Strain Fitness in Pseudomonas sp. S08-1 around OH686_03160

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOH686_03155 and OH686_03160 overlap by 12 nucleotidesOH686_03160 and OH686_03165 are separated by 85 nucleotidesOH686_03165 and OH686_03170 are separated by 1 nucleotides OH686_03155: OH686_03155 - Transcriptional regulator, AraC family, at 660,159 to 661,169 _03155 OH686_03160: OH686_03160 - Transcriptional regulator, YafY family, at 661,158 to 662,108 _03160 OH686_03165: OH686_03165 - Glutathione S-transferase , at 662,194 to 662,901 _03165 OH686_03170: OH686_03170 - Phosphoglycerol transferase-related protein, alkaline phosphatase superfamily, at 662,903 to 664,978 _03170 Position (kb) 661 662 663Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 660.207 kb on + strandat 660.208 kb on - strandat 660.208 kb on - strandat 660.208 kb on - strandat 660.399 kb on + strand, within OH686_03155at 660.399 kb on + strand, within OH686_03155at 660.399 kb on + strand, within OH686_03155at 660.400 kb on - strand, within OH686_03155at 660.400 kb on - strand, within OH686_03155at 660.400 kb on - strand, within OH686_03155at 660.483 kb on + strand, within OH686_03155at 660.483 kb on + strand, within OH686_03155at 660.483 kb on + strand, within OH686_03155at 660.483 kb on + strand, within OH686_03155at 660.483 kb on + strand, within OH686_03155at 660.483 kb on + strand, within OH686_03155at 660.483 kb on + strand, within OH686_03155at 660.483 kb on + strand, within OH686_03155at 660.483 kb on + strand, within OH686_03155at 660.483 kb on + strand, within OH686_03155at 660.483 kb on + strand, within OH686_03155at 660.483 kb on + strand, within OH686_03155at 660.483 kb on + strand, within OH686_03155at 660.483 kb on + strand, within OH686_03155at 660.483 kb on + strand, within OH686_03155at 660.483 kb on + strand, within OH686_03155at 660.483 kb on + strand, within OH686_03155at 660.483 kb on + strand, within OH686_03155at 660.483 kb on + strand, within OH686_03155at 660.484 kb on - strand, within OH686_03155at 660.484 kb on - strand, within OH686_03155at 660.484 kb on - strand, within OH686_03155at 660.484 kb on - strand, within OH686_03155at 660.484 kb on - strand, within OH686_03155at 661.435 kb on + strand, within OH686_03160at 661.436 kb on - strand, within OH686_03160at 661.436 kb on - strand, within OH686_03160at 661.436 kb on - strand, within OH686_03160at 661.436 kb on - strand, within OH686_03160at 661.471 kb on + strand, within OH686_03160at 661.471 kb on + strand, within OH686_03160at 661.472 kb on - strand, within OH686_03160at 661.472 kb on - strand, within OH686_03160at 661.472 kb on - strand, within OH686_03160at 661.573 kb on + strand, within OH686_03160at 661.573 kb on + strand, within OH686_03160at 661.573 kb on + strand, within OH686_03160at 661.573 kb on + strand, within OH686_03160at 661.574 kb on - strand, within OH686_03160at 661.574 kb on - strand, within OH686_03160at 661.574 kb on - strand, within OH686_03160at 661.574 kb on - strand, within OH686_03160at 661.630 kb on + strand, within OH686_03160at 661.630 kb on + strand, within OH686_03160at 661.631 kb on - strand, within OH686_03160at 661.653 kb on + strand, within OH686_03160at 661.653 kb on + strand, within OH686_03160at 661.653 kb on + strand, within OH686_03160at 661.653 kb on + strand, within OH686_03160at 661.653 kb on + strand, within OH686_03160at 661.654 kb on - strand, within OH686_03160at 661.654 kb on - strand, within OH686_03160at 661.990 kb on + strand, within OH686_03160at 661.990 kb on + strand, within OH686_03160at 661.990 kb on + strand, within OH686_03160at 661.990 kb on + strand, within OH686_03160at 661.991 kb on - strand, within OH686_03160at 662.077 kb on - strandat 662.077 kb on - strandat 662.126 kb on - strandat 662.126 kb on - strandat 662.126 kb on - strandat 662.126 kb on - strandat 662.126 kb on - strandat 662.126 kb on - strandat 662.138 kb on + strandat 662.139 kb on - strandat 662.139 kb on - strandat 662.140 kb on + strandat 662.140 kb on + strandat 662.140 kb on + strandat 662.149 kb on + strandat 662.155 kb on + strandat 662.156 kb on + strandat 662.156 kb on + strandat 662.156 kb on + strandat 662.156 kb on + strandat 662.156 kb on + strandat 662.156 kb on + strandat 662.156 kb on + strandat 662.157 kb on - strandat 662.157 kb on - strandat 662.157 kb on - strandat 662.157 kb on - strandat 662.157 kb on - strandat 662.157 kb on - strandat 662.157 kb on - strandat 662.157 kb on - strandat 662.176 kb on + strandat 662.177 kb on - strandat 662.212 kb on + strandat 662.212 kb on + strandat 662.212 kb on + strandat 662.212 kb on + strandat 662.212 kb on + strandat 662.212 kb on + strandat 662.212 kb on + strandat 662.212 kb on + strandat 662.213 kb on - strandat 662.213 kb on - strandat 662.213 kb on - strandat 662.213 kb on - strandat 662.213 kb on - strandat 662.213 kb on - strandat 662.213 kb on - strandat 662.275 kb on + strand, within OH686_03165at 662.275 kb on + strand, within OH686_03165at 662.323 kb on + strand, within OH686_03165at 662.323 kb on + strand, within OH686_03165at 662.323 kb on + strand, within OH686_03165at 662.323 kb on + strand, within OH686_03165at 662.324 kb on - strand, within OH686_03165at 662.324 kb on - strand, within OH686_03165at 662.324 kb on - strand, within OH686_03165at 662.324 kb on - strand, within OH686_03165at 662.468 kb on - strand, within OH686_03165at 662.468 kb on - strand, within OH686_03165at 662.468 kb on - strand, within OH686_03165at 662.480 kb on + strand, within OH686_03165at 662.481 kb on - strand, within OH686_03165at 662.542 kb on + strand, within OH686_03165at 662.542 kb on + strand, within OH686_03165at 662.542 kb on + strand, within OH686_03165at 662.543 kb on - strand, within OH686_03165at 662.543 kb on - strand, within OH686_03165at 662.543 kb on - strand, within OH686_03165at 662.543 kb on - strand, within OH686_03165at 662.543 kb on - strand, within OH686_03165at 662.689 kb on + strand, within OH686_03165at 662.690 kb on - strand, within OH686_03165at 662.690 kb on - strand, within OH686_03165at 662.690 kb on - strand, within OH686_03165at 662.690 kb on - strand, within OH686_03165at 662.690 kb on - strand, within OH686_03165at 662.690 kb on - strand, within OH686_03165at 662.690 kb on - strand, within OH686_03165at 662.719 kb on + strand, within OH686_03165at 662.720 kb on - strand, within OH686_03165at 662.767 kb on + strand, within OH686_03165at 662.768 kb on - strand, within OH686_03165at 662.768 kb on - strand, within OH686_03165at 662.768 kb on - strand, within OH686_03165at 662.803 kb on + strand, within OH686_03165at 662.803 kb on + strand, within OH686_03165at 662.803 kb on + strand, within OH686_03165at 662.804 kb on - strand, within OH686_03165at 662.836 kb on + strandat 662.836 kb on + strandat 662.836 kb on + strandat 662.836 kb on + strandat 662.836 kb on + strandat 662.836 kb on + strandat 662.837 kb on - strandat 662.837 kb on - strandat 662.837 kb on - strandat 662.837 kb on - strandat 662.837 kb on - strandat 662.837 kb on - strandat 662.859 kb on + strandat 662.859 kb on + strandat 662.859 kb on + strandat 662.860 kb on - strandat 662.860 kb on - strandat 662.899 kb on + strandat 662.899 kb on + strandat 662.899 kb on + strandat 662.900 kb on - strandat 662.900 kb on - strandat 663.069 kb on + strandat 663.070 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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660,207 + -0.5
660,208 - -1.1
660,208 - -0.5
660,208 - -0.4
660,399 + OH686_03155 0.24 -0.9
660,399 + OH686_03155 0.24 -0.0
660,399 + OH686_03155 0.24 -1.9
660,400 - OH686_03155 0.24 -0.5
660,400 - OH686_03155 0.24 -0.6
660,400 - OH686_03155 0.24 -0.9
660,483 + OH686_03155 0.32 +0.6
660,483 + OH686_03155 0.32 -0.4
660,483 + OH686_03155 0.32 -0.4
660,483 + OH686_03155 0.32 -0.1
660,483 + OH686_03155 0.32 -0.5
660,483 + OH686_03155 0.32 +1.2
660,483 + OH686_03155 0.32 -3.0
660,483 + OH686_03155 0.32 -1.4
660,483 + OH686_03155 0.32 +0.2
660,483 + OH686_03155 0.32 -0.1
660,483 + OH686_03155 0.32 -0.1
660,483 + OH686_03155 0.32 -0.1
660,483 + OH686_03155 0.32 -0.4
660,483 + OH686_03155 0.32 +1.0
660,483 + OH686_03155 0.32 -3.4
660,483 + OH686_03155 0.32 +1.1
660,483 + OH686_03155 0.32 +0.2
660,483 + OH686_03155 0.32 +1.0
660,483 + OH686_03155 0.32 +0.1
660,484 - OH686_03155 0.32 -0.8
660,484 - OH686_03155 0.32 -0.1
660,484 - OH686_03155 0.32 -0.2
660,484 - OH686_03155 0.32 -0.0
660,484 - OH686_03155 0.32 -0.1
661,435 + OH686_03160 0.29 +2.0
661,436 - OH686_03160 0.29 +0.2
661,436 - OH686_03160 0.29 +0.1
661,436 - OH686_03160 0.29 +0.6
661,436 - OH686_03160 0.29 -0.3
661,471 + OH686_03160 0.33 -0.4
661,471 + OH686_03160 0.33 -0.4
661,472 - OH686_03160 0.33 +0.6
661,472 - OH686_03160 0.33 +0.6
661,472 - OH686_03160 0.33 -0.1
661,573 + OH686_03160 0.44 +0.4
661,573 + OH686_03160 0.44 +0.2
661,573 + OH686_03160 0.44 -0.9
661,573 + OH686_03160 0.44 -1.0
661,574 - OH686_03160 0.44 -0.6
661,574 - OH686_03160 0.44 +0.6
661,574 - OH686_03160 0.44 +0.6
661,574 - OH686_03160 0.44 +1.6
661,630 + OH686_03160 0.50 +1.0
661,630 + OH686_03160 0.50 +0.1
661,631 - OH686_03160 0.50 -0.7
661,653 + OH686_03160 0.52 -2.4
661,653 + OH686_03160 0.52 +0.8
661,653 + OH686_03160 0.52 +0.5
661,653 + OH686_03160 0.52 -0.9
661,653 + OH686_03160 0.52 +0.6
661,654 - OH686_03160 0.52 -0.4
661,654 - OH686_03160 0.52 +0.2
661,990 + OH686_03160 0.87 -1.2
661,990 + OH686_03160 0.87 +0.2
661,990 + OH686_03160 0.87 -0.0
661,990 + OH686_03160 0.87 +0.6
661,991 - OH686_03160 0.88 -0.2
662,077 - +0.7
662,077 - -0.9
662,126 - -0.1
662,126 - -0.2
662,126 - +0.7
662,126 - +0.3
662,126 - -0.8
662,126 - +0.0
662,138 + +0.6
662,139 - -0.2
662,139 - -0.5
662,140 + +1.0
662,140 + -0.1
662,140 + -0.6
662,149 + -0.2
662,155 + -1.9
662,156 + -0.0
662,156 + -1.2
662,156 + +1.3
662,156 + +0.1
662,156 + +0.0
662,156 + -0.4
662,156 + -0.3
662,157 - -0.3
662,157 - +0.0
662,157 - -0.4
662,157 - +0.1
662,157 - -0.5
662,157 - +1.8
662,157 - -0.6
662,157 - +0.8
662,176 + -0.2
662,177 - -0.7
662,212 + -0.3
662,212 + -1.3
662,212 + +0.1
662,212 + +0.5
662,212 + -0.4
662,212 + -0.0
662,212 + -0.4
662,212 + +0.5
662,213 - +0.9
662,213 - +0.6
662,213 - -0.0
662,213 - +1.2
662,213 - -0.0
662,213 - -0.6
662,213 - -0.4
662,275 + OH686_03165 0.11 -0.0
662,275 + OH686_03165 0.11 -0.1
662,323 + OH686_03165 0.18 +0.5
662,323 + OH686_03165 0.18 -0.7
662,323 + OH686_03165 0.18 -0.7
662,323 + OH686_03165 0.18 +1.6
662,324 - OH686_03165 0.18 -0.7
662,324 - OH686_03165 0.18 -0.8
662,324 - OH686_03165 0.18 -0.2
662,324 - OH686_03165 0.18 -0.3
662,468 - OH686_03165 0.39 +1.0
662,468 - OH686_03165 0.39 -0.4
662,468 - OH686_03165 0.39 -1.0
662,480 + OH686_03165 0.40 -0.2
662,481 - OH686_03165 0.41 -0.7
662,542 + OH686_03165 0.49 +0.0
662,542 + OH686_03165 0.49 +0.3
662,542 + OH686_03165 0.49 -0.5
662,543 - OH686_03165 0.49 -0.5
662,543 - OH686_03165 0.49 +0.7
662,543 - OH686_03165 0.49 +0.5
662,543 - OH686_03165 0.49 -0.2
662,543 - OH686_03165 0.49 -1.7
662,689 + OH686_03165 0.70 -0.8
662,690 - OH686_03165 0.70 +0.4
662,690 - OH686_03165 0.70 +0.3
662,690 - OH686_03165 0.70 +0.1
662,690 - OH686_03165 0.70 -0.2
662,690 - OH686_03165 0.70 -2.1
662,690 - OH686_03165 0.70 -0.3
662,690 - OH686_03165 0.70 -0.1
662,719 + OH686_03165 0.74 -0.7
662,720 - OH686_03165 0.74 +0.2
662,767 + OH686_03165 0.81 -0.3
662,768 - OH686_03165 0.81 -1.5
662,768 - OH686_03165 0.81 +0.1
662,768 - OH686_03165 0.81 +0.8
662,803 + OH686_03165 0.86 -0.6
662,803 + OH686_03165 0.86 -1.4
662,803 + OH686_03165 0.86 +0.1
662,804 - OH686_03165 0.86 +0.1
662,836 + +0.1
662,836 + +0.6
662,836 + -1.3
662,836 + -0.3
662,836 + +1.0
662,836 + -0.3
662,837 - +0.4
662,837 - -0.4
662,837 - -0.1
662,837 - -0.5
662,837 - -1.7
662,837 - +0.3
662,859 + +0.3
662,859 + -0.2
662,859 + -0.5
662,860 - -0.3
662,860 - -0.4
662,899 + -0.4
662,899 + -0.9
662,899 + -0.2
662,900 - -0.1
662,900 - -1.2
663,069 + +0.5
663,070 - +0.2

Or see this region's nucleotide sequence