Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OH686_00905 and OH686_00910 are separated by 147 nucleotides OH686_00910 and OH686_00915 are separated by 148 nucleotides OH686_00915 and OH686_00920 are separated by 161 nucleotides
OH686_00905: OH686_00905 - exodeoxyribonuclease III, at 180,996 to 181,808
_00905
OH686_00910: OH686_00910 - ase-related protein, at 181,956 to 182,597
_00910
OH686_00915: OH686_00915 - Thiol peroxidase, Tpx-type , at 182,746 to 183,246
_00915
OH686_00920: OH686_00920 - Multidrug efflux system MdtABC-TolC, membrane fusion component MdtA, at 183,408 to 184,610
_00920
Position (kb) 182
183
184 Strain fitness (log2 ratio) -2
-1
0
1 at 181.787 kb on + strand at 181.787 kb on + strand at 181.787 kb on + strand at 181.788 kb on - strand at 181.788 kb on - strand at 181.788 kb on - strand at 181.788 kb on - strand at 181.840 kb on + strand at 181.893 kb on + strand at 181.894 kb on - strand at 181.894 kb on - strand at 181.921 kb on + strand at 181.921 kb on + strand at 181.921 kb on + strand at 181.921 kb on + strand at 181.921 kb on + strand at 181.921 kb on + strand at 181.921 kb on + strand at 181.922 kb on - strand at 181.922 kb on - strand at 181.922 kb on - strand at 181.922 kb on - strand at 181.922 kb on - strand at 181.922 kb on - strand at 181.998 kb on + strand at 181.998 kb on + strand at 181.998 kb on + strand at 181.999 kb on - strand at 181.999 kb on - strand at 181.999 kb on - strand at 182.025 kb on + strand, within OH686_00910 at 182.025 kb on + strand, within OH686_00910 at 182.026 kb on - strand, within OH686_00910 at 182.034 kb on + strand, within OH686_00910 at 182.058 kb on + strand, within OH686_00910 at 182.059 kb on - strand, within OH686_00910 at 182.059 kb on - strand, within OH686_00910 at 182.122 kb on + strand, within OH686_00910 at 182.123 kb on - strand, within OH686_00910 at 182.123 kb on - strand, within OH686_00910 at 182.123 kb on - strand, within OH686_00910 at 182.123 kb on - strand, within OH686_00910 at 182.248 kb on + strand, within OH686_00910 at 182.248 kb on + strand, within OH686_00910 at 182.248 kb on + strand, within OH686_00910 at 182.249 kb on - strand, within OH686_00910 at 182.249 kb on - strand, within OH686_00910 at 182.290 kb on - strand, within OH686_00910 at 182.298 kb on + strand, within OH686_00910 at 182.479 kb on - strand, within OH686_00910 at 182.479 kb on - strand, within OH686_00910 at 182.490 kb on + strand, within OH686_00910 at 182.490 kb on + strand, within OH686_00910 at 182.490 kb on + strand, within OH686_00910 at 182.491 kb on - strand, within OH686_00910 at 182.491 kb on - strand, within OH686_00910 at 182.491 kb on - strand, within OH686_00910 at 182.491 kb on - strand, within OH686_00910 at 182.491 kb on - strand, within OH686_00910 at 182.551 kb on + strand at 182.551 kb on + strand at 182.551 kb on + strand at 182.551 kb on + strand at 182.551 kb on + strand at 182.551 kb on + strand at 182.551 kb on + strand at 182.551 kb on + strand at 182.551 kb on + strand at 182.551 kb on + strand at 182.551 kb on + strand at 182.551 kb on + strand at 182.551 kb on + strand at 182.551 kb on + strand at 182.551 kb on + strand at 182.551 kb on + strand at 182.551 kb on + strand at 182.551 kb on + strand at 182.551 kb on + strand at 182.551 kb on + strand at 182.552 kb on - strand at 182.552 kb on - strand at 182.552 kb on - strand at 182.552 kb on - strand at 182.552 kb on - strand at 182.552 kb on - strand at 182.552 kb on - strand at 182.552 kb on - strand at 182.552 kb on - strand at 182.552 kb on - strand at 182.552 kb on - strand at 182.552 kb on - strand at 182.552 kb on - strand at 182.552 kb on - strand at 182.552 kb on - strand at 182.552 kb on - strand at 182.552 kb on - strand at 182.552 kb on - strand at 182.552 kb on - strand at 182.552 kb on - strand at 182.652 kb on + strand at 182.652 kb on + strand at 182.652 kb on + strand at 182.652 kb on + strand at 182.652 kb on + strand at 182.652 kb on + strand at 182.652 kb on + strand at 182.652 kb on + strand at 182.652 kb on + strand at 182.662 kb on - strand at 182.662 kb on - strand at 182.662 kb on - strand at 182.662 kb on - strand at 182.662 kb on - strand at 182.692 kb on - strand at 182.702 kb on + strand at 182.702 kb on + strand at 182.703 kb on - strand at 182.703 kb on - strand at 182.711 kb on - strand at 182.717 kb on + strand at 182.717 kb on + strand at 182.717 kb on + strand at 182.717 kb on + strand at 182.717 kb on + strand at 182.717 kb on + strand at 182.717 kb on + strand at 182.717 kb on + strand at 182.717 kb on + strand at 182.718 kb on - strand at 182.718 kb on - strand at 182.718 kb on - strand at 182.718 kb on - strand at 182.718 kb on - strand at 182.718 kb on - strand at 182.718 kb on - strand at 182.718 kb on - strand at 182.718 kb on - strand at 182.718 kb on - strand at 182.718 kb on - strand at 182.718 kb on - strand at 182.718 kb on - strand at 182.718 kb on - strand at 182.721 kb on + strand at 182.721 kb on + strand at 182.721 kb on + strand at 182.721 kb on + strand at 182.721 kb on + strand at 182.721 kb on + strand at 182.721 kb on + strand at 182.721 kb on + strand at 182.721 kb on + strand at 182.721 kb on + strand at 182.721 kb on + strand at 182.721 kb on + strand at 182.721 kb on + strand at 182.721 kb on + strand at 182.722 kb on - strand at 182.722 kb on - strand at 182.722 kb on - strand at 182.722 kb on - strand at 182.756 kb on + strand at 182.756 kb on + strand at 182.756 kb on + strand at 182.757 kb on - strand at 182.757 kb on - strand at 182.757 kb on - strand at 182.888 kb on + strand, within OH686_00915 at 182.888 kb on + strand, within OH686_00915 at 182.888 kb on + strand, within OH686_00915 at 182.888 kb on + strand, within OH686_00915 at 182.888 kb on + strand, within OH686_00915 at 182.889 kb on - strand, within OH686_00915 at 182.889 kb on - strand, within OH686_00915 at 182.889 kb on - strand, within OH686_00915 at 182.889 kb on - strand, within OH686_00915 at 183.217 kb on + strand at 183.217 kb on + strand at 183.218 kb on - strand at 183.244 kb on + strand at 183.244 kb on + strand at 183.244 kb on + strand at 183.244 kb on + strand at 183.244 kb on + strand at 183.244 kb on + strand at 183.244 kb on + strand at 183.245 kb on - strand at 183.245 kb on - strand at 183.245 kb on - strand at 183.256 kb on - strand at 183.296 kb on + strand at 183.315 kb on + strand at 183.315 kb on + strand at 183.321 kb on + strand at 183.321 kb on + strand at 183.322 kb on - strand at 183.322 kb on - strand at 183.342 kb on - strand at 183.369 kb on + strand at 183.370 kb on - strand at 183.373 kb on + strand at 183.373 kb on + strand at 183.373 kb on + strand at 183.373 kb on + strand at 183.373 kb on + strand at 183.373 kb on + strand at 183.373 kb on + strand at 183.373 kb on + strand at 183.374 kb on - strand at 183.374 kb on - strand at 183.374 kb on - strand at 183.374 kb on - strand at 183.374 kb on - strand at 183.374 kb on - strand at 183.394 kb on + strand at 183.395 kb on - strand at 183.466 kb on + strand at 183.466 kb on + strand at 183.467 kb on - strand at 183.742 kb on - strand, within OH686_00920 at 183.825 kb on + strand, within OH686_00920 at 183.826 kb on - strand, within OH686_00920 at 183.838 kb on - strand, within OH686_00920 at 183.838 kb on - strand, within OH686_00920 at 183.838 kb on - strand, within OH686_00920 at 183.898 kb on - strand, within OH686_00920 at 183.898 kb on - strand, within OH686_00920 at 184.028 kb on + strand, within OH686_00920 at 184.028 kb on + strand, within OH686_00920 at 184.028 kb on + strand, within OH686_00920
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 181,787 + +1.0 181,787 + -1.0 181,787 + -1.0 181,788 - +0.6 181,788 - +0.3 181,788 - -2.3 181,788 - +0.3 181,840 + +0.4 181,893 + +0.5 181,894 - -0.1 181,894 - +0.9 181,921 + +0.5 181,921 + -0.3 181,921 + -1.3 181,921 + -0.6 181,921 + -0.9 181,921 + +0.6 181,921 + +1.2 181,922 - -0.3 181,922 - -1.1 181,922 - -1.0 181,922 - -0.4 181,922 - -2.2 181,922 - +1.0 181,998 + +0.4 181,998 + -0.3 181,998 + -0.9 181,999 - -0.0 181,999 - -0.2 181,999 - -0.2 182,025 + OH686_00910 0.11 -1.2 182,025 + OH686_00910 0.11 +0.0 182,026 - OH686_00910 0.11 -0.2 182,034 + OH686_00910 0.12 -0.3 182,058 + OH686_00910 0.16 -0.1 182,059 - OH686_00910 0.16 -1.4 182,059 - OH686_00910 0.16 -0.6 182,122 + OH686_00910 0.26 -1.9 182,123 - OH686_00910 0.26 -1.3 182,123 - OH686_00910 0.26 +0.0 182,123 - OH686_00910 0.26 +0.5 182,123 - OH686_00910 0.26 -0.1 182,248 + OH686_00910 0.45 -0.7 182,248 + OH686_00910 0.45 -0.3 182,248 + OH686_00910 0.45 +0.2 182,249 - OH686_00910 0.46 -1.0 182,249 - OH686_00910 0.46 -0.2 182,290 - OH686_00910 0.52 +0.7 182,298 + OH686_00910 0.53 +0.3 182,479 - OH686_00910 0.81 -0.3 182,479 - OH686_00910 0.81 -0.5 182,490 + OH686_00910 0.83 +0.2 182,490 + OH686_00910 0.83 -0.1 182,490 + OH686_00910 0.83 +0.5 182,491 - OH686_00910 0.83 +0.0 182,491 - OH686_00910 0.83 -0.1 182,491 - OH686_00910 0.83 +0.1 182,491 - OH686_00910 0.83 -0.1 182,491 - OH686_00910 0.83 -2.5 182,551 + +0.0 182,551 + +0.2 182,551 + +0.8 182,551 + +1.5 182,551 + -0.6 182,551 + +0.0 182,551 + +1.3 182,551 + +0.8 182,551 + -1.1 182,551 + +0.2 182,551 + +0.4 182,551 + -0.9 182,551 + +0.3 182,551 + -0.4 182,551 + -0.3 182,551 + -1.3 182,551 + -1.4 182,551 + -0.2 182,551 + +0.7 182,551 + +0.5 182,552 - -0.9 182,552 - +0.2 182,552 - +0.2 182,552 - +0.2 182,552 - +0.0 182,552 - -0.3 182,552 - +0.1 182,552 - +0.1 182,552 - -1.5 182,552 - +0.9 182,552 - -0.2 182,552 - -1.8 182,552 - +0.3 182,552 - -0.7 182,552 - -0.1 182,552 - -0.2 182,552 - -0.5 182,552 - -0.7 182,552 - -0.3 182,552 - +0.0 182,652 + -1.6 182,652 + -0.3 182,652 + -1.9 182,652 + +0.9 182,652 + -0.3 182,652 + -0.1 182,652 + -1.1 182,652 + +0.0 182,652 + -0.7 182,662 - -0.4 182,662 - +0.4 182,662 - +0.0 182,662 - +0.2 182,662 - +0.4 182,692 - +0.2 182,702 + +0.2 182,702 + +0.1 182,703 - +0.4 182,703 - -0.3 182,711 - +0.3 182,717 + +0.4 182,717 + -0.7 182,717 + -0.1 182,717 + -0.0 182,717 + +0.6 182,717 + +1.0 182,717 + +0.9 182,717 + -0.2 182,717 + -1.4 182,718 - -0.8 182,718 - -0.2 182,718 - +1.5 182,718 - -0.1 182,718 - -0.6 182,718 - -0.3 182,718 - -0.1 182,718 - -0.0 182,718 - -0.8 182,718 - +0.1 182,718 - +0.2 182,718 - +1.4 182,718 - -0.1 182,718 - +0.6 182,721 + +0.3 182,721 + +1.0 182,721 + -0.3 182,721 + -0.2 182,721 + -0.8 182,721 + -0.7 182,721 + +0.2 182,721 + -1.0 182,721 + -0.3 182,721 + +0.2 182,721 + +0.4 182,721 + -0.4 182,721 + +0.4 182,721 + +0.9 182,722 - -0.5 182,722 - -0.4 182,722 - +0.6 182,722 - +0.3 182,756 + +0.6 182,756 + +0.1 182,756 + -0.1 182,757 - -0.5 182,757 - -1.3 182,757 - +0.1 182,888 + OH686_00915 0.28 +1.7 182,888 + OH686_00915 0.28 +0.6 182,888 + OH686_00915 0.28 -0.7 182,888 + OH686_00915 0.28 +0.8 182,888 + OH686_00915 0.28 +1.0 182,889 - OH686_00915 0.29 +0.1 182,889 - OH686_00915 0.29 +1.1 182,889 - OH686_00915 0.29 -1.3 182,889 - OH686_00915 0.29 +0.4 183,217 + +0.2 183,217 + +1.4 183,218 - +0.3 183,244 + -1.9 183,244 + +0.2 183,244 + +0.3 183,244 + +0.3 183,244 + -1.7 183,244 + -1.0 183,244 + -0.3 183,245 - -0.0 183,245 - -1.1 183,245 - -0.7 183,256 - +0.5 183,296 + -0.3 183,315 + -0.8 183,315 + -0.2 183,321 + -0.3 183,321 + +0.6 183,322 - -0.7 183,322 - -0.6 183,342 - +0.0 183,369 + +0.9 183,370 - +0.1 183,373 + -1.1 183,373 + +0.0 183,373 + -0.3 183,373 + -2.1 183,373 + +0.7 183,373 + +0.7 183,373 + +0.6 183,373 + +0.6 183,374 - +1.5 183,374 - +0.8 183,374 - +0.0 183,374 - +0.0 183,374 - -0.8 183,374 - -0.7 183,394 + -0.9 183,395 - +0.3 183,466 + +0.5 183,466 + -0.2 183,467 - +0.5 183,742 - OH686_00920 0.28 +0.3 183,825 + OH686_00920 0.35 -0.3 183,826 - OH686_00920 0.35 +0.0 183,838 - OH686_00920 0.36 +0.0 183,838 - OH686_00920 0.36 -0.8 183,838 - OH686_00920 0.36 +0.6 183,898 - OH686_00920 0.41 -0.3 183,898 - OH686_00920 0.41 -0.4 184,028 + OH686_00920 0.52 -0.8 184,028 + OH686_00920 0.52 +0.4 184,028 + OH686_00920 0.52 +0.1
Or see this region's nucleotide sequence