Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_20600 and OH686_20605 are separated by 78 nucleotides OH686_20605 and OH686_20610 are separated by 4 nucleotides OH686_20610 and OH686_20615 are separated by 74 nucleotides OH686_20615 and OH686_20620 overlap by 4 nucleotides
OH686_20600: OH686_20600 - Aerotaxis sensor receptor protein, at 4,204,411 to 4,205,976
_20600
OH686_20605: OH686_20605 - Uncharacterized conserved protein YfiP, contains DTW domain, at 4,206,055 to 4,206,645
_20605
OH686_20610: OH686_20610 - hypothetical protein, at 4,206,650 to 4,207,006
_20610
OH686_20615: OH686_20615 - redox-sensitive transcriptional activator SoxR, at 4,207,081 to 4,207,536
_20615
OH686_20620: OH686_20620 - Type I secretion membrane fusion protein, HlyD family, at 4,207,533 to 4,208,891
_20620
Position (kb)
4206
4207
4208 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4205.679 kb on + strand, within OH686_20600 at 4205.941 kb on + strand at 4205.941 kb on + strand at 4205.942 kb on - strand at 4205.942 kb on - strand at 4205.975 kb on - strand at 4205.975 kb on - strand at 4206.618 kb on + strand at 4206.618 kb on + strand at 4206.619 kb on - strand at 4206.622 kb on + strand at 4206.622 kb on + strand at 4206.622 kb on + strand at 4206.622 kb on + strand at 4206.622 kb on + strand at 4206.622 kb on + strand at 4206.622 kb on + strand at 4206.622 kb on + strand at 4206.622 kb on + strand at 4206.622 kb on + strand at 4206.622 kb on + strand at 4206.623 kb on - strand at 4206.623 kb on - strand at 4206.623 kb on - strand at 4206.623 kb on - strand at 4206.623 kb on - strand at 4206.623 kb on - strand at 4206.623 kb on - strand at 4206.882 kb on + strand, within OH686_20610 at 4206.882 kb on + strand, within OH686_20610 at 4206.882 kb on + strand, within OH686_20610 at 4206.882 kb on + strand, within OH686_20610 at 4206.883 kb on - strand, within OH686_20610 at 4206.883 kb on - strand, within OH686_20610 at 4206.883 kb on - strand, within OH686_20610 at 4206.985 kb on + strand at 4206.985 kb on + strand at 4206.998 kb on + strand at 4206.998 kb on + strand at 4206.998 kb on + strand at 4206.999 kb on - strand at 4206.999 kb on - strand at 4207.168 kb on + strand, within OH686_20615 at 4207.168 kb on + strand, within OH686_20615 at 4207.168 kb on + strand, within OH686_20615 at 4207.169 kb on - strand, within OH686_20615 at 4207.585 kb on + strand at 4207.585 kb on + strand at 4207.585 kb on + strand at 4207.585 kb on + strand at 4207.586 kb on - strand at 4207.586 kb on - strand at 4207.586 kb on - strand at 4207.705 kb on + strand, within OH686_20620 at 4207.705 kb on + strand, within OH686_20620 at 4207.705 kb on + strand, within OH686_20620 at 4207.705 kb on + strand, within OH686_20620 at 4207.705 kb on + strand, within OH686_20620 at 4207.705 kb on + strand, within OH686_20620 at 4207.705 kb on + strand, within OH686_20620 at 4207.706 kb on - strand, within OH686_20620 at 4207.706 kb on - strand, within OH686_20620 at 4207.706 kb on - strand, within OH686_20620 at 4207.706 kb on - strand, within OH686_20620 at 4207.706 kb on - strand, within OH686_20620 at 4207.777 kb on + strand, within OH686_20620 at 4207.777 kb on + strand, within OH686_20620 at 4207.777 kb on + strand, within OH686_20620 at 4207.777 kb on + strand, within OH686_20620 at 4207.778 kb on - strand, within OH686_20620 at 4207.778 kb on - strand, within OH686_20620 at 4207.786 kb on + strand, within OH686_20620 at 4207.786 kb on + strand, within OH686_20620 at 4207.786 kb on + strand, within OH686_20620 at 4207.786 kb on + strand, within OH686_20620 at 4207.786 kb on + strand, within OH686_20620 at 4207.786 kb on + strand, within OH686_20620 at 4207.786 kb on + strand, within OH686_20620 at 4207.786 kb on + strand, within OH686_20620 at 4207.786 kb on + strand, within OH686_20620 at 4207.786 kb on + strand, within OH686_20620 at 4207.787 kb on - strand, within OH686_20620 at 4207.787 kb on - strand, within OH686_20620 at 4207.787 kb on - strand, within OH686_20620 at 4207.787 kb on - strand, within OH686_20620 at 4207.787 kb on - strand, within OH686_20620 at 4207.787 kb on - strand, within OH686_20620 at 4207.787 kb on - strand, within OH686_20620 at 4207.787 kb on - strand, within OH686_20620 at 4207.787 kb on - strand, within OH686_20620 at 4207.787 kb on - strand, within OH686_20620 at 4207.787 kb on - strand, within OH686_20620 at 4207.792 kb on + strand, within OH686_20620 at 4207.793 kb on - strand, within OH686_20620 at 4207.793 kb on - strand, within OH686_20620 at 4207.966 kb on + strand, within OH686_20620 at 4207.966 kb on + strand, within OH686_20620 at 4207.966 kb on + strand, within OH686_20620 at 4207.967 kb on - strand, within OH686_20620 at 4207.967 kb on - strand, within OH686_20620 at 4207.967 kb on - strand, within OH686_20620 at 4207.967 kb on - strand, within OH686_20620 at 4207.967 kb on - strand, within OH686_20620 at 4207.967 kb on - strand, within OH686_20620
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 4,205,679 + OH686_20600 0.81 -1.7 4,205,941 + +0.7 4,205,941 + +0.8 4,205,942 - -0.9 4,205,942 - +0.3 4,205,975 - +0.6 4,205,975 - -0.2 4,206,618 + -0.3 4,206,618 + -0.9 4,206,619 - -2.7 4,206,622 + -0.3 4,206,622 + -1.5 4,206,622 + +0.3 4,206,622 + +0.6 4,206,622 + -0.7 4,206,622 + -0.2 4,206,622 + -0.6 4,206,622 + -0.7 4,206,622 + -2.9 4,206,622 + -0.6 4,206,622 + +0.4 4,206,623 - +0.2 4,206,623 - -0.5 4,206,623 - +0.2 4,206,623 - -0.9 4,206,623 - -1.7 4,206,623 - +0.2 4,206,623 - -0.3 4,206,882 + OH686_20610 0.65 +0.9 4,206,882 + OH686_20610 0.65 -0.2 4,206,882 + OH686_20610 0.65 -0.1 4,206,882 + OH686_20610 0.65 +0.2 4,206,883 - OH686_20610 0.65 +0.8 4,206,883 - OH686_20610 0.65 +1.2 4,206,883 - OH686_20610 0.65 +0.8 4,206,985 + -0.5 4,206,985 + +0.3 4,206,998 + +0.0 4,206,998 + -0.6 4,206,998 + +0.3 4,206,999 - -0.0 4,206,999 - -0.2 4,207,168 + OH686_20615 0.19 +0.1 4,207,168 + OH686_20615 0.19 +0.6 4,207,168 + OH686_20615 0.19 -1.7 4,207,169 - OH686_20615 0.19 +0.3 4,207,585 + +0.0 4,207,585 + -1.5 4,207,585 + -1.2 4,207,585 + +2.0 4,207,586 - +1.4 4,207,586 - +0.8 4,207,586 - +0.0 4,207,705 + OH686_20620 0.13 -0.1 4,207,705 + OH686_20620 0.13 +0.2 4,207,705 + OH686_20620 0.13 +0.6 4,207,705 + OH686_20620 0.13 +0.2 4,207,705 + OH686_20620 0.13 +0.8 4,207,705 + OH686_20620 0.13 +1.4 4,207,705 + OH686_20620 0.13 -2.3 4,207,706 - OH686_20620 0.13 +0.1 4,207,706 - OH686_20620 0.13 +0.5 4,207,706 - OH686_20620 0.13 -1.3 4,207,706 - OH686_20620 0.13 +0.7 4,207,706 - OH686_20620 0.13 -1.1 4,207,777 + OH686_20620 0.18 +0.5 4,207,777 + OH686_20620 0.18 +0.0 4,207,777 + OH686_20620 0.18 +0.4 4,207,777 + OH686_20620 0.18 +0.6 4,207,778 - OH686_20620 0.18 -0.3 4,207,778 - OH686_20620 0.18 +0.7 4,207,786 + OH686_20620 0.19 -1.1 4,207,786 + OH686_20620 0.19 -0.5 4,207,786 + OH686_20620 0.19 -1.6 4,207,786 + OH686_20620 0.19 -2.6 4,207,786 + OH686_20620 0.19 -0.4 4,207,786 + OH686_20620 0.19 -1.6 4,207,786 + OH686_20620 0.19 -0.0 4,207,786 + OH686_20620 0.19 +0.4 4,207,786 + OH686_20620 0.19 +0.1 4,207,786 + OH686_20620 0.19 +0.4 4,207,787 - OH686_20620 0.19 +0.2 4,207,787 - OH686_20620 0.19 -1.5 4,207,787 - OH686_20620 0.19 -0.0 4,207,787 - OH686_20620 0.19 +0.8 4,207,787 - OH686_20620 0.19 -0.3 4,207,787 - OH686_20620 0.19 -1.6 4,207,787 - OH686_20620 0.19 +0.2 4,207,787 - OH686_20620 0.19 -0.6 4,207,787 - OH686_20620 0.19 -0.4 4,207,787 - OH686_20620 0.19 +0.0 4,207,787 - OH686_20620 0.19 +1.2 4,207,792 + OH686_20620 0.19 +0.1 4,207,793 - OH686_20620 0.19 +0.8 4,207,793 - OH686_20620 0.19 -0.3 4,207,966 + OH686_20620 0.32 -0.5 4,207,966 + OH686_20620 0.32 -0.7 4,207,966 + OH686_20620 0.32 -0.8 4,207,967 - OH686_20620 0.32 -2.4 4,207,967 - OH686_20620 0.32 +0.3 4,207,967 - OH686_20620 0.32 -0.3 4,207,967 - OH686_20620 0.32 -0.0 4,207,967 - OH686_20620 0.32 +0.1 4,207,967 - OH686_20620 0.32 +0.1
Or see this region's nucleotide sequence