Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_04615 and OH686_04620 overlap by 4 nucleotides OH686_04620 and OH686_04625 are separated by 2 nucleotides OH686_04625 and OH686_04630 are separated by 81 nucleotides OH686_04630 and OH686_04635 overlap by 9 nucleotides
OH686_04615: OH686_04615 - Branched-chain amino acid ABC transporter, permease protein LivM, at 958,143 to 959,402
_04615
OH686_04620: OH686_04620 - Branched-chain amino acid ABC transporter, ATP-binding protein LivG, at 959,399 to 960,166
_04620
OH686_04625: OH686_04625 - Branched-chain amino acid ABC transporter, ATP-binding protein LivF, at 960,169 to 960,870
_04625
OH686_04630: OH686_04630 - CDS, at 960,952 to 961,089
_04630
OH686_04635: OH686_04635 - Serine/threonine:Na+ symporter SstT, at 961,081 to 962,292
_04635
Position (kb) 960
961 Strain fitness (log2 ratio) -2
-1
0
1
2 at 959.301 kb on + strand at 959.561 kb on + strand, within OH686_04620 at 959.561 kb on + strand, within OH686_04620 at 959.561 kb on + strand, within OH686_04620 at 959.561 kb on + strand, within OH686_04620 at 959.561 kb on + strand, within OH686_04620 at 959.561 kb on + strand, within OH686_04620 at 959.562 kb on - strand, within OH686_04620 at 959.562 kb on - strand, within OH686_04620 at 959.562 kb on - strand, within OH686_04620 at 959.562 kb on - strand, within OH686_04620 at 959.650 kb on + strand, within OH686_04620 at 959.650 kb on + strand, within OH686_04620 at 959.650 kb on + strand, within OH686_04620 at 959.650 kb on + strand, within OH686_04620 at 959.795 kb on + strand, within OH686_04620 at 959.795 kb on + strand, within OH686_04620 at 959.795 kb on + strand, within OH686_04620 at 959.994 kb on + strand, within OH686_04620 at 959.995 kb on - strand, within OH686_04620 at 959.995 kb on - strand, within OH686_04620 at 959.995 kb on - strand, within OH686_04620 at 959.995 kb on - strand, within OH686_04620 at 959.995 kb on - strand, within OH686_04620 at 959.995 kb on - strand, within OH686_04620 at 959.995 kb on - strand, within OH686_04620 at 960.071 kb on + strand, within OH686_04620 at 960.071 kb on + strand, within OH686_04620 at 960.071 kb on + strand, within OH686_04620 at 960.071 kb on + strand, within OH686_04620 at 960.071 kb on + strand, within OH686_04620 at 960.071 kb on + strand, within OH686_04620 at 960.071 kb on + strand, within OH686_04620 at 960.071 kb on + strand, within OH686_04620 at 960.071 kb on + strand, within OH686_04620 at 960.071 kb on + strand, within OH686_04620 at 960.071 kb on + strand, within OH686_04620 at 960.071 kb on + strand, within OH686_04620 at 960.071 kb on + strand, within OH686_04620 at 960.071 kb on + strand, within OH686_04620 at 960.071 kb on + strand, within OH686_04620 at 960.071 kb on + strand, within OH686_04620 at 960.071 kb on + strand, within OH686_04620 at 960.071 kb on + strand, within OH686_04620 at 960.071 kb on + strand, within OH686_04620 at 960.071 kb on + strand, within OH686_04620 at 960.071 kb on + strand, within OH686_04620 at 960.071 kb on + strand, within OH686_04620 at 960.071 kb on + strand, within OH686_04620 at 960.071 kb on + strand, within OH686_04620 at 960.071 kb on + strand, within OH686_04620 at 960.071 kb on + strand, within OH686_04620 at 960.071 kb on + strand, within OH686_04620 at 960.071 kb on + strand, within OH686_04620 at 960.071 kb on + strand, within OH686_04620 at 960.072 kb on - strand, within OH686_04620 at 960.072 kb on - strand, within OH686_04620 at 960.072 kb on - strand, within OH686_04620 at 960.072 kb on - strand, within OH686_04620 at 960.072 kb on - strand, within OH686_04620 at 960.072 kb on - strand, within OH686_04620 at 960.072 kb on - strand, within OH686_04620 at 960.072 kb on - strand, within OH686_04620 at 960.072 kb on - strand, within OH686_04620 at 960.072 kb on - strand, within OH686_04620 at 960.072 kb on - strand, within OH686_04620 at 960.072 kb on - strand, within OH686_04620 at 960.072 kb on - strand, within OH686_04620 at 960.072 kb on - strand, within OH686_04620 at 960.072 kb on - strand, within OH686_04620 at 960.072 kb on - strand, within OH686_04620 at 960.072 kb on - strand, within OH686_04620 at 960.072 kb on - strand, within OH686_04620 at 960.072 kb on - strand, within OH686_04620 at 960.072 kb on - strand, within OH686_04620 at 960.072 kb on - strand, within OH686_04620 at 960.149 kb on + strand at 960.149 kb on + strand at 960.149 kb on + strand at 960.150 kb on - strand at 960.150 kb on - strand at 960.150 kb on - strand at 960.164 kb on + strand at 960.164 kb on + strand at 960.164 kb on + strand at 960.164 kb on + strand at 960.164 kb on + strand at 960.164 kb on + strand at 960.164 kb on + strand at 960.165 kb on - strand at 960.165 kb on - strand at 960.165 kb on - strand at 960.165 kb on - strand at 960.165 kb on - strand at 960.199 kb on + strand at 960.199 kb on + strand at 960.200 kb on - strand at 960.200 kb on - strand at 960.200 kb on - strand at 960.200 kb on - strand at 960.347 kb on - strand, within OH686_04625 at 960.347 kb on - strand, within OH686_04625 at 960.347 kb on - strand, within OH686_04625 at 960.347 kb on - strand, within OH686_04625 at 960.347 kb on - strand, within OH686_04625 at 960.458 kb on + strand, within OH686_04625 at 960.458 kb on + strand, within OH686_04625 at 960.458 kb on + strand, within OH686_04625 at 960.458 kb on + strand, within OH686_04625 at 960.458 kb on + strand, within OH686_04625 at 960.459 kb on - strand, within OH686_04625 at 960.459 kb on - strand, within OH686_04625 at 960.459 kb on - strand, within OH686_04625 at 960.459 kb on - strand, within OH686_04625 at 960.518 kb on + strand, within OH686_04625 at 960.518 kb on + strand, within OH686_04625 at 960.518 kb on + strand, within OH686_04625 at 960.518 kb on + strand, within OH686_04625 at 960.519 kb on - strand, within OH686_04625 at 960.519 kb on - strand, within OH686_04625 at 960.519 kb on - strand, within OH686_04625 at 960.519 kb on - strand, within OH686_04625 at 960.519 kb on - strand, within OH686_04625 at 960.519 kb on - strand, within OH686_04625 at 960.519 kb on - strand, within OH686_04625 at 960.519 kb on - strand, within OH686_04625 at 960.519 kb on - strand, within OH686_04625 at 960.709 kb on - strand, within OH686_04625 at 960.778 kb on + strand, within OH686_04625 at 960.778 kb on + strand, within OH686_04625 at 960.779 kb on - strand, within OH686_04625 at 960.779 kb on - strand, within OH686_04625 at 960.779 kb on - strand, within OH686_04625 at 960.779 kb on - strand, within OH686_04625 at 960.779 kb on - strand, within OH686_04625 at 960.856 kb on + strand at 960.856 kb on + strand at 960.856 kb on + strand at 960.857 kb on - strand at 960.857 kb on - strand at 960.857 kb on - strand at 960.918 kb on + strand at 960.919 kb on - strand at 960.953 kb on + strand at 960.954 kb on - strand at 960.954 kb on - strand at 960.955 kb on + strand at 960.955 kb on + strand at 960.955 kb on + strand at 960.956 kb on - strand at 960.956 kb on - strand at 960.956 kb on - strand at 960.956 kb on - strand at 960.956 kb on - strand at 961.333 kb on + strand, within OH686_04635 at 961.333 kb on + strand, within OH686_04635 at 961.333 kb on + strand, within OH686_04635 at 961.333 kb on + strand, within OH686_04635 at 961.333 kb on + strand, within OH686_04635 at 961.334 kb on - strand, within OH686_04635 at 961.334 kb on - strand, within OH686_04635 at 961.334 kb on - strand, within OH686_04635 at 961.334 kb on - strand, within OH686_04635 at 961.590 kb on - strand, within OH686_04635 at 961.590 kb on - strand, within OH686_04635 at 961.631 kb on + strand, within OH686_04635 at 961.631 kb on + strand, within OH686_04635 at 961.631 kb on + strand, within OH686_04635 at 961.631 kb on + strand, within OH686_04635 at 961.631 kb on + strand, within OH686_04635 at 961.631 kb on + strand, within OH686_04635 at 961.632 kb on - strand, within OH686_04635 at 961.632 kb on - strand, within OH686_04635
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 959,301 + +1.2 959,561 + OH686_04620 0.21 +0.4 959,561 + OH686_04620 0.21 +0.2 959,561 + OH686_04620 0.21 +1.0 959,561 + OH686_04620 0.21 +0.2 959,561 + OH686_04620 0.21 +0.4 959,561 + OH686_04620 0.21 +0.7 959,562 - OH686_04620 0.21 -0.8 959,562 - OH686_04620 0.21 +0.8 959,562 - OH686_04620 0.21 +0.6 959,562 - OH686_04620 0.21 +1.6 959,650 + OH686_04620 0.33 +0.7 959,650 + OH686_04620 0.33 +0.9 959,650 + OH686_04620 0.33 +0.2 959,650 + OH686_04620 0.33 +1.5 959,795 + OH686_04620 0.52 +1.0 959,795 + OH686_04620 0.52 +0.8 959,795 + OH686_04620 0.52 +0.7 959,994 + OH686_04620 0.77 +0.3 959,995 - OH686_04620 0.78 +0.9 959,995 - OH686_04620 0.78 +1.2 959,995 - OH686_04620 0.78 +0.4 959,995 - OH686_04620 0.78 +0.5 959,995 - OH686_04620 0.78 +1.2 959,995 - OH686_04620 0.78 +0.5 959,995 - OH686_04620 0.78 +1.1 960,071 + OH686_04620 0.88 +0.8 960,071 + OH686_04620 0.88 +0.8 960,071 + OH686_04620 0.88 +0.9 960,071 + OH686_04620 0.88 +1.4 960,071 + OH686_04620 0.88 +0.9 960,071 + OH686_04620 0.88 +0.6 960,071 + OH686_04620 0.88 -0.2 960,071 + OH686_04620 0.88 +0.5 960,071 + OH686_04620 0.88 +1.2 960,071 + OH686_04620 0.88 +0.0 960,071 + OH686_04620 0.88 +1.0 960,071 + OH686_04620 0.88 +1.0 960,071 + OH686_04620 0.88 -0.2 960,071 + OH686_04620 0.88 +1.1 960,071 + OH686_04620 0.88 +0.9 960,071 + OH686_04620 0.88 +0.9 960,071 + OH686_04620 0.88 +0.9 960,071 + OH686_04620 0.88 +0.8 960,071 + OH686_04620 0.88 -0.7 960,071 + OH686_04620 0.88 +1.3 960,071 + OH686_04620 0.88 +0.1 960,071 + OH686_04620 0.88 +0.6 960,071 + OH686_04620 0.88 +0.1 960,071 + OH686_04620 0.88 +0.1 960,071 + OH686_04620 0.88 +0.5 960,071 + OH686_04620 0.88 +0.6 960,071 + OH686_04620 0.88 +1.0 960,071 + OH686_04620 0.88 +0.4 960,071 + OH686_04620 0.88 -1.1 960,072 - OH686_04620 0.88 +0.5 960,072 - OH686_04620 0.88 +0.9 960,072 - OH686_04620 0.88 +1.2 960,072 - OH686_04620 0.88 +0.5 960,072 - OH686_04620 0.88 -0.1 960,072 - OH686_04620 0.88 +1.1 960,072 - OH686_04620 0.88 -0.7 960,072 - OH686_04620 0.88 +0.8 960,072 - OH686_04620 0.88 +1.4 960,072 - OH686_04620 0.88 +0.6 960,072 - OH686_04620 0.88 +1.1 960,072 - OH686_04620 0.88 +0.6 960,072 - OH686_04620 0.88 +0.9 960,072 - OH686_04620 0.88 +0.4 960,072 - OH686_04620 0.88 +0.6 960,072 - OH686_04620 0.88 +0.6 960,072 - OH686_04620 0.88 +0.9 960,072 - OH686_04620 0.88 +0.7 960,072 - OH686_04620 0.88 -1.1 960,072 - OH686_04620 0.88 +0.8 960,072 - OH686_04620 0.88 +0.0 960,149 + +0.5 960,149 + +0.7 960,149 + +0.7 960,150 - +0.6 960,150 - +0.5 960,150 - +0.4 960,164 + -0.6 960,164 + -0.2 960,164 + +0.4 960,164 + -0.2 960,164 + -0.4 960,164 + +0.1 960,164 + +1.4 960,165 - +0.1 960,165 - +0.7 960,165 - +0.7 960,165 - +0.4 960,165 - +0.0 960,199 + +0.1 960,199 + +0.3 960,200 - +0.7 960,200 - +0.5 960,200 - +1.0 960,200 - +0.9 960,347 - OH686_04625 0.25 +1.0 960,347 - OH686_04625 0.25 +1.4 960,347 - OH686_04625 0.25 +0.7 960,347 - OH686_04625 0.25 +1.0 960,347 - OH686_04625 0.25 +1.1 960,458 + OH686_04625 0.41 +0.7 960,458 + OH686_04625 0.41 -0.3 960,458 + OH686_04625 0.41 +1.7 960,458 + OH686_04625 0.41 +0.9 960,458 + OH686_04625 0.41 +0.8 960,459 - OH686_04625 0.41 -0.2 960,459 - OH686_04625 0.41 +0.7 960,459 - OH686_04625 0.41 +0.8 960,459 - OH686_04625 0.41 +2.1 960,518 + OH686_04625 0.50 +1.4 960,518 + OH686_04625 0.50 -0.2 960,518 + OH686_04625 0.50 +0.7 960,518 + OH686_04625 0.50 +1.1 960,519 - OH686_04625 0.50 +1.7 960,519 - OH686_04625 0.50 +1.0 960,519 - OH686_04625 0.50 +0.9 960,519 - OH686_04625 0.50 +0.7 960,519 - OH686_04625 0.50 +0.4 960,519 - OH686_04625 0.50 +1.0 960,519 - OH686_04625 0.50 +1.5 960,519 - OH686_04625 0.50 +0.7 960,519 - OH686_04625 0.50 +0.2 960,709 - OH686_04625 0.77 +1.6 960,778 + OH686_04625 0.87 +0.4 960,778 + OH686_04625 0.87 +0.4 960,779 - OH686_04625 0.87 +1.5 960,779 - OH686_04625 0.87 -0.1 960,779 - OH686_04625 0.87 +1.5 960,779 - OH686_04625 0.87 +1.5 960,779 - OH686_04625 0.87 +0.3 960,856 + +0.8 960,856 + +0.8 960,856 + -0.2 960,857 - +0.9 960,857 - +1.4 960,857 - +0.8 960,918 + -0.2 960,919 - -0.5 960,953 + -0.3 960,954 - +0.8 960,954 - -0.7 960,955 + +0.3 960,955 + +1.2 960,955 + -0.8 960,956 - +0.2 960,956 - -0.1 960,956 - -0.4 960,956 - -1.1 960,956 - +0.1 961,333 + OH686_04635 0.21 +2.2 961,333 + OH686_04635 0.21 -0.6 961,333 + OH686_04635 0.21 -1.4 961,333 + OH686_04635 0.21 -0.8 961,333 + OH686_04635 0.21 -0.2 961,334 - OH686_04635 0.21 +0.9 961,334 - OH686_04635 0.21 -1.5 961,334 - OH686_04635 0.21 -0.1 961,334 - OH686_04635 0.21 -0.7 961,590 - OH686_04635 0.42 -0.6 961,590 - OH686_04635 0.42 -1.3 961,631 + OH686_04635 0.45 +0.7 961,631 + OH686_04635 0.45 -0.1 961,631 + OH686_04635 0.45 -0.3 961,631 + OH686_04635 0.45 -0.5 961,631 + OH686_04635 0.45 -0.9 961,631 + OH686_04635 0.45 +0.1 961,632 - OH686_04635 0.45 -2.1 961,632 - OH686_04635 0.45 -0.4
Or see this region's nucleotide sequence