Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_04480 and OH686_04485 are separated by 174 nucleotides OH686_04485 and OH686_04490 are separated by 115 nucleotides
OH686_04480: OH686_04480 - 3-isopropylmalate dehydratase large subunit , at 933,151 to 934,578
_04480
OH686_04485: OH686_04485 - Transcriptional regulator, LysR family, at 934,753 to 935,631
_04485
OH686_04490: OH686_04490 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 935,747 to 938,665
_04490
Position (kb) 934
935
936 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 933.836 kb on + strand, within OH686_04480 at 933.836 kb on + strand, within OH686_04480 at 933.836 kb on + strand, within OH686_04480 at 933.836 kb on + strand, within OH686_04480 at 933.836 kb on + strand, within OH686_04480 at 933.837 kb on - strand, within OH686_04480 at 933.837 kb on - strand, within OH686_04480 at 933.837 kb on - strand, within OH686_04480 at 933.837 kb on - strand, within OH686_04480 at 933.837 kb on - strand, within OH686_04480 at 933.837 kb on - strand, within OH686_04480 at 934.164 kb on + strand, within OH686_04480 at 934.312 kb on + strand, within OH686_04480 at 934.313 kb on - strand, within OH686_04480 at 934.404 kb on + strand, within OH686_04480 at 934.499 kb on + strand at 934.499 kb on + strand at 934.499 kb on + strand at 934.499 kb on + strand at 934.500 kb on - strand at 934.500 kb on - strand at 934.500 kb on - strand at 934.500 kb on - strand at 934.500 kb on - strand at 934.500 kb on - strand at 934.531 kb on + strand at 934.531 kb on + strand at 934.531 kb on + strand at 934.531 kb on + strand at 934.542 kb on + strand at 934.543 kb on - strand at 934.543 kb on - strand at 934.543 kb on - strand at 934.559 kb on + strand at 934.560 kb on - strand at 934.560 kb on - strand at 934.560 kb on - strand at 934.560 kb on - strand at 934.560 kb on - strand at 934.583 kb on + strand at 934.583 kb on + strand at 934.583 kb on + strand at 934.583 kb on + strand at 934.583 kb on + strand at 934.583 kb on + strand at 934.583 kb on + strand at 934.583 kb on + strand at 934.583 kb on + strand at 934.583 kb on + strand at 934.583 kb on + strand at 934.583 kb on + strand at 934.584 kb on - strand at 934.584 kb on - strand at 934.584 kb on - strand at 934.584 kb on - strand at 934.584 kb on - strand at 934.584 kb on - strand at 934.584 kb on - strand at 934.584 kb on - strand at 934.584 kb on - strand at 934.619 kb on + strand at 934.619 kb on + strand at 934.619 kb on + strand at 934.619 kb on + strand at 934.619 kb on + strand at 934.619 kb on + strand at 934.619 kb on + strand at 934.619 kb on + strand at 934.619 kb on + strand at 934.619 kb on + strand at 934.619 kb on + strand at 934.620 kb on - strand at 934.620 kb on - strand at 934.620 kb on - strand at 934.620 kb on - strand at 934.620 kb on - strand at 934.620 kb on - strand at 934.620 kb on - strand at 934.620 kb on - strand at 934.620 kb on - strand at 934.620 kb on - strand at 934.620 kb on - strand at 934.621 kb on + strand at 934.621 kb on + strand at 934.621 kb on + strand at 934.621 kb on + strand at 934.622 kb on - strand at 934.622 kb on - strand at 934.622 kb on - strand at 934.647 kb on + strand at 934.665 kb on - strand at 934.718 kb on + strand at 934.718 kb on + strand at 934.719 kb on - strand at 934.719 kb on - strand at 934.719 kb on - strand at 934.719 kb on - strand at 934.720 kb on + strand at 934.886 kb on + strand, within OH686_04485 at 934.886 kb on + strand, within OH686_04485 at 934.886 kb on + strand, within OH686_04485 at 934.886 kb on + strand, within OH686_04485 at 934.886 kb on + strand, within OH686_04485 at 934.886 kb on + strand, within OH686_04485 at 934.886 kb on + strand, within OH686_04485 at 934.886 kb on + strand, within OH686_04485 at 934.886 kb on + strand, within OH686_04485 at 934.886 kb on + strand, within OH686_04485 at 934.886 kb on + strand, within OH686_04485 at 934.886 kb on + strand, within OH686_04485 at 934.887 kb on - strand, within OH686_04485 at 934.887 kb on - strand, within OH686_04485 at 934.887 kb on - strand, within OH686_04485 at 934.887 kb on - strand, within OH686_04485 at 934.887 kb on - strand, within OH686_04485 at 934.887 kb on - strand, within OH686_04485 at 934.887 kb on - strand, within OH686_04485 at 934.887 kb on - strand, within OH686_04485 at 934.887 kb on - strand, within OH686_04485 at 934.887 kb on - strand, within OH686_04485 at 934.887 kb on - strand, within OH686_04485 at 934.887 kb on - strand, within OH686_04485 at 934.887 kb on - strand, within OH686_04485 at 934.887 kb on - strand, within OH686_04485 at 934.958 kb on - strand, within OH686_04485 at 934.974 kb on - strand, within OH686_04485 at 935.053 kb on - strand, within OH686_04485 at 935.101 kb on + strand, within OH686_04485 at 935.101 kb on + strand, within OH686_04485 at 935.102 kb on - strand, within OH686_04485 at 935.149 kb on + strand, within OH686_04485 at 935.149 kb on + strand, within OH686_04485 at 935.149 kb on + strand, within OH686_04485 at 935.149 kb on + strand, within OH686_04485 at 935.150 kb on - strand, within OH686_04485 at 935.346 kb on + strand, within OH686_04485 at 935.347 kb on - strand, within OH686_04485 at 935.361 kb on + strand, within OH686_04485 at 935.361 kb on + strand, within OH686_04485 at 935.362 kb on - strand, within OH686_04485 at 935.362 kb on - strand, within OH686_04485 at 935.422 kb on + strand, within OH686_04485 at 935.422 kb on + strand, within OH686_04485 at 935.422 kb on + strand, within OH686_04485 at 935.422 kb on + strand, within OH686_04485 at 935.422 kb on + strand, within OH686_04485 at 935.423 kb on - strand, within OH686_04485 at 935.423 kb on - strand, within OH686_04485 at 935.423 kb on - strand, within OH686_04485 at 935.423 kb on - strand, within OH686_04485 at 935.423 kb on - strand, within OH686_04485 at 935.423 kb on - strand, within OH686_04485 at 935.548 kb on + strand at 935.548 kb on + strand at 935.549 kb on - strand at 935.549 kb on - strand at 935.549 kb on - strand at 935.549 kb on - strand at 935.549 kb on - strand at 935.596 kb on - strand at 935.596 kb on - strand at 935.660 kb on + strand at 935.660 kb on + strand at 935.660 kb on + strand at 935.660 kb on + strand at 935.661 kb on - strand at 935.661 kb on - strand at 935.661 kb on - strand at 935.666 kb on + strand at 935.673 kb on + strand at 935.689 kb on + strand at 935.690 kb on - strand at 935.690 kb on - strand at 935.780 kb on - strand at 935.969 kb on + strand at 935.969 kb on + strand at 935.969 kb on + strand at 935.969 kb on + strand at 935.969 kb on + strand at 935.969 kb on + strand at 935.970 kb on - strand at 935.970 kb on - strand at 935.970 kb on - strand at 935.970 kb on - strand at 936.090 kb on + strand, within OH686_04490 at 936.090 kb on + strand, within OH686_04490 at 936.090 kb on + strand, within OH686_04490 at 936.090 kb on + strand, within OH686_04490 at 936.090 kb on + strand, within OH686_04490 at 936.091 kb on - strand, within OH686_04490 at 936.091 kb on - strand, within OH686_04490 at 936.091 kb on - strand, within OH686_04490 at 936.091 kb on - strand, within OH686_04490 at 936.091 kb on - strand, within OH686_04490 at 936.091 kb on - strand, within OH686_04490 at 936.091 kb on - strand, within OH686_04490 at 936.091 kb on - strand, within OH686_04490 at 936.332 kb on + strand, within OH686_04490 at 936.366 kb on + strand, within OH686_04490 at 936.366 kb on + strand, within OH686_04490 at 936.367 kb on - strand, within OH686_04490 at 936.367 kb on - strand, within OH686_04490 at 936.434 kb on + strand, within OH686_04490 at 936.446 kb on + strand, within OH686_04490 at 936.446 kb on + strand, within OH686_04490 at 936.447 kb on - strand, within OH686_04490 at 936.447 kb on - strand, within OH686_04490 at 936.447 kb on - strand, within OH686_04490 at 936.615 kb on + strand, within OH686_04490 at 936.615 kb on + strand, within OH686_04490 at 936.615 kb on + strand, within OH686_04490 at 936.616 kb on - strand, within OH686_04490 at 936.616 kb on - strand, within OH686_04490 at 936.616 kb on - strand, within OH686_04490
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 933,836 + OH686_04480 0.48 -3.6 933,836 + OH686_04480 0.48 -2.4 933,836 + OH686_04480 0.48 -0.8 933,836 + OH686_04480 0.48 -2.3 933,836 + OH686_04480 0.48 -2.8 933,837 - OH686_04480 0.48 -3.6 933,837 - OH686_04480 0.48 -3.3 933,837 - OH686_04480 0.48 -3.4 933,837 - OH686_04480 0.48 -2.4 933,837 - OH686_04480 0.48 -4.6 933,837 - OH686_04480 0.48 -4.7 934,164 + OH686_04480 0.71 -0.3 934,312 + OH686_04480 0.81 -1.8 934,313 - OH686_04480 0.81 -3.2 934,404 + OH686_04480 0.88 -2.3 934,499 + -2.6 934,499 + -0.2 934,499 + -1.2 934,499 + -3.9 934,500 - -4.0 934,500 - -3.8 934,500 - -4.3 934,500 - -4.2 934,500 - -1.7 934,500 - -3.3 934,531 + -2.0 934,531 + -2.6 934,531 + -4.1 934,531 + -0.3 934,542 + -1.6 934,543 - -1.9 934,543 - -1.1 934,543 - -2.6 934,559 + -1.0 934,560 - -2.2 934,560 - -2.7 934,560 - -2.9 934,560 - -2.1 934,560 - -2.2 934,583 + -1.7 934,583 + -3.3 934,583 + -1.6 934,583 + -1.8 934,583 + -3.7 934,583 + -1.3 934,583 + -3.3 934,583 + -3.1 934,583 + -2.5 934,583 + -1.0 934,583 + -3.3 934,583 + -3.0 934,584 - -3.0 934,584 - -0.6 934,584 - -3.2 934,584 - -2.4 934,584 - -2.3 934,584 - -3.7 934,584 - -3.3 934,584 - -2.8 934,584 - -3.3 934,619 + -3.2 934,619 + -4.2 934,619 + -2.4 934,619 + -3.0 934,619 + -2.2 934,619 + -3.6 934,619 + -3.6 934,619 + -3.7 934,619 + -0.3 934,619 + -2.0 934,619 + -1.0 934,620 - +0.3 934,620 - -0.1 934,620 - -0.3 934,620 - -1.0 934,620 - +0.5 934,620 - -0.6 934,620 - -0.3 934,620 - +0.8 934,620 - +0.4 934,620 - +0.1 934,620 - -0.6 934,621 + -2.6 934,621 + -1.0 934,621 + -5.0 934,621 + -1.1 934,622 - -0.2 934,622 - +0.5 934,622 - +1.2 934,647 + -0.3 934,665 - +0.4 934,718 + -0.0 934,718 + -1.5 934,719 - +0.7 934,719 - -0.8 934,719 - +1.1 934,719 - +0.4 934,720 + +0.6 934,886 + OH686_04485 0.15 -1.5 934,886 + OH686_04485 0.15 +0.3 934,886 + OH686_04485 0.15 +0.6 934,886 + OH686_04485 0.15 +0.3 934,886 + OH686_04485 0.15 +0.1 934,886 + OH686_04485 0.15 -1.1 934,886 + OH686_04485 0.15 -2.4 934,886 + OH686_04485 0.15 +1.2 934,886 + OH686_04485 0.15 +0.5 934,886 + OH686_04485 0.15 -0.0 934,886 + OH686_04485 0.15 +0.6 934,886 + OH686_04485 0.15 -0.1 934,887 - OH686_04485 0.15 +0.8 934,887 - OH686_04485 0.15 -0.7 934,887 - OH686_04485 0.15 +0.8 934,887 - OH686_04485 0.15 +1.0 934,887 - OH686_04485 0.15 +0.2 934,887 - OH686_04485 0.15 +0.9 934,887 - OH686_04485 0.15 +0.6 934,887 - OH686_04485 0.15 +0.2 934,887 - OH686_04485 0.15 +0.2 934,887 - OH686_04485 0.15 +0.7 934,887 - OH686_04485 0.15 +0.7 934,887 - OH686_04485 0.15 +0.7 934,887 - OH686_04485 0.15 -0.8 934,887 - OH686_04485 0.15 +1.0 934,958 - OH686_04485 0.23 +0.9 934,974 - OH686_04485 0.25 -0.0 935,053 - OH686_04485 0.34 +0.2 935,101 + OH686_04485 0.40 -0.4 935,101 + OH686_04485 0.40 +1.2 935,102 - OH686_04485 0.40 +0.6 935,149 + OH686_04485 0.45 +0.2 935,149 + OH686_04485 0.45 -0.3 935,149 + OH686_04485 0.45 +1.6 935,149 + OH686_04485 0.45 +0.9 935,150 - OH686_04485 0.45 +0.6 935,346 + OH686_04485 0.67 +0.1 935,347 - OH686_04485 0.68 +1.9 935,361 + OH686_04485 0.69 +0.4 935,361 + OH686_04485 0.69 +0.3 935,362 - OH686_04485 0.69 +0.8 935,362 - OH686_04485 0.69 +0.5 935,422 + OH686_04485 0.76 +0.0 935,422 + OH686_04485 0.76 +0.1 935,422 + OH686_04485 0.76 +0.2 935,422 + OH686_04485 0.76 +0.5 935,422 + OH686_04485 0.76 +0.1 935,423 - OH686_04485 0.76 -0.6 935,423 - OH686_04485 0.76 +1.1 935,423 - OH686_04485 0.76 +0.7 935,423 - OH686_04485 0.76 +0.9 935,423 - OH686_04485 0.76 +0.0 935,423 - OH686_04485 0.76 +0.3 935,548 + +0.9 935,548 + -0.2 935,549 - +1.2 935,549 - +1.1 935,549 - -0.6 935,549 - -0.2 935,549 - +0.5 935,596 - -0.0 935,596 - +0.8 935,660 + -0.5 935,660 + -0.2 935,660 + -0.9 935,660 + +0.4 935,661 - +0.7 935,661 - -0.7 935,661 - +1.5 935,666 + -1.1 935,673 + -0.3 935,689 + -0.5 935,690 - +0.4 935,690 - +0.7 935,780 - +0.5 935,969 + +0.2 935,969 + -0.6 935,969 + +1.8 935,969 + +0.7 935,969 + +2.0 935,969 + -0.8 935,970 - +1.0 935,970 - -0.9 935,970 - +1.0 935,970 - +0.2 936,090 + OH686_04490 0.12 -1.1 936,090 + OH686_04490 0.12 +0.8 936,090 + OH686_04490 0.12 +0.1 936,090 + OH686_04490 0.12 -0.7 936,090 + OH686_04490 0.12 +0.2 936,091 - OH686_04490 0.12 +0.2 936,091 - OH686_04490 0.12 +0.3 936,091 - OH686_04490 0.12 -0.3 936,091 - OH686_04490 0.12 -0.4 936,091 - OH686_04490 0.12 +1.0 936,091 - OH686_04490 0.12 -0.1 936,091 - OH686_04490 0.12 +0.1 936,091 - OH686_04490 0.12 -0.6 936,332 + OH686_04490 0.20 -0.2 936,366 + OH686_04490 0.21 +0.1 936,366 + OH686_04490 0.21 -1.7 936,367 - OH686_04490 0.21 +0.1 936,367 - OH686_04490 0.21 -0.2 936,434 + OH686_04490 0.24 +0.9 936,446 + OH686_04490 0.24 -0.2 936,446 + OH686_04490 0.24 -0.0 936,447 - OH686_04490 0.24 +0.7 936,447 - OH686_04490 0.24 +0.7 936,447 - OH686_04490 0.24 +1.0 936,615 + OH686_04490 0.30 +0.3 936,615 + OH686_04490 0.30 -0.5 936,615 + OH686_04490 0.30 +0.0 936,616 - OH686_04490 0.30 +0.8 936,616 - OH686_04490 0.30 -0.7 936,616 - OH686_04490 0.30 -0.7
Or see this region's nucleotide sequence