Strain Fitness in Pseudomonas sp. S08-1 around OH686_04800

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOH686_04795 and OH686_04800 are separated by 151 nucleotidesOH686_04800 and OH686_04805 are separated by 122 nucleotides OH686_04795: OH686_04795 - Putative esterase, at 986,805 to 987,950 _04795 OH686_04800: OH686_04800 - Putative hydrolase, at 988,102 to 990,330 _04800 OH686_04805: OH686_04805 - hypothetical protein, at 990,453 to 991,559 _04805 Position (kb) 988 989 990 991Strain fitness (log2 ratio) -2 -1 0 1 2at 987.127 kb on + strand, within OH686_04795at 987.127 kb on + strand, within OH686_04795at 987.206 kb on + strand, within OH686_04795at 987.218 kb on + strand, within OH686_04795at 987.218 kb on + strand, within OH686_04795at 987.218 kb on + strand, within OH686_04795at 987.219 kb on - strand, within OH686_04795at 987.219 kb on - strand, within OH686_04795at 987.469 kb on + strand, within OH686_04795at 987.469 kb on + strand, within OH686_04795at 987.469 kb on + strand, within OH686_04795at 987.469 kb on + strand, within OH686_04795at 987.469 kb on + strand, within OH686_04795at 987.470 kb on - strand, within OH686_04795at 987.470 kb on - strand, within OH686_04795at 987.470 kb on - strand, within OH686_04795at 987.470 kb on - strand, within OH686_04795at 987.556 kb on + strand, within OH686_04795at 987.556 kb on + strand, within OH686_04795at 987.557 kb on - strand, within OH686_04795at 987.557 kb on - strand, within OH686_04795at 987.557 kb on - strand, within OH686_04795at 987.557 kb on - strand, within OH686_04795at 987.557 kb on - strand, within OH686_04795at 987.557 kb on - strand, within OH686_04795at 987.557 kb on - strand, within OH686_04795at 987.557 kb on - strand, within OH686_04795at 987.557 kb on - strand, within OH686_04795at 987.821 kb on + strand, within OH686_04795at 987.821 kb on + strand, within OH686_04795at 987.822 kb on - strand, within OH686_04795at 987.956 kb on + strandat 987.956 kb on + strandat 987.956 kb on + strandat 987.997 kb on + strandat 987.997 kb on + strandat 988.286 kb on + strandat 988.286 kb on + strandat 988.287 kb on - strandat 988.349 kb on + strand, within OH686_04800at 988.349 kb on + strand, within OH686_04800at 988.350 kb on - strand, within OH686_04800at 988.376 kb on + strand, within OH686_04800at 988.376 kb on + strand, within OH686_04800at 988.376 kb on + strand, within OH686_04800at 988.376 kb on + strand, within OH686_04800at 988.376 kb on + strand, within OH686_04800at 988.376 kb on + strand, within OH686_04800at 988.376 kb on + strand, within OH686_04800at 988.376 kb on + strand, within OH686_04800at 988.376 kb on + strand, within OH686_04800at 988.376 kb on + strand, within OH686_04800at 988.377 kb on - strand, within OH686_04800at 988.377 kb on - strand, within OH686_04800at 988.377 kb on - strand, within OH686_04800at 988.377 kb on - strand, within OH686_04800at 988.377 kb on - strand, within OH686_04800at 988.377 kb on - strand, within OH686_04800at 988.505 kb on + strand, within OH686_04800at 988.505 kb on + strand, within OH686_04800at 988.505 kb on + strand, within OH686_04800at 988.505 kb on + strand, within OH686_04800at 988.506 kb on - strand, within OH686_04800at 988.506 kb on - strand, within OH686_04800at 988.506 kb on - strand, within OH686_04800at 988.532 kb on + strand, within OH686_04800at 988.640 kb on + strand, within OH686_04800at 988.640 kb on + strand, within OH686_04800at 988.640 kb on + strand, within OH686_04800at 988.640 kb on + strand, within OH686_04800at 988.640 kb on + strand, within OH686_04800at 988.640 kb on + strand, within OH686_04800at 988.640 kb on + strand, within OH686_04800at 988.640 kb on + strand, within OH686_04800at 988.640 kb on + strand, within OH686_04800at 988.640 kb on + strand, within OH686_04800at 988.640 kb on + strand, within OH686_04800at 988.640 kb on + strand, within OH686_04800at 988.641 kb on - strand, within OH686_04800at 988.641 kb on - strand, within OH686_04800at 988.641 kb on - strand, within OH686_04800at 988.641 kb on - strand, within OH686_04800at 988.641 kb on - strand, within OH686_04800at 988.641 kb on - strand, within OH686_04800at 988.641 kb on - strand, within OH686_04800at 988.641 kb on - strand, within OH686_04800at 988.641 kb on - strand, within OH686_04800at 988.641 kb on - strand, within OH686_04800at 988.641 kb on - strand, within OH686_04800at 988.641 kb on - strand, within OH686_04800at 988.796 kb on + strand, within OH686_04800at 988.796 kb on + strand, within OH686_04800at 988.796 kb on + strand, within OH686_04800at 988.796 kb on + strand, within OH686_04800at 988.797 kb on - strand, within OH686_04800at 988.797 kb on - strand, within OH686_04800at 988.866 kb on - strand, within OH686_04800at 989.069 kb on + strand, within OH686_04800at 989.069 kb on + strand, within OH686_04800at 989.070 kb on - strand, within OH686_04800at 989.070 kb on - strand, within OH686_04800at 989.070 kb on - strand, within OH686_04800at 989.070 kb on - strand, within OH686_04800at 989.100 kb on - strand, within OH686_04800at 989.318 kb on + strand, within OH686_04800at 989.318 kb on + strand, within OH686_04800at 989.319 kb on - strand, within OH686_04800at 989.319 kb on - strand, within OH686_04800at 989.328 kb on - strand, within OH686_04800at 989.396 kb on + strand, within OH686_04800at 989.396 kb on + strand, within OH686_04800at 989.396 kb on + strand, within OH686_04800at 989.396 kb on + strand, within OH686_04800at 989.396 kb on + strand, within OH686_04800at 989.396 kb on + strand, within OH686_04800at 989.397 kb on - strand, within OH686_04800at 989.397 kb on - strand, within OH686_04800at 989.397 kb on - strand, within OH686_04800at 989.397 kb on - strand, within OH686_04800at 989.399 kb on + strand, within OH686_04800at 989.399 kb on + strand, within OH686_04800at 989.399 kb on + strand, within OH686_04800at 989.399 kb on + strand, within OH686_04800at 989.399 kb on + strand, within OH686_04800at 989.400 kb on - strand, within OH686_04800at 989.400 kb on - strand, within OH686_04800at 989.400 kb on - strand, within OH686_04800at 989.400 kb on - strand, within OH686_04800at 989.400 kb on - strand, within OH686_04800at 989.462 kb on + strand, within OH686_04800at 989.462 kb on + strand, within OH686_04800at 989.462 kb on + strand, within OH686_04800at 989.462 kb on + strand, within OH686_04800at 989.462 kb on + strand, within OH686_04800at 989.462 kb on + strand, within OH686_04800at 989.462 kb on + strand, within OH686_04800at 989.463 kb on - strand, within OH686_04800at 989.463 kb on - strand, within OH686_04800at 989.463 kb on - strand, within OH686_04800at 989.463 kb on - strand, within OH686_04800at 989.508 kb on - strand, within OH686_04800at 989.508 kb on - strand, within OH686_04800at 989.538 kb on - strand, within OH686_04800at 989.538 kb on - strand, within OH686_04800at 989.538 kb on - strand, within OH686_04800at 989.730 kb on - strand, within OH686_04800at 989.759 kb on + strand, within OH686_04800at 989.759 kb on + strand, within OH686_04800at 989.759 kb on + strand, within OH686_04800at 989.759 kb on + strand, within OH686_04800at 989.759 kb on + strand, within OH686_04800at 989.759 kb on + strand, within OH686_04800at 989.759 kb on + strand, within OH686_04800at 989.759 kb on + strand, within OH686_04800at 989.759 kb on + strand, within OH686_04800at 989.759 kb on + strand, within OH686_04800at 989.759 kb on + strand, within OH686_04800at 989.759 kb on + strand, within OH686_04800at 989.759 kb on + strand, within OH686_04800at 989.759 kb on + strand, within OH686_04800at 989.760 kb on - strand, within OH686_04800at 989.760 kb on - strand, within OH686_04800at 989.760 kb on - strand, within OH686_04800at 989.760 kb on - strand, within OH686_04800at 989.760 kb on - strand, within OH686_04800at 989.760 kb on - strand, within OH686_04800at 989.760 kb on - strand, within OH686_04800at 989.760 kb on - strand, within OH686_04800at 989.760 kb on - strand, within OH686_04800at 989.760 kb on - strand, within OH686_04800at 989.760 kb on - strand, within OH686_04800at 989.760 kb on - strand, within OH686_04800at 989.760 kb on - strand, within OH686_04800at 989.760 kb on - strand, within OH686_04800at 989.760 kb on - strand, within OH686_04800at 989.760 kb on - strand, within OH686_04800at 989.760 kb on - strand, within OH686_04800at 989.760 kb on - strand, within OH686_04800at 989.760 kb on - strand, within OH686_04800at 989.760 kb on - strand, within OH686_04800at 989.760 kb on - strand, within OH686_04800at 990.064 kb on + strand, within OH686_04800at 990.064 kb on + strand, within OH686_04800at 990.064 kb on + strand, within OH686_04800at 990.064 kb on + strand, within OH686_04800at 990.064 kb on + strand, within OH686_04800at 990.064 kb on + strand, within OH686_04800at 990.065 kb on - strand, within OH686_04800at 990.065 kb on - strand, within OH686_04800at 990.065 kb on - strand, within OH686_04800at 990.192 kb on + strandat 990.192 kb on + strandat 990.192 kb on + strandat 990.193 kb on - strandat 990.193 kb on - strandat 990.193 kb on - strandat 990.371 kb on + strandat 990.372 kb on - strandat 990.372 kb on - strandat 990.372 kb on - strandat 990.393 kb on + strandat 990.394 kb on - strandat 990.394 kb on - strandat 990.413 kb on + strandat 990.413 kb on + strandat 990.413 kb on + strandat 990.413 kb on + strandat 990.413 kb on + strandat 990.413 kb on + strandat 990.414 kb on - strandat 990.414 kb on - strandat 990.414 kb on - strandat 990.414 kb on - strandat 990.414 kb on - strandat 990.414 kb on - strandat 990.414 kb on - strandat 990.414 kb on - strandat 990.414 kb on - strandat 990.454 kb on + strandat 990.454 kb on + strandat 990.454 kb on + strandat 990.454 kb on + strandat 990.454 kb on + strandat 990.454 kb on + strandat 990.455 kb on - strandat 990.455 kb on - strandat 990.455 kb on - strandat 990.455 kb on - strandat 990.455 kb on - strandat 990.455 kb on - strandat 990.455 kb on - strandat 990.455 kb on - strandat 990.715 kb on + strand, within OH686_04805at 990.716 kb on - strand, within OH686_04805at 990.770 kb on + strand, within OH686_04805at 990.830 kb on - strand, within OH686_04805at 990.891 kb on - strand, within OH686_04805at 990.925 kb on + strand, within OH686_04805at 990.925 kb on + strand, within OH686_04805at 990.926 kb on - strand, within OH686_04805at 990.926 kb on - strand, within OH686_04805at 990.926 kb on - strand, within OH686_04805at 990.992 kb on + strand, within OH686_04805at 990.993 kb on - strand, within OH686_04805at 991.027 kb on + strand, within OH686_04805at 991.028 kb on - strand, within OH686_04805at 991.028 kb on - strand, within OH686_04805at 991.028 kb on - strand, within OH686_04805at 991.130 kb on + strand, within OH686_04805at 991.131 kb on - strand, within OH686_04805at 991.162 kb on + strand, within OH686_04805at 991.162 kb on + strand, within OH686_04805at 991.162 kb on + strand, within OH686_04805at 991.163 kb on - strand, within OH686_04805at 991.163 kb on - strand, within OH686_04805at 991.163 kb on - strand, within OH686_04805at 991.163 kb on - strand, within OH686_04805at 991.163 kb on - strand, within OH686_04805at 991.312 kb on + strand, within OH686_04805at 991.312 kb on + strand, within OH686_04805at 991.312 kb on + strand, within OH686_04805

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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987,127 + OH686_04795 0.28 -0.8
987,127 + OH686_04795 0.28 -2.2
987,206 + OH686_04795 0.35 -1.7
987,218 + OH686_04795 0.36 -0.6
987,218 + OH686_04795 0.36 -1.1
987,218 + OH686_04795 0.36 -2.4
987,219 - OH686_04795 0.36 -0.7
987,219 - OH686_04795 0.36 -1.0
987,469 + OH686_04795 0.58 +0.1
987,469 + OH686_04795 0.58 +0.7
987,469 + OH686_04795 0.58 -0.6
987,469 + OH686_04795 0.58 +0.4
987,469 + OH686_04795 0.58 -0.7
987,470 - OH686_04795 0.58 -1.7
987,470 - OH686_04795 0.58 -1.2
987,470 - OH686_04795 0.58 +1.0
987,470 - OH686_04795 0.58 +0.4
987,556 + OH686_04795 0.66 -0.4
987,556 + OH686_04795 0.66 +0.1
987,557 - OH686_04795 0.66 +0.4
987,557 - OH686_04795 0.66 -0.8
987,557 - OH686_04795 0.66 -2.1
987,557 - OH686_04795 0.66 -1.8
987,557 - OH686_04795 0.66 +0.8
987,557 - OH686_04795 0.66 -1.7
987,557 - OH686_04795 0.66 -0.7
987,557 - OH686_04795 0.66 +0.3
987,557 - OH686_04795 0.66 -0.5
987,821 + OH686_04795 0.89 -1.1
987,821 + OH686_04795 0.89 -0.9
987,822 - OH686_04795 0.89 -0.1
987,956 + +0.3
987,956 + -0.4
987,956 + -0.6
987,997 + -0.5
987,997 + +0.8
988,286 + -0.5
988,286 + +0.3
988,287 - +0.7
988,349 + OH686_04800 0.11 +0.8
988,349 + OH686_04800 0.11 +1.0
988,350 - OH686_04800 0.11 +0.0
988,376 + OH686_04800 0.12 +0.4
988,376 + OH686_04800 0.12 +1.0
988,376 + OH686_04800 0.12 -0.1
988,376 + OH686_04800 0.12 +1.0
988,376 + OH686_04800 0.12 +0.6
988,376 + OH686_04800 0.12 +0.8
988,376 + OH686_04800 0.12 +2.6
988,376 + OH686_04800 0.12 +1.2
988,376 + OH686_04800 0.12 +0.2
988,376 + OH686_04800 0.12 +1.0
988,377 - OH686_04800 0.12 +0.4
988,377 - OH686_04800 0.12 +1.2
988,377 - OH686_04800 0.12 -0.1
988,377 - OH686_04800 0.12 +0.8
988,377 - OH686_04800 0.12 +0.4
988,377 - OH686_04800 0.12 +0.7
988,505 + OH686_04800 0.18 -0.5
988,505 + OH686_04800 0.18 -0.1
988,505 + OH686_04800 0.18 -0.3
988,505 + OH686_04800 0.18 +0.0
988,506 - OH686_04800 0.18 +0.8
988,506 - OH686_04800 0.18 +0.6
988,506 - OH686_04800 0.18 +1.0
988,532 + OH686_04800 0.19 -0.5
988,640 + OH686_04800 0.24 +0.3
988,640 + OH686_04800 0.24 +1.2
988,640 + OH686_04800 0.24 +1.0
988,640 + OH686_04800 0.24 -0.1
988,640 + OH686_04800 0.24 +1.2
988,640 + OH686_04800 0.24 +1.0
988,640 + OH686_04800 0.24 -0.3
988,640 + OH686_04800 0.24 -1.2
988,640 + OH686_04800 0.24 +0.6
988,640 + OH686_04800 0.24 +0.8
988,640 + OH686_04800 0.24 +1.8
988,640 + OH686_04800 0.24 +0.8
988,641 - OH686_04800 0.24 -0.9
988,641 - OH686_04800 0.24 +0.6
988,641 - OH686_04800 0.24 +1.0
988,641 - OH686_04800 0.24 +0.1
988,641 - OH686_04800 0.24 +1.0
988,641 - OH686_04800 0.24 +0.8
988,641 - OH686_04800 0.24 -0.8
988,641 - OH686_04800 0.24 +1.7
988,641 - OH686_04800 0.24 +1.4
988,641 - OH686_04800 0.24 +0.8
988,641 - OH686_04800 0.24 +1.2
988,641 - OH686_04800 0.24 +0.7
988,796 + OH686_04800 0.31 +0.4
988,796 + OH686_04800 0.31 +0.9
988,796 + OH686_04800 0.31 +0.8
988,796 + OH686_04800 0.31 -0.6
988,797 - OH686_04800 0.31 +1.5
988,797 - OH686_04800 0.31 +0.8
988,866 - OH686_04800 0.34 +0.1
989,069 + OH686_04800 0.43 +0.9
989,069 + OH686_04800 0.43 +0.9
989,070 - OH686_04800 0.43 -0.5
989,070 - OH686_04800 0.43 +0.3
989,070 - OH686_04800 0.43 +0.3
989,070 - OH686_04800 0.43 -0.1
989,100 - OH686_04800 0.45 -0.3
989,318 + OH686_04800 0.55 +0.2
989,318 + OH686_04800 0.55 +0.2
989,319 - OH686_04800 0.55 +1.4
989,319 - OH686_04800 0.55 -1.4
989,328 - OH686_04800 0.55 +0.0
989,396 + OH686_04800 0.58 +1.2
989,396 + OH686_04800 0.58 +0.8
989,396 + OH686_04800 0.58 -0.1
989,396 + OH686_04800 0.58 -0.6
989,396 + OH686_04800 0.58 -0.8
989,396 + OH686_04800 0.58 -1.0
989,397 - OH686_04800 0.58 +1.8
989,397 - OH686_04800 0.58 -0.2
989,397 - OH686_04800 0.58 +1.0
989,397 - OH686_04800 0.58 -1.3
989,399 + OH686_04800 0.58 -0.2
989,399 + OH686_04800 0.58 +0.8
989,399 + OH686_04800 0.58 -0.8
989,399 + OH686_04800 0.58 +0.1
989,399 + OH686_04800 0.58 +0.2
989,400 - OH686_04800 0.58 +1.0
989,400 - OH686_04800 0.58 -0.3
989,400 - OH686_04800 0.58 -0.5
989,400 - OH686_04800 0.58 +0.7
989,400 - OH686_04800 0.58 -0.2
989,462 + OH686_04800 0.61 +0.4
989,462 + OH686_04800 0.61 +0.3
989,462 + OH686_04800 0.61 +1.6
989,462 + OH686_04800 0.61 +0.4
989,462 + OH686_04800 0.61 +0.4
989,462 + OH686_04800 0.61 +1.2
989,462 + OH686_04800 0.61 +1.0
989,463 - OH686_04800 0.61 +0.7
989,463 - OH686_04800 0.61 +0.6
989,463 - OH686_04800 0.61 +1.0
989,463 - OH686_04800 0.61 +0.6
989,508 - OH686_04800 0.63 +1.2
989,508 - OH686_04800 0.63 +0.1
989,538 - OH686_04800 0.64 +0.8
989,538 - OH686_04800 0.64 +0.4
989,538 - OH686_04800 0.64 -0.6
989,730 - OH686_04800 0.73 +0.6
989,759 + OH686_04800 0.74 -0.6
989,759 + OH686_04800 0.74 +0.6
989,759 + OH686_04800 0.74 -0.2
989,759 + OH686_04800 0.74 -0.2
989,759 + OH686_04800 0.74 +1.9
989,759 + OH686_04800 0.74 +1.5
989,759 + OH686_04800 0.74 +1.6
989,759 + OH686_04800 0.74 +0.8
989,759 + OH686_04800 0.74 +0.9
989,759 + OH686_04800 0.74 +0.7
989,759 + OH686_04800 0.74 -0.1
989,759 + OH686_04800 0.74 +0.9
989,759 + OH686_04800 0.74 +0.1
989,759 + OH686_04800 0.74 +1.6
989,760 - OH686_04800 0.74 +1.3
989,760 - OH686_04800 0.74 +1.2
989,760 - OH686_04800 0.74 +2.0
989,760 - OH686_04800 0.74 +0.3
989,760 - OH686_04800 0.74 -0.3
989,760 - OH686_04800 0.74 +0.4
989,760 - OH686_04800 0.74 +0.9
989,760 - OH686_04800 0.74 +0.8
989,760 - OH686_04800 0.74 +1.0
989,760 - OH686_04800 0.74 +1.6
989,760 - OH686_04800 0.74 +0.2
989,760 - OH686_04800 0.74 -0.1
989,760 - OH686_04800 0.74 +0.5
989,760 - OH686_04800 0.74 +1.4
989,760 - OH686_04800 0.74 +1.0
989,760 - OH686_04800 0.74 +1.8
989,760 - OH686_04800 0.74 +1.5
989,760 - OH686_04800 0.74 -1.0
989,760 - OH686_04800 0.74 +1.1
989,760 - OH686_04800 0.74 +0.4
989,760 - OH686_04800 0.74 +0.6
990,064 + OH686_04800 0.88 +0.1
990,064 + OH686_04800 0.88 +0.4
990,064 + OH686_04800 0.88 +0.1
990,064 + OH686_04800 0.88 +1.7
990,064 + OH686_04800 0.88 -0.2
990,064 + OH686_04800 0.88 +0.4
990,065 - OH686_04800 0.88 +0.9
990,065 - OH686_04800 0.88 +0.3
990,065 - OH686_04800 0.88 +0.2
990,192 + -1.3
990,192 + -0.2
990,192 + +0.0
990,193 - -0.8
990,193 - +0.2
990,193 - +0.8
990,371 + +0.8
990,372 - +0.4
990,372 - +0.2
990,372 - -0.2
990,393 + +0.0
990,394 - -0.2
990,394 - +0.1
990,413 + +1.3
990,413 + +0.1
990,413 + -0.4
990,413 + +0.2
990,413 + -0.6
990,413 + +0.8
990,414 - +0.0
990,414 - +1.7
990,414 - +0.1
990,414 - -0.8
990,414 - -0.4
990,414 - +1.0
990,414 - +0.2
990,414 - +0.1
990,414 - -0.2
990,454 + -1.0
990,454 + +0.3
990,454 + -0.3
990,454 + +0.2
990,454 + -0.6
990,454 + -0.7
990,455 - +0.3
990,455 - -0.3
990,455 - -0.4
990,455 - -0.4
990,455 - -0.1
990,455 - -0.1
990,455 - +0.0
990,455 - -0.5
990,715 + OH686_04805 0.24 +0.7
990,716 - OH686_04805 0.24 +0.4
990,770 + OH686_04805 0.29 -0.0
990,830 - OH686_04805 0.34 +0.0
990,891 - OH686_04805 0.40 +0.7
990,925 + OH686_04805 0.43 -1.7
990,925 + OH686_04805 0.43 -1.0
990,926 - OH686_04805 0.43 +0.7
990,926 - OH686_04805 0.43 +0.5
990,926 - OH686_04805 0.43 +0.4
990,992 + OH686_04805 0.49 +0.2
990,993 - OH686_04805 0.49 -0.3
991,027 + OH686_04805 0.52 -0.1
991,028 - OH686_04805 0.52 -2.0
991,028 - OH686_04805 0.52 +0.3
991,028 - OH686_04805 0.52 -1.0
991,130 + OH686_04805 0.61 +0.2
991,131 - OH686_04805 0.61 +0.8
991,162 + OH686_04805 0.64 +0.2
991,162 + OH686_04805 0.64 -0.6
991,162 + OH686_04805 0.64 +0.1
991,163 - OH686_04805 0.64 -1.7
991,163 - OH686_04805 0.64 -1.5
991,163 - OH686_04805 0.64 -0.0
991,163 - OH686_04805 0.64 +0.8
991,163 - OH686_04805 0.64 -2.0
991,312 + OH686_04805 0.78 +0.4
991,312 + OH686_04805 0.78 +0.6
991,312 + OH686_04805 0.78 +0.1

Or see this region's nucleotide sequence