Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_12660 and OH686_12665 overlap by 1 nucleotides OH686_12665 and OH686_12670 are separated by 12 nucleotides OH686_12670 and OH686_12675 are separated by 170 nucleotides
OH686_12660: OH686_12660 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA, at 2,661,698 to 2,663,590
_12660
OH686_12665: OH686_12665 - 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG, at 2,663,590 to 2,664,237
_12665
OH686_12670: OH686_12670 - Chromosome (plasmid) partitioning protein ParA, at 2,664,250 to 2,665,038
_12670
OH686_12675: OH686_12675 - Chromosome (plasmid) partitioning protein ParB, at 2,665,209 to 2,665,919
_12675
Position (kb)
2664
2665
2666 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2663.652 kb on - strand at 2663.689 kb on + strand, within OH686_12665 at 2663.722 kb on + strand, within OH686_12665 at 2663.722 kb on + strand, within OH686_12665 at 2663.722 kb on + strand, within OH686_12665 at 2663.722 kb on + strand, within OH686_12665 at 2663.722 kb on + strand, within OH686_12665 at 2663.722 kb on + strand, within OH686_12665 at 2663.723 kb on - strand, within OH686_12665 at 2663.723 kb on - strand, within OH686_12665 at 2663.723 kb on - strand, within OH686_12665 at 2663.723 kb on - strand, within OH686_12665 at 2663.723 kb on - strand, within OH686_12665 at 2663.858 kb on + strand, within OH686_12665 at 2663.858 kb on + strand, within OH686_12665 at 2663.859 kb on - strand, within OH686_12665 at 2664.218 kb on + strand at 2664.219 kb on - strand at 2664.235 kb on + strand at 2664.874 kb on + strand, within OH686_12670 at 2665.037 kb on - strand at 2665.191 kb on + strand at 2665.192 kb on - strand at 2665.192 kb on - strand at 2665.814 kb on - strand, within OH686_12675 at 2665.814 kb on - strand, within OH686_12675 at 2665.872 kb on + strand at 2665.873 kb on - strand at 2665.942 kb on + strand at 2665.942 kb on + strand at 2665.942 kb on + strand at 2665.943 kb on - strand at 2665.943 kb on - strand at 2665.943 kb on - strand at 2665.996 kb on + strand at 2665.998 kb on + strand at 2665.998 kb on + strand at 2665.998 kb on + strand at 2666.027 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 2,663,652 - -0.5 2,663,689 + OH686_12665 0.15 -0.5 2,663,722 + OH686_12665 0.20 +1.3 2,663,722 + OH686_12665 0.20 -0.8 2,663,722 + OH686_12665 0.20 +2.5 2,663,722 + OH686_12665 0.20 +0.5 2,663,722 + OH686_12665 0.20 -0.5 2,663,722 + OH686_12665 0.20 -0.5 2,663,723 - OH686_12665 0.21 +0.5 2,663,723 - OH686_12665 0.21 -0.6 2,663,723 - OH686_12665 0.21 +2.0 2,663,723 - OH686_12665 0.21 -1.1 2,663,723 - OH686_12665 0.21 +1.0 2,663,858 + OH686_12665 0.41 -0.7 2,663,858 + OH686_12665 0.41 -2.3 2,663,859 - OH686_12665 0.42 +1.0 2,664,218 + +0.8 2,664,219 - +0.0 2,664,235 + -0.5 2,664,874 + OH686_12670 0.79 +0.0 2,665,037 - -0.3 2,665,191 + -0.5 2,665,192 - -0.8 2,665,192 - -0.8 2,665,814 - OH686_12675 0.85 +0.0 2,665,814 - OH686_12675 0.85 -1.1 2,665,872 + -0.8 2,665,873 - +1.0 2,665,942 + +0.2 2,665,942 + +0.6 2,665,942 + -0.2 2,665,943 - +0.4 2,665,943 - -0.8 2,665,943 - +0.5 2,665,996 + -0.2 2,665,998 + -0.0 2,665,998 + -0.3 2,665,998 + +1.6 2,666,027 + -0.1
Or see this region's nucleotide sequence