 and PfGW456L13_850 are separated by 7 nucleotides PfGW456L13_850 and PfGW456L13_851 are separated by 194 nucleotides PfGW456L13_851 and PfGW456L13_852 are separated by 209 nucleotides
PfGW456L13_848 - Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly, at 953,906 to 954,238
_848
PfGW456L13_849 - Regulator of nucleoside diphosphate kinase, at 954,729 to 955,139
_849
PfGW456L13_850 - Adenylate cyclase (EC 4.6.1.1), at 955,147 to 957,990
_850
PfGW456L13_851 - DNA-binding protein inhibitor Id-2-related protein, at 958,185 to 958,430
_851
PfGW456L13_852 - FIG00954215: hypothetical protein, at 958,640 to 958,924
_852
Position (kb) 955
956
957
958 Strain fitness (log2 ratio) -2
-1
0
1 at 954.190 kb on + strand, within PfGW456L13_848 at 954.190 kb on + strand, within PfGW456L13_848 at 954.191 kb on - strand, within PfGW456L13_848 at 954.191 kb on - strand, within PfGW456L13_848 at 954.283 kb on - strand at 954.283 kb on - strand at 954.380 kb on + strand at 954.380 kb on + strand at 954.381 kb on - strand at 954.381 kb on - strand at 954.381 kb on - strand at 954.413 kb on + strand at 954.413 kb on + strand at 954.414 kb on - strand at 954.460 kb on - strand at 954.460 kb on - strand at 954.573 kb on + strand at 954.573 kb on + strand at 954.573 kb on + strand at 954.573 kb on + strand at 954.574 kb on - strand at 954.574 kb on - strand at 954.608 kb on - strand at 954.608 kb on - strand at 954.610 kb on - strand at 954.627 kb on - strand at 954.939 kb on + strand, within PfGW456L13_849 at 954.940 kb on - strand, within PfGW456L13_849 at 954.940 kb on - strand, within PfGW456L13_849 at 954.940 kb on - strand, within PfGW456L13_849 at 955.205 kb on + strand at 955.205 kb on + strand at 955.206 kb on - strand at 955.206 kb on - strand at 955.206 kb on - strand at 955.206 kb on - strand at 955.265 kb on + strand at 955.265 kb on + strand at 955.265 kb on + strand at 955.265 kb on + strand at 955.265 kb on + strand at 955.265 kb on + strand at 955.266 kb on - strand at 955.266 kb on - strand at 955.266 kb on - strand at 955.266 kb on - strand at 955.266 kb on - strand at 955.266 kb on - strand at 955.266 kb on - strand at 955.374 kb on - strand at 955.374 kb on - strand at 955.374 kb on - strand at 955.430 kb on + strand at 955.430 kb on + strand at 955.430 kb on + strand at 955.430 kb on + strand at 955.430 kb on + strand at 955.517 kb on + strand, within PfGW456L13_850 at 955.517 kb on + strand, within PfGW456L13_850 at 955.517 kb on + strand, within PfGW456L13_850 at 955.577 kb on + strand, within PfGW456L13_850 at 955.679 kb on + strand, within PfGW456L13_850 at 955.679 kb on + strand, within PfGW456L13_850 at 955.679 kb on + strand, within PfGW456L13_850 at 955.679 kb on + strand, within PfGW456L13_850 at 955.679 kb on + strand, within PfGW456L13_850 at 955.680 kb on - strand, within PfGW456L13_850 at 955.680 kb on - strand, within PfGW456L13_850 at 955.680 kb on - strand, within PfGW456L13_850 at 955.680 kb on - strand, within PfGW456L13_850 at 955.680 kb on - strand, within PfGW456L13_850 at 955.680 kb on - strand, within PfGW456L13_850 at 955.708 kb on - strand, within PfGW456L13_850 at 955.709 kb on + strand, within PfGW456L13_850 at 955.709 kb on + strand, within PfGW456L13_850 at 955.709 kb on + strand, within PfGW456L13_850 at 955.709 kb on + strand, within PfGW456L13_850 at 955.709 kb on + strand, within PfGW456L13_850 at 955.709 kb on + strand, within PfGW456L13_850 at 955.709 kb on + strand, within PfGW456L13_850 at 955.709 kb on + strand, within PfGW456L13_850 at 955.709 kb on + strand, within PfGW456L13_850 at 955.709 kb on + strand, within PfGW456L13_850 at 955.709 kb on + strand, within PfGW456L13_850 at 955.710 kb on - strand, within PfGW456L13_850 at 955.710 kb on - strand, within PfGW456L13_850 at 955.710 kb on - strand, within PfGW456L13_850 at 955.802 kb on + strand, within PfGW456L13_850 at 955.802 kb on + strand, within PfGW456L13_850 at 955.802 kb on + strand, within PfGW456L13_850 at 955.802 kb on + strand, within PfGW456L13_850 at 955.898 kb on + strand, within PfGW456L13_850 at 955.898 kb on + strand, within PfGW456L13_850 at 955.899 kb on - strand, within PfGW456L13_850 at 955.899 kb on - strand, within PfGW456L13_850 at 955.899 kb on - strand, within PfGW456L13_850 at 955.899 kb on - strand, within PfGW456L13_850 at 956.069 kb on + strand, within PfGW456L13_850 at 956.070 kb on - strand, within PfGW456L13_850 at 956.189 kb on + strand, within PfGW456L13_850 at 956.190 kb on - strand, within PfGW456L13_850 at 956.190 kb on - strand, within PfGW456L13_850 at 956.540 kb on + strand, within PfGW456L13_850 at 956.540 kb on + strand, within PfGW456L13_850 at 956.541 kb on - strand, within PfGW456L13_850 at 956.541 kb on - strand, within PfGW456L13_850 at 956.649 kb on + strand, within PfGW456L13_850 at 956.675 kb on + strand, within PfGW456L13_850 at 956.768 kb on + strand, within PfGW456L13_850 at 956.768 kb on + strand, within PfGW456L13_850 at 956.768 kb on + strand, within PfGW456L13_850 at 956.769 kb on - strand, within PfGW456L13_850 at 956.769 kb on - strand, within PfGW456L13_850 at 956.769 kb on - strand, within PfGW456L13_850 at 956.769 kb on - strand, within PfGW456L13_850 at 956.769 kb on - strand, within PfGW456L13_850 at 956.769 kb on - strand, within PfGW456L13_850 at 956.769 kb on - strand, within PfGW456L13_850 at 956.769 kb on - strand, within PfGW456L13_850 at 956.955 kb on - strand, within PfGW456L13_850 at 956.955 kb on - strand, within PfGW456L13_850 at 956.955 kb on - strand, within PfGW456L13_850 at 957.009 kb on - strand, within PfGW456L13_850 at 957.009 kb on - strand, within PfGW456L13_850 at 957.009 kb on - strand, within PfGW456L13_850 at 957.009 kb on - strand, within PfGW456L13_850 at 957.027 kb on - strand, within PfGW456L13_850 at 957.038 kb on + strand, within PfGW456L13_850 at 957.038 kb on + strand, within PfGW456L13_850 at 957.038 kb on + strand, within PfGW456L13_850 at 957.038 kb on + strand, within PfGW456L13_850 at 957.038 kb on + strand, within PfGW456L13_850 at 957.038 kb on + strand, within PfGW456L13_850 at 957.038 kb on + strand, within PfGW456L13_850 at 957.038 kb on + strand, within PfGW456L13_850 at 957.039 kb on - strand, within PfGW456L13_850 at 957.039 kb on - strand, within PfGW456L13_850 at 957.039 kb on - strand, within PfGW456L13_850 at 957.039 kb on - strand, within PfGW456L13_850 at 957.039 kb on - strand, within PfGW456L13_850 at 957.039 kb on - strand, within PfGW456L13_850 at 957.039 kb on - strand, within PfGW456L13_850 at 957.039 kb on - strand, within PfGW456L13_850 at 957.039 kb on - strand, within PfGW456L13_850 at 957.131 kb on + strand, within PfGW456L13_850 at 957.131 kb on + strand, within PfGW456L13_850 at 957.132 kb on - strand, within PfGW456L13_850 at 957.168 kb on - strand, within PfGW456L13_850 at 957.233 kb on + strand, within PfGW456L13_850 at 957.233 kb on + strand, within PfGW456L13_850 at 957.233 kb on + strand, within PfGW456L13_850 at 957.234 kb on - strand, within PfGW456L13_850 at 957.234 kb on - strand, within PfGW456L13_850 at 957.234 kb on - strand, within PfGW456L13_850 at 957.234 kb on - strand, within PfGW456L13_850 at 957.234 kb on - strand, within PfGW456L13_850 at 957.234 kb on - strand, within PfGW456L13_850 at 957.312 kb on - strand, within PfGW456L13_850 at 957.326 kb on + strand, within PfGW456L13_850 at 957.327 kb on - strand, within PfGW456L13_850 at 957.404 kb on + strand, within PfGW456L13_850 at 957.404 kb on + strand, within PfGW456L13_850 at 957.404 kb on + strand, within PfGW456L13_850 at 957.404 kb on + strand, within PfGW456L13_850 at 957.405 kb on - strand, within PfGW456L13_850 at 957.405 kb on - strand, within PfGW456L13_850 at 957.405 kb on - strand, within PfGW456L13_850 at 957.405 kb on - strand, within PfGW456L13_850 at 957.405 kb on - strand, within PfGW456L13_850 at 957.698 kb on + strand, within PfGW456L13_850 at 957.698 kb on + strand, within PfGW456L13_850 at 957.698 kb on + strand, within PfGW456L13_850 at 957.699 kb on - strand, within PfGW456L13_850 at 957.699 kb on - strand, within PfGW456L13_850 at 957.791 kb on + strand at 957.791 kb on + strand at 957.792 kb on - strand at 958.050 kb on - strand at 958.073 kb on - strand at 958.194 kb on + strand at 958.194 kb on + strand at 958.195 kb on - strand at 958.195 kb on - strand at 958.195 kb on - strand at 958.195 kb on - strand at 958.195 kb on - strand at 958.195 kb on - strand at 958.422 kb on - strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.430 kb on + strand at 958.431 kb on - strand at 958.431 kb on - strand at 958.431 kb on - strand at 958.431 kb on - strand at 958.431 kb on - strand at 958.431 kb on - strand at 958.431 kb on - strand at 958.431 kb on - strand at 958.449 kb on - strand at 958.529 kb on + strand at 958.530 kb on - strand at 958.530 kb on - strand at 958.570 kb on + strand at 958.571 kb on - strand at 958.623 kb on + strand at 958.624 kb on - strand at 958.641 kb on + strand at 958.642 kb on - strand at 958.690 kb on - strand, within PfGW456L13_852 at 958.785 kb on + strand, within PfGW456L13_852
Per-strain Table
Position Strand Gene LocusTag Fraction Cisplatin 0.0125 mg/ml remove 954,190 + PfGW456L13_848 0.85 -0.2 954,190 + PfGW456L13_848 0.85 +0.9 954,191 - PfGW456L13_848 0.86 -0.0 954,191 - PfGW456L13_848 0.86 +0.3 954,283 - +0.3 954,283 - +0.6 954,380 + +1.0 954,380 + -0.4 954,381 - +0.1 954,381 - -0.6 954,381 - +0.6 954,413 + +0.2 954,413 + -0.2 954,414 - +0.6 954,460 - +0.3 954,460 - -0.2 954,573 + -0.2 954,573 + -0.1 954,573 + -0.3 954,573 + +0.1 954,574 - -0.1 954,574 - +1.3 954,608 - -0.5 954,608 - -0.6 954,610 - -0.0 954,627 - -0.5 954,939 + PfGW456L13_849 0.51 +1.3 954,940 - PfGW456L13_849 0.51 +1.3 954,940 - PfGW456L13_849 0.51 -0.4 954,940 - PfGW456L13_849 0.51 +1.5 955,205 + -0.0 955,205 + -0.5 955,206 - -0.2 955,206 - -0.0 955,206 - +0.0 955,206 - -0.3 955,265 + -0.5 955,265 + +0.7 955,265 + -0.2 955,265 + +0.5 955,265 + -0.4 955,265 + -1.2 955,266 - -0.0 955,266 - +0.6 955,266 - -0.4 955,266 - -0.9 955,266 - +0.2 955,266 - +0.6 955,266 - -0.1 955,374 - +0.0 955,374 - +0.6 955,374 - -0.8 955,430 + -0.2 955,430 + +0.1 955,430 + +0.8 955,430 + -1.4 955,430 + -0.4 955,517 + PfGW456L13_850 0.13 -0.5 955,517 + PfGW456L13_850 0.13 +0.9 955,517 + PfGW456L13_850 0.13 +0.2 955,577 + PfGW456L13_850 0.15 +0.3 955,679 + PfGW456L13_850 0.19 -1.7 955,679 + PfGW456L13_850 0.19 -0.1 955,679 + PfGW456L13_850 0.19 -0.0 955,679 + PfGW456L13_850 0.19 -0.8 955,679 + PfGW456L13_850 0.19 +1.2 955,680 - PfGW456L13_850 0.19 +0.2 955,680 - PfGW456L13_850 0.19 +0.3 955,680 - PfGW456L13_850 0.19 +1.2 955,680 - PfGW456L13_850 0.19 +0.2 955,680 - PfGW456L13_850 0.19 +0.4 955,680 - PfGW456L13_850 0.19 +0.4 955,708 - PfGW456L13_850 0.20 +0.7 955,709 + PfGW456L13_850 0.20 +1.0 955,709 + PfGW456L13_850 0.20 -1.1 955,709 + PfGW456L13_850 0.20 -0.5 955,709 + PfGW456L13_850 0.20 +0.2 955,709 + PfGW456L13_850 0.20 +0.5 955,709 + PfGW456L13_850 0.20 +0.9 955,709 + PfGW456L13_850 0.20 -0.7 955,709 + PfGW456L13_850 0.20 -0.1 955,709 + PfGW456L13_850 0.20 +1.1 955,709 + PfGW456L13_850 0.20 -0.2 955,709 + PfGW456L13_850 0.20 -0.7 955,710 - PfGW456L13_850 0.20 +0.2 955,710 - PfGW456L13_850 0.20 -0.7 955,710 - PfGW456L13_850 0.20 +0.7 955,802 + PfGW456L13_850 0.23 -0.1 955,802 + PfGW456L13_850 0.23 -0.1 955,802 + PfGW456L13_850 0.23 +0.2 955,802 + PfGW456L13_850 0.23 -1.0 955,898 + PfGW456L13_850 0.26 +0.9 955,898 + PfGW456L13_850 0.26 +0.5 955,899 - PfGW456L13_850 0.26 -1.0 955,899 - PfGW456L13_850 0.26 +0.7 955,899 - PfGW456L13_850 0.26 +0.3 955,899 - PfGW456L13_850 0.26 +0.0 956,069 + PfGW456L13_850 0.32 -0.0 956,070 - PfGW456L13_850 0.32 +0.5 956,189 + PfGW456L13_850 0.37 +0.1 956,190 - PfGW456L13_850 0.37 -0.3 956,190 - PfGW456L13_850 0.37 +0.5 956,540 + PfGW456L13_850 0.49 -0.7 956,540 + PfGW456L13_850 0.49 +0.5 956,541 - PfGW456L13_850 0.49 +0.2 956,541 - PfGW456L13_850 0.49 +0.8 956,649 + PfGW456L13_850 0.53 +0.4 956,675 + PfGW456L13_850 0.54 -0.2 956,768 + PfGW456L13_850 0.57 +0.3 956,768 + PfGW456L13_850 0.57 +0.1 956,768 + PfGW456L13_850 0.57 +0.4 956,769 - PfGW456L13_850 0.57 -0.2 956,769 - PfGW456L13_850 0.57 -1.1 956,769 - PfGW456L13_850 0.57 -0.3 956,769 - PfGW456L13_850 0.57 -0.5 956,769 - PfGW456L13_850 0.57 +0.4 956,769 - PfGW456L13_850 0.57 -0.7 956,769 - PfGW456L13_850 0.57 -0.3 956,769 - PfGW456L13_850 0.57 -0.3 956,955 - PfGW456L13_850 0.64 +0.5 956,955 - PfGW456L13_850 0.64 +0.0 956,955 - PfGW456L13_850 0.64 -1.2 957,009 - PfGW456L13_850 0.65 -0.6 957,009 - PfGW456L13_850 0.65 -0.1 957,009 - PfGW456L13_850 0.65 -0.3 957,009 - PfGW456L13_850 0.65 +0.2 957,027 - PfGW456L13_850 0.66 +0.1 957,038 + PfGW456L13_850 0.66 -0.6 957,038 + PfGW456L13_850 0.66 +0.7 957,038 + PfGW456L13_850 0.66 +0.8 957,038 + PfGW456L13_850 0.66 +0.5 957,038 + PfGW456L13_850 0.66 -0.3 957,038 + PfGW456L13_850 0.66 -0.6 957,038 + PfGW456L13_850 0.66 +0.5 957,038 + PfGW456L13_850 0.66 +1.3 957,039 - PfGW456L13_850 0.67 -0.2 957,039 - PfGW456L13_850 0.67 +0.9 957,039 - PfGW456L13_850 0.67 +0.5 957,039 - PfGW456L13_850 0.67 +0.0 957,039 - PfGW456L13_850 0.67 +0.1 957,039 - PfGW456L13_850 0.67 -0.6 957,039 - PfGW456L13_850 0.67 +0.0 957,039 - PfGW456L13_850 0.67 +0.1 957,039 - PfGW456L13_850 0.67 -0.9 957,131 + PfGW456L13_850 0.70 -1.3 957,131 + PfGW456L13_850 0.70 +0.8 957,132 - PfGW456L13_850 0.70 -0.3 957,168 - PfGW456L13_850 0.71 -1.0 957,233 + PfGW456L13_850 0.73 +0.7 957,233 + PfGW456L13_850 0.73 -0.0 957,233 + PfGW456L13_850 0.73 +0.6 957,234 - PfGW456L13_850 0.73 -1.1 957,234 - PfGW456L13_850 0.73 -0.0 957,234 - PfGW456L13_850 0.73 +0.5 957,234 - PfGW456L13_850 0.73 +0.3 957,234 - PfGW456L13_850 0.73 -1.0 957,234 - PfGW456L13_850 0.73 -1.6 957,312 - PfGW456L13_850 0.76 -0.3 957,326 + PfGW456L13_850 0.77 +1.1 957,327 - PfGW456L13_850 0.77 +0.2 957,404 + PfGW456L13_850 0.79 -0.6 957,404 + PfGW456L13_850 0.79 +0.1 957,404 + PfGW456L13_850 0.79 +0.4 957,404 + PfGW456L13_850 0.79 -1.1 957,405 - PfGW456L13_850 0.79 -0.2 957,405 - PfGW456L13_850 0.79 -0.2 957,405 - PfGW456L13_850 0.79 -0.1 957,405 - PfGW456L13_850 0.79 -1.0 957,405 - PfGW456L13_850 0.79 -1.1 957,698 + PfGW456L13_850 0.90 +0.2 957,698 + PfGW456L13_850 0.90 +0.9 957,698 + PfGW456L13_850 0.90 -0.3 957,699 - PfGW456L13_850 0.90 +0.2 957,699 - PfGW456L13_850 0.90 +0.1 957,791 + +0.5 957,791 + -0.7 957,792 - +1.5 958,050 - +0.6 958,073 - -0.1 958,194 + -1.7 958,194 + -1.0 958,195 - +0.2 958,195 - -0.0 958,195 - +0.3 958,195 - -0.4 958,195 - +0.3 958,195 - -1.0 958,422 - -0.8 958,430 + +0.3 958,430 + +0.2 958,430 + -0.2 958,430 + -2.6 958,430 + +0.4 958,430 + +0.4 958,430 + -0.3 958,430 + -0.8 958,430 + -0.9 958,430 + +1.1 958,430 + +0.8 958,430 + -0.5 958,430 + +0.4 958,431 - -0.7 958,431 - +0.8 958,431 - +0.8 958,431 - +1.0 958,431 - +0.2 958,431 - +0.3 958,431 - +0.4 958,431 - +0.0 958,449 - +1.2 958,529 + +0.9 958,530 - -0.7 958,530 - +0.4 958,570 + +0.7 958,571 - +0.7 958,623 + +1.4 958,624 - -0.2 958,641 + -0.1 958,642 - -2.2 958,690 - PfGW456L13_852 0.18 +1.1 958,785 + PfGW456L13_852 0.51 -0.7
Or see this region's nucleotide sequence