Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_16020 and OH686_16025 overlap by 4 nucleotides OH686_16025 and OH686_16030 are separated by 68 nucleotides OH686_16030 and OH686_16035 are separated by 127 nucleotides OH686_16035 and OH686_16040 overlap by 15 nucleotides
OH686_16020: OH686_16020 - hypothetical protein, at 3,349,962 to 3,350,975
_16020
OH686_16025: OH686_16025 - YpfJ protein, zinc metalloprotease superfamily, at 3,350,972 to 3,351,838
_16025
OH686_16030: OH686_16030 - CopG protein, at 3,351,907 to 3,352,338
_16030
OH686_16035: OH686_16035 - hypothetical protein, at 3,352,466 to 3,352,855
_16035
OH686_16040: OH686_16040 - Transcriptional regulator, AcrR family, at 3,352,841 to 3,353,476
_16040
Position (kb)
3351
3352
3353 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3350.910 kb on + strand at 3350.910 kb on + strand at 3350.910 kb on + strand at 3350.910 kb on + strand at 3350.910 kb on + strand at 3350.910 kb on + strand at 3350.910 kb on + strand at 3350.910 kb on + strand at 3350.910 kb on + strand at 3350.910 kb on + strand at 3350.910 kb on + strand at 3350.910 kb on + strand at 3350.910 kb on + strand at 3350.910 kb on + strand at 3350.911 kb on - strand at 3350.911 kb on - strand at 3350.911 kb on - strand at 3350.911 kb on - strand at 3350.911 kb on - strand at 3350.911 kb on - strand at 3350.911 kb on - strand at 3350.911 kb on - strand at 3350.911 kb on - strand at 3350.911 kb on - strand at 3350.911 kb on - strand at 3350.911 kb on - strand at 3350.952 kb on + strand at 3350.952 kb on + strand at 3350.952 kb on + strand at 3350.952 kb on + strand at 3350.953 kb on - strand at 3350.974 kb on - strand at 3350.974 kb on - strand at 3350.974 kb on - strand at 3350.974 kb on - strand at 3350.996 kb on - strand at 3351.357 kb on + strand, within OH686_16025 at 3351.357 kb on + strand, within OH686_16025 at 3351.357 kb on + strand, within OH686_16025 at 3351.357 kb on + strand, within OH686_16025 at 3351.357 kb on + strand, within OH686_16025 at 3351.357 kb on + strand, within OH686_16025 at 3351.357 kb on + strand, within OH686_16025 at 3351.358 kb on - strand, within OH686_16025 at 3351.358 kb on - strand, within OH686_16025 at 3351.358 kb on - strand, within OH686_16025 at 3351.358 kb on - strand, within OH686_16025 at 3351.358 kb on - strand, within OH686_16025 at 3351.358 kb on - strand, within OH686_16025 at 3351.358 kb on - strand, within OH686_16025 at 3351.358 kb on - strand, within OH686_16025 at 3351.358 kb on - strand, within OH686_16025 at 3351.426 kb on + strand, within OH686_16025 at 3351.426 kb on + strand, within OH686_16025 at 3351.426 kb on + strand, within OH686_16025 at 3351.426 kb on + strand, within OH686_16025 at 3351.426 kb on + strand, within OH686_16025 at 3351.427 kb on - strand, within OH686_16025 at 3351.427 kb on - strand, within OH686_16025 at 3351.427 kb on - strand, within OH686_16025 at 3351.427 kb on - strand, within OH686_16025 at 3351.450 kb on + strand, within OH686_16025 at 3351.450 kb on + strand, within OH686_16025 at 3351.450 kb on + strand, within OH686_16025 at 3351.450 kb on + strand, within OH686_16025 at 3351.450 kb on + strand, within OH686_16025 at 3351.450 kb on + strand, within OH686_16025 at 3351.450 kb on + strand, within OH686_16025 at 3351.450 kb on + strand, within OH686_16025 at 3351.451 kb on - strand, within OH686_16025 at 3351.451 kb on - strand, within OH686_16025 at 3351.451 kb on - strand, within OH686_16025 at 3351.451 kb on - strand, within OH686_16025 at 3351.451 kb on - strand, within OH686_16025 at 3351.451 kb on - strand, within OH686_16025 at 3351.515 kb on + strand, within OH686_16025 at 3351.515 kb on + strand, within OH686_16025 at 3351.515 kb on + strand, within OH686_16025 at 3351.515 kb on + strand, within OH686_16025 at 3351.515 kb on + strand, within OH686_16025 at 3351.515 kb on + strand, within OH686_16025 at 3351.515 kb on + strand, within OH686_16025 at 3351.516 kb on - strand, within OH686_16025 at 3351.516 kb on - strand, within OH686_16025 at 3351.516 kb on - strand, within OH686_16025 at 3351.516 kb on - strand, within OH686_16025 at 3351.516 kb on - strand, within OH686_16025 at 3351.516 kb on - strand, within OH686_16025 at 3351.516 kb on - strand, within OH686_16025 at 3351.516 kb on - strand, within OH686_16025 at 3351.516 kb on - strand, within OH686_16025 at 3351.531 kb on + strand, within OH686_16025 at 3351.532 kb on - strand, within OH686_16025 at 3351.532 kb on - strand, within OH686_16025 at 3351.532 kb on - strand, within OH686_16025 at 3351.820 kb on + strand at 3351.821 kb on - strand at 3351.821 kb on - strand at 3351.869 kb on + strand at 3351.869 kb on + strand at 3351.869 kb on + strand at 3351.870 kb on - strand at 3351.870 kb on - strand at 3351.870 kb on - strand at 3351.971 kb on + strand, within OH686_16030 at 3351.971 kb on + strand, within OH686_16030 at 3351.971 kb on + strand, within OH686_16030 at 3351.972 kb on - strand, within OH686_16030 at 3352.376 kb on - strand at 3352.433 kb on + strand at 3352.433 kb on + strand at 3352.433 kb on + strand at 3352.434 kb on - strand at 3352.434 kb on - strand at 3352.434 kb on - strand at 3352.434 kb on - strand at 3352.434 kb on - strand at 3352.434 kb on - strand at 3352.507 kb on - strand, within OH686_16035 at 3352.529 kb on + strand, within OH686_16035 at 3352.529 kb on + strand, within OH686_16035 at 3352.530 kb on - strand, within OH686_16035 at 3352.530 kb on - strand, within OH686_16035 at 3352.530 kb on - strand, within OH686_16035 at 3352.530 kb on - strand, within OH686_16035 at 3352.530 kb on - strand, within OH686_16035 at 3352.610 kb on + strand, within OH686_16035 at 3352.610 kb on + strand, within OH686_16035 at 3352.610 kb on + strand, within OH686_16035 at 3352.610 kb on + strand, within OH686_16035 at 3352.610 kb on + strand, within OH686_16035 at 3352.611 kb on - strand, within OH686_16035 at 3352.611 kb on - strand, within OH686_16035 at 3352.611 kb on - strand, within OH686_16035 at 3352.611 kb on - strand, within OH686_16035 at 3352.611 kb on - strand, within OH686_16035 at 3352.613 kb on + strand, within OH686_16035 at 3352.613 kb on + strand, within OH686_16035 at 3352.613 kb on + strand, within OH686_16035 at 3352.613 kb on + strand, within OH686_16035 at 3352.613 kb on + strand, within OH686_16035 at 3352.614 kb on - strand, within OH686_16035 at 3352.614 kb on - strand, within OH686_16035 at 3352.614 kb on - strand, within OH686_16035 at 3352.614 kb on - strand, within OH686_16035 at 3352.709 kb on + strand, within OH686_16035 at 3352.709 kb on + strand, within OH686_16035 at 3352.709 kb on + strand, within OH686_16035 at 3352.710 kb on - strand, within OH686_16035 at 3352.710 kb on - strand, within OH686_16035 at 3352.782 kb on - strand, within OH686_16035 at 3352.853 kb on + strand at 3352.854 kb on - strand at 3352.883 kb on + strand at 3352.884 kb on - strand at 3352.884 kb on - strand at 3352.884 kb on - strand at 3352.966 kb on + strand, within OH686_16040 at 3352.966 kb on + strand, within OH686_16040 at 3352.966 kb on + strand, within OH686_16040 at 3352.966 kb on + strand, within OH686_16040 at 3352.966 kb on + strand, within OH686_16040 at 3352.966 kb on + strand, within OH686_16040 at 3352.966 kb on + strand, within OH686_16040 at 3352.967 kb on - strand, within OH686_16040 at 3352.967 kb on - strand, within OH686_16040 at 3352.968 kb on + strand, within OH686_16040 at 3352.968 kb on + strand, within OH686_16040 at 3352.968 kb on + strand, within OH686_16040 at 3352.968 kb on + strand, within OH686_16040 at 3352.968 kb on + strand, within OH686_16040 at 3352.968 kb on + strand, within OH686_16040 at 3352.968 kb on + strand, within OH686_16040 at 3352.968 kb on + strand, within OH686_16040 at 3352.968 kb on + strand, within OH686_16040 at 3352.968 kb on + strand, within OH686_16040 at 3352.969 kb on - strand, within OH686_16040 at 3352.969 kb on - strand, within OH686_16040 at 3352.969 kb on - strand, within OH686_16040 at 3352.969 kb on - strand, within OH686_16040 at 3352.969 kb on - strand, within OH686_16040 at 3352.969 kb on - strand, within OH686_16040 at 3352.969 kb on - strand, within OH686_16040 at 3353.121 kb on + strand, within OH686_16040 at 3353.121 kb on + strand, within OH686_16040 at 3353.122 kb on - strand, within OH686_16040 at 3353.122 kb on - strand, within OH686_16040 at 3353.122 kb on - strand, within OH686_16040 at 3353.122 kb on - strand, within OH686_16040 at 3353.331 kb on + strand, within OH686_16040 at 3353.331 kb on + strand, within OH686_16040 at 3353.331 kb on + strand, within OH686_16040 at 3353.331 kb on + strand, within OH686_16040 at 3353.331 kb on + strand, within OH686_16040 at 3353.331 kb on + strand, within OH686_16040 at 3353.331 kb on + strand, within OH686_16040 at 3353.331 kb on + strand, within OH686_16040 at 3353.331 kb on + strand, within OH686_16040 at 3353.331 kb on + strand, within OH686_16040 at 3353.331 kb on + strand, within OH686_16040 at 3353.331 kb on + strand, within OH686_16040 at 3353.332 kb on - strand, within OH686_16040 at 3353.332 kb on - strand, within OH686_16040 at 3353.332 kb on - strand, within OH686_16040 at 3353.332 kb on - strand, within OH686_16040 at 3353.332 kb on - strand, within OH686_16040 at 3353.332 kb on - strand, within OH686_16040 at 3353.332 kb on - strand, within OH686_16040 at 3353.332 kb on - strand, within OH686_16040 at 3353.332 kb on - strand, within OH686_16040 at 3353.332 kb on - strand, within OH686_16040 at 3353.332 kb on - strand, within OH686_16040
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 3,350,910 + -0.5 3,350,910 + +0.1 3,350,910 + +1.0 3,350,910 + -0.7 3,350,910 + -0.4 3,350,910 + -0.4 3,350,910 + -0.6 3,350,910 + +0.1 3,350,910 + -0.9 3,350,910 + +0.6 3,350,910 + -0.5 3,350,910 + -0.9 3,350,910 + -0.4 3,350,910 + -1.3 3,350,911 - -1.9 3,350,911 - -0.2 3,350,911 - -0.9 3,350,911 - +0.3 3,350,911 - -0.5 3,350,911 - -0.9 3,350,911 - +2.9 3,350,911 - +0.3 3,350,911 - -0.4 3,350,911 - +0.7 3,350,911 - +0.4 3,350,911 - -0.4 3,350,952 + -0.7 3,350,952 + +0.6 3,350,952 + -0.8 3,350,952 + +0.4 3,350,953 - +0.1 3,350,974 - -0.2 3,350,974 - -0.1 3,350,974 - -0.0 3,350,974 - +0.5 3,350,996 - +0.7 3,351,357 + OH686_16025 0.44 +0.8 3,351,357 + OH686_16025 0.44 -0.1 3,351,357 + OH686_16025 0.44 -0.1 3,351,357 + OH686_16025 0.44 -0.0 3,351,357 + OH686_16025 0.44 -1.9 3,351,357 + OH686_16025 0.44 -0.1 3,351,357 + OH686_16025 0.44 +0.1 3,351,358 - OH686_16025 0.45 -1.1 3,351,358 - OH686_16025 0.45 +0.5 3,351,358 - OH686_16025 0.45 -0.0 3,351,358 - OH686_16025 0.45 -0.1 3,351,358 - OH686_16025 0.45 +0.1 3,351,358 - OH686_16025 0.45 +0.6 3,351,358 - OH686_16025 0.45 +0.8 3,351,358 - OH686_16025 0.45 +0.6 3,351,358 - OH686_16025 0.45 +0.2 3,351,426 + OH686_16025 0.52 -0.1 3,351,426 + OH686_16025 0.52 -0.2 3,351,426 + OH686_16025 0.52 -1.0 3,351,426 + OH686_16025 0.52 -0.4 3,351,426 + OH686_16025 0.52 +0.1 3,351,427 - OH686_16025 0.52 -0.7 3,351,427 - OH686_16025 0.52 +0.4 3,351,427 - OH686_16025 0.52 +0.0 3,351,427 - OH686_16025 0.52 +0.9 3,351,450 + OH686_16025 0.55 -0.2 3,351,450 + OH686_16025 0.55 -0.6 3,351,450 + OH686_16025 0.55 -0.3 3,351,450 + OH686_16025 0.55 +0.0 3,351,450 + OH686_16025 0.55 +1.8 3,351,450 + OH686_16025 0.55 +0.4 3,351,450 + OH686_16025 0.55 +0.3 3,351,450 + OH686_16025 0.55 +0.4 3,351,451 - OH686_16025 0.55 -2.6 3,351,451 - OH686_16025 0.55 -0.1 3,351,451 - OH686_16025 0.55 +0.8 3,351,451 - OH686_16025 0.55 -0.8 3,351,451 - OH686_16025 0.55 +0.3 3,351,451 - OH686_16025 0.55 -0.5 3,351,515 + OH686_16025 0.63 +0.3 3,351,515 + OH686_16025 0.63 +0.3 3,351,515 + OH686_16025 0.63 +0.6 3,351,515 + OH686_16025 0.63 -0.2 3,351,515 + OH686_16025 0.63 +0.8 3,351,515 + OH686_16025 0.63 +0.3 3,351,515 + OH686_16025 0.63 +0.7 3,351,516 - OH686_16025 0.63 -0.6 3,351,516 - OH686_16025 0.63 -0.4 3,351,516 - OH686_16025 0.63 +0.9 3,351,516 - OH686_16025 0.63 -0.9 3,351,516 - OH686_16025 0.63 -0.4 3,351,516 - OH686_16025 0.63 +2.0 3,351,516 - OH686_16025 0.63 +0.7 3,351,516 - OH686_16025 0.63 +0.3 3,351,516 - OH686_16025 0.63 +0.0 3,351,531 + OH686_16025 0.64 -0.3 3,351,532 - OH686_16025 0.65 +0.2 3,351,532 - OH686_16025 0.65 +0.0 3,351,532 - OH686_16025 0.65 +0.6 3,351,820 + -0.6 3,351,821 - +1.3 3,351,821 - -0.2 3,351,869 + -0.2 3,351,869 + -0.0 3,351,869 + +0.1 3,351,870 - +0.1 3,351,870 - +0.3 3,351,870 - -1.3 3,351,971 + OH686_16030 0.15 +1.3 3,351,971 + OH686_16030 0.15 +0.8 3,351,971 + OH686_16030 0.15 -0.6 3,351,972 - OH686_16030 0.15 -0.5 3,352,376 - +0.9 3,352,433 + -0.9 3,352,433 + +0.3 3,352,433 + +1.7 3,352,434 - -0.1 3,352,434 - +0.7 3,352,434 - +0.6 3,352,434 - -0.5 3,352,434 - -0.8 3,352,434 - +0.3 3,352,507 - OH686_16035 0.11 +0.1 3,352,529 + OH686_16035 0.16 -0.1 3,352,529 + OH686_16035 0.16 +0.5 3,352,530 - OH686_16035 0.16 +0.1 3,352,530 - OH686_16035 0.16 +0.5 3,352,530 - OH686_16035 0.16 -1.4 3,352,530 - OH686_16035 0.16 -0.8 3,352,530 - OH686_16035 0.16 -0.4 3,352,610 + OH686_16035 0.37 -1.2 3,352,610 + OH686_16035 0.37 -0.4 3,352,610 + OH686_16035 0.37 +0.7 3,352,610 + OH686_16035 0.37 +0.3 3,352,610 + OH686_16035 0.37 +0.7 3,352,611 - OH686_16035 0.37 -0.9 3,352,611 - OH686_16035 0.37 +0.2 3,352,611 - OH686_16035 0.37 -0.6 3,352,611 - OH686_16035 0.37 +0.0 3,352,611 - OH686_16035 0.37 -0.9 3,352,613 + OH686_16035 0.38 +0.1 3,352,613 + OH686_16035 0.38 -0.3 3,352,613 + OH686_16035 0.38 -1.7 3,352,613 + OH686_16035 0.38 +1.3 3,352,613 + OH686_16035 0.38 -0.9 3,352,614 - OH686_16035 0.38 -0.1 3,352,614 - OH686_16035 0.38 +0.1 3,352,614 - OH686_16035 0.38 -0.3 3,352,614 - OH686_16035 0.38 +0.6 3,352,709 + OH686_16035 0.62 -0.3 3,352,709 + OH686_16035 0.62 +0.5 3,352,709 + OH686_16035 0.62 -1.4 3,352,710 - OH686_16035 0.63 -0.4 3,352,710 - OH686_16035 0.63 -1.2 3,352,782 - OH686_16035 0.81 -0.7 3,352,853 + +1.2 3,352,854 - -0.3 3,352,883 + -0.9 3,352,884 - +0.9 3,352,884 - +0.1 3,352,884 - -0.2 3,352,966 + OH686_16040 0.20 +0.1 3,352,966 + OH686_16040 0.20 -1.7 3,352,966 + OH686_16040 0.20 -2.5 3,352,966 + OH686_16040 0.20 +0.2 3,352,966 + OH686_16040 0.20 +1.3 3,352,966 + OH686_16040 0.20 -0.8 3,352,966 + OH686_16040 0.20 -0.3 3,352,967 - OH686_16040 0.20 +0.2 3,352,967 - OH686_16040 0.20 -0.3 3,352,968 + OH686_16040 0.20 -0.1 3,352,968 + OH686_16040 0.20 -1.8 3,352,968 + OH686_16040 0.20 +0.4 3,352,968 + OH686_16040 0.20 -1.5 3,352,968 + OH686_16040 0.20 -1.4 3,352,968 + OH686_16040 0.20 +0.6 3,352,968 + OH686_16040 0.20 +0.9 3,352,968 + OH686_16040 0.20 -0.6 3,352,968 + OH686_16040 0.20 +0.6 3,352,968 + OH686_16040 0.20 +0.4 3,352,969 - OH686_16040 0.20 +0.4 3,352,969 - OH686_16040 0.20 +0.4 3,352,969 - OH686_16040 0.20 -0.5 3,352,969 - OH686_16040 0.20 -0.3 3,352,969 - OH686_16040 0.20 -0.1 3,352,969 - OH686_16040 0.20 +0.3 3,352,969 - OH686_16040 0.20 +0.1 3,353,121 + OH686_16040 0.44 -0.9 3,353,121 + OH686_16040 0.44 -1.4 3,353,122 - OH686_16040 0.44 +1.0 3,353,122 - OH686_16040 0.44 +0.4 3,353,122 - OH686_16040 0.44 +0.1 3,353,122 - OH686_16040 0.44 +0.3 3,353,331 + OH686_16040 0.77 -0.3 3,353,331 + OH686_16040 0.77 -1.6 3,353,331 + OH686_16040 0.77 -2.0 3,353,331 + OH686_16040 0.77 -1.6 3,353,331 + OH686_16040 0.77 -0.3 3,353,331 + OH686_16040 0.77 +1.0 3,353,331 + OH686_16040 0.77 -0.2 3,353,331 + OH686_16040 0.77 -0.1 3,353,331 + OH686_16040 0.77 -0.5 3,353,331 + OH686_16040 0.77 -0.8 3,353,331 + OH686_16040 0.77 +0.0 3,353,331 + OH686_16040 0.77 -1.8 3,353,332 - OH686_16040 0.77 -0.1 3,353,332 - OH686_16040 0.77 +0.2 3,353,332 - OH686_16040 0.77 +0.2 3,353,332 - OH686_16040 0.77 +0.3 3,353,332 - OH686_16040 0.77 -0.1 3,353,332 - OH686_16040 0.77 +0.7 3,353,332 - OH686_16040 0.77 -0.2 3,353,332 - OH686_16040 0.77 -0.0 3,353,332 - OH686_16040 0.77 -1.2 3,353,332 - OH686_16040 0.77 -0.6 3,353,332 - OH686_16040 0.77 -0.3
Or see this region's nucleotide sequence