Experiment: m.b. perchlorate 25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2622 and Echvi_2623 overlap by 4 nucleotides Echvi_2623 and Echvi_2624 are separated by 233 nucleotides Echvi_2624 and Echvi_2625 are separated by 11 nucleotides
Echvi_2622: Echvi_2622 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 3,109,862 to 3,110,557
_2622
Echvi_2623: Echvi_2623 - Signal transduction histidine kinase, at 3,110,554 to 3,112,011
_2623
Echvi_2624: Echvi_2624 - hypothetical protein, at 3,112,245 to 3,112,748
_2624
Echvi_2625: Echvi_2625 - hypothetical protein, at 3,112,760 to 3,113,227
_2625
Position (kb)
3110
3111
3112
3113 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3109.569 kb on + strand at 3109.606 kb on + strand at 3109.606 kb on + strand at 3109.610 kb on + strand at 3109.611 kb on - strand at 3109.611 kb on - strand at 3109.611 kb on - strand at 3109.611 kb on - strand at 3109.611 kb on - strand at 3109.617 kb on - strand at 3109.617 kb on - strand at 3109.617 kb on - strand at 3109.662 kb on + strand at 3109.690 kb on + strand at 3109.691 kb on - strand at 3109.691 kb on - strand at 3109.691 kb on - strand at 3109.691 kb on - strand at 3109.692 kb on + strand at 3109.753 kb on - strand at 3109.753 kb on - strand at 3109.756 kb on - strand at 3109.759 kb on - strand at 3109.763 kb on + strand at 3109.763 kb on + strand at 3109.764 kb on - strand at 3109.764 kb on - strand at 3109.769 kb on - strand at 3109.839 kb on + strand at 3109.839 kb on + strand at 3109.839 kb on + strand at 3109.841 kb on + strand at 3109.843 kb on + strand at 3109.872 kb on + strand at 3109.997 kb on + strand, within Echvi_2622 at 3109.997 kb on + strand, within Echvi_2622 at 3110.017 kb on + strand, within Echvi_2622 at 3110.053 kb on + strand, within Echvi_2622 at 3110.054 kb on - strand, within Echvi_2622 at 3110.074 kb on + strand, within Echvi_2622 at 3110.074 kb on + strand, within Echvi_2622 at 3110.074 kb on + strand, within Echvi_2622 at 3110.074 kb on + strand, within Echvi_2622 at 3110.074 kb on + strand, within Echvi_2622 at 3110.074 kb on + strand, within Echvi_2622 at 3110.075 kb on - strand, within Echvi_2622 at 3110.075 kb on - strand, within Echvi_2622 at 3110.075 kb on - strand, within Echvi_2622 at 3110.075 kb on - strand, within Echvi_2622 at 3110.075 kb on - strand, within Echvi_2622 at 3110.075 kb on - strand, within Echvi_2622 at 3110.075 kb on - strand at 3110.083 kb on - strand, within Echvi_2622 at 3110.173 kb on + strand, within Echvi_2622 at 3110.225 kb on + strand, within Echvi_2622 at 3110.225 kb on + strand, within Echvi_2622 at 3110.225 kb on + strand, within Echvi_2622 at 3110.226 kb on - strand, within Echvi_2622 at 3110.226 kb on - strand, within Echvi_2622 at 3110.226 kb on - strand, within Echvi_2622 at 3110.226 kb on - strand, within Echvi_2622 at 3110.258 kb on - strand, within Echvi_2622 at 3110.258 kb on - strand, within Echvi_2622 at 3110.258 kb on - strand, within Echvi_2622 at 3110.258 kb on - strand, within Echvi_2622 at 3110.262 kb on - strand, within Echvi_2622 at 3110.459 kb on + strand, within Echvi_2622 at 3110.459 kb on + strand, within Echvi_2622 at 3110.460 kb on - strand, within Echvi_2622 at 3110.464 kb on - strand, within Echvi_2622 at 3110.464 kb on - strand at 3110.493 kb on - strand at 3110.541 kb on + strand at 3110.578 kb on + strand at 3110.578 kb on + strand at 3110.606 kb on - strand at 3110.608 kb on - strand at 3110.608 kb on - strand at 3110.628 kb on + strand at 3110.629 kb on - strand at 3110.633 kb on - strand at 3110.694 kb on + strand at 3110.694 kb on + strand at 3110.695 kb on - strand at 3110.736 kb on + strand, within Echvi_2623 at 3110.737 kb on - strand, within Echvi_2623 at 3110.751 kb on - strand, within Echvi_2623 at 3110.761 kb on + strand, within Echvi_2623 at 3110.791 kb on - strand, within Echvi_2623 at 3110.797 kb on + strand, within Echvi_2623 at 3110.799 kb on + strand, within Echvi_2623 at 3110.832 kb on - strand, within Echvi_2623 at 3110.892 kb on + strand, within Echvi_2623 at 3110.896 kb on + strand, within Echvi_2623 at 3110.896 kb on + strand, within Echvi_2623 at 3110.896 kb on + strand, within Echvi_2623 at 3110.896 kb on + strand, within Echvi_2623 at 3110.896 kb on + strand, within Echvi_2623 at 3110.896 kb on + strand, within Echvi_2623 at 3110.897 kb on - strand, within Echvi_2623 at 3110.897 kb on - strand, within Echvi_2623 at 3110.956 kb on + strand, within Echvi_2623 at 3110.957 kb on - strand, within Echvi_2623 at 3110.988 kb on + strand, within Echvi_2623 at 3111.089 kb on - strand, within Echvi_2623 at 3111.122 kb on + strand, within Echvi_2623 at 3111.183 kb on + strand, within Echvi_2623 at 3111.183 kb on + strand, within Echvi_2623 at 3111.184 kb on - strand, within Echvi_2623 at 3111.184 kb on - strand, within Echvi_2623 at 3111.184 kb on - strand, within Echvi_2623 at 3111.197 kb on + strand, within Echvi_2623 at 3111.261 kb on + strand, within Echvi_2623 at 3111.355 kb on + strand, within Echvi_2623 at 3111.355 kb on + strand, within Echvi_2623 at 3111.356 kb on - strand, within Echvi_2623 at 3111.356 kb on - strand, within Echvi_2623 at 3111.356 kb on - strand, within Echvi_2623 at 3111.541 kb on - strand, within Echvi_2623 at 3111.541 kb on - strand, within Echvi_2623 at 3111.628 kb on - strand, within Echvi_2623 at 3111.628 kb on - strand, within Echvi_2623 at 3111.761 kb on - strand, within Echvi_2623 at 3111.761 kb on - strand, within Echvi_2623 at 3111.874 kb on - strand at 3111.963 kb on - strand at 3111.970 kb on + strand at 3111.984 kb on + strand at 3112.003 kb on - strand at 3112.003 kb on - strand at 3112.023 kb on + strand at 3112.028 kb on + strand at 3112.029 kb on - strand at 3112.029 kb on - strand at 3112.029 kb on - strand at 3112.029 kb on - strand at 3112.032 kb on - strand at 3112.054 kb on - strand at 3112.074 kb on + strand at 3112.078 kb on + strand at 3112.079 kb on - strand at 3112.079 kb on - strand at 3112.080 kb on + strand at 3112.081 kb on - strand at 3112.081 kb on - strand at 3112.119 kb on + strand at 3112.120 kb on - strand at 3112.120 kb on - strand at 3112.121 kb on + strand at 3112.121 kb on + strand at 3112.122 kb on - strand at 3112.122 kb on - strand at 3112.122 kb on - strand at 3112.123 kb on + strand at 3112.124 kb on - strand at 3112.163 kb on + strand at 3112.164 kb on - strand at 3112.174 kb on + strand at 3112.175 kb on - strand at 3112.243 kb on - strand at 3112.262 kb on - strand at 3112.262 kb on - strand at 3112.262 kb on - strand at 3112.262 kb on - strand at 3112.265 kb on - strand at 3112.363 kb on - strand, within Echvi_2624 at 3112.415 kb on + strand, within Echvi_2624 at 3112.459 kb on + strand, within Echvi_2624 at 3112.459 kb on + strand, within Echvi_2624 at 3112.471 kb on - strand, within Echvi_2624 at 3112.517 kb on + strand, within Echvi_2624 at 3112.540 kb on - strand, within Echvi_2624 at 3112.559 kb on - strand, within Echvi_2624 at 3112.559 kb on - strand, within Echvi_2624 at 3112.751 kb on - strand at 3112.778 kb on + strand at 3112.778 kb on + strand at 3112.779 kb on - strand at 3112.779 kb on - strand at 3112.918 kb on - strand, within Echvi_2625 at 3112.948 kb on + strand, within Echvi_2625 at 3112.949 kb on - strand, within Echvi_2625 at 3112.949 kb on - strand, within Echvi_2625 at 3112.949 kb on - strand, within Echvi_2625 at 3112.949 kb on - strand, within Echvi_2625
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 25 mM remove 3,109,569 + -1.0 3,109,606 + +0.3 3,109,606 + +1.1 3,109,610 + -0.9 3,109,611 - +0.0 3,109,611 - +0.0 3,109,611 - +1.2 3,109,611 - +2.5 3,109,611 - +1.5 3,109,617 - +1.2 3,109,617 - +0.5 3,109,617 - -0.4 3,109,662 + -0.0 3,109,690 + -0.4 3,109,691 - +0.4 3,109,691 - -0.6 3,109,691 - +0.4 3,109,691 - -0.4 3,109,692 + +0.4 3,109,753 - -0.2 3,109,753 - +1.1 3,109,756 - +1.1 3,109,759 - -0.1 3,109,763 + +0.5 3,109,763 + +0.1 3,109,764 - -0.3 3,109,764 - -1.1 3,109,769 - -0.2 3,109,839 + -0.2 3,109,839 + +0.5 3,109,839 + +0.1 3,109,841 + -1.2 3,109,843 + -1.2 3,109,872 + +0.2 3,109,997 + Echvi_2622 0.19 -0.5 3,109,997 + Echvi_2622 0.19 -0.7 3,110,017 + Echvi_2622 0.22 -0.3 3,110,053 + Echvi_2622 0.27 -1.7 3,110,054 - Echvi_2622 0.28 -0.1 3,110,074 + Echvi_2622 0.30 -0.7 3,110,074 + Echvi_2622 0.30 -0.9 3,110,074 + Echvi_2622 0.30 -0.3 3,110,074 + Echvi_2622 0.30 -0.1 3,110,074 + Echvi_2622 0.30 -0.3 3,110,074 + Echvi_2622 0.30 -1.2 3,110,075 - Echvi_2622 0.31 -0.5 3,110,075 - Echvi_2622 0.31 +0.2 3,110,075 - Echvi_2622 0.31 -0.2 3,110,075 - Echvi_2622 0.31 +0.2 3,110,075 - Echvi_2622 0.31 -0.9 3,110,075 - Echvi_2622 0.31 -0.4 3,110,075 - +1.5 3,110,083 - Echvi_2622 0.32 +0.8 3,110,173 + Echvi_2622 0.45 +0.9 3,110,225 + Echvi_2622 0.52 -0.0 3,110,225 + Echvi_2622 0.52 +0.9 3,110,225 + Echvi_2622 0.52 -0.8 3,110,226 - Echvi_2622 0.52 -0.6 3,110,226 - Echvi_2622 0.52 +2.0 3,110,226 - Echvi_2622 0.52 -0.8 3,110,226 - Echvi_2622 0.52 +0.1 3,110,258 - Echvi_2622 0.57 -0.8 3,110,258 - Echvi_2622 0.57 -1.4 3,110,258 - Echvi_2622 0.57 -1.1 3,110,258 - Echvi_2622 0.57 -2.1 3,110,262 - Echvi_2622 0.57 +0.0 3,110,459 + Echvi_2622 0.86 -2.0 3,110,459 + Echvi_2622 0.86 -0.1 3,110,460 - Echvi_2622 0.86 -0.7 3,110,464 - Echvi_2622 0.86 -0.7 3,110,464 - +1.5 3,110,493 - -0.8 3,110,541 + -0.8 3,110,578 + -0.6 3,110,578 + -0.7 3,110,606 - -0.5 3,110,608 - -0.5 3,110,608 - +0.4 3,110,628 + +0.2 3,110,629 - +0.4 3,110,633 - +0.4 3,110,694 + -0.0 3,110,694 + +0.1 3,110,695 - +0.6 3,110,736 + Echvi_2623 0.12 -0.9 3,110,737 - Echvi_2623 0.13 -1.8 3,110,751 - Echvi_2623 0.14 -1.0 3,110,761 + Echvi_2623 0.14 -1.5 3,110,791 - Echvi_2623 0.16 +0.3 3,110,797 + Echvi_2623 0.17 -1.1 3,110,799 + Echvi_2623 0.17 -0.1 3,110,832 - Echvi_2623 0.19 -1.5 3,110,892 + Echvi_2623 0.23 -1.0 3,110,896 + Echvi_2623 0.23 -0.4 3,110,896 + Echvi_2623 0.23 +0.5 3,110,896 + Echvi_2623 0.23 -0.0 3,110,896 + Echvi_2623 0.23 -1.0 3,110,896 + Echvi_2623 0.23 -1.1 3,110,896 + Echvi_2623 0.23 +0.1 3,110,897 - Echvi_2623 0.24 -1.2 3,110,897 - Echvi_2623 0.24 -0.4 3,110,956 + Echvi_2623 0.28 +0.6 3,110,957 - Echvi_2623 0.28 -0.6 3,110,988 + Echvi_2623 0.30 +0.4 3,111,089 - Echvi_2623 0.37 +0.1 3,111,122 + Echvi_2623 0.39 -0.3 3,111,183 + Echvi_2623 0.43 -1.7 3,111,183 + Echvi_2623 0.43 -0.9 3,111,184 - Echvi_2623 0.43 +0.2 3,111,184 - Echvi_2623 0.43 -0.0 3,111,184 - Echvi_2623 0.43 -0.2 3,111,197 + Echvi_2623 0.44 +0.1 3,111,261 + Echvi_2623 0.48 -1.4 3,111,355 + Echvi_2623 0.55 +0.5 3,111,355 + Echvi_2623 0.55 +0.5 3,111,356 - Echvi_2623 0.55 -1.1 3,111,356 - Echvi_2623 0.55 +0.0 3,111,356 - Echvi_2623 0.55 -0.5 3,111,541 - Echvi_2623 0.68 +1.3 3,111,541 - Echvi_2623 0.68 -1.0 3,111,628 - Echvi_2623 0.74 -0.1 3,111,628 - Echvi_2623 0.74 -0.1 3,111,761 - Echvi_2623 0.83 -0.3 3,111,761 - Echvi_2623 0.83 -0.1 3,111,874 - +0.8 3,111,963 - -0.9 3,111,970 + -0.7 3,111,984 + -0.4 3,112,003 - -0.3 3,112,003 - -0.7 3,112,023 + -0.6 3,112,028 + +0.5 3,112,029 - -0.5 3,112,029 - +1.7 3,112,029 - -0.2 3,112,029 - -1.6 3,112,032 - -0.1 3,112,054 - +0.1 3,112,074 + -1.0 3,112,078 + -0.3 3,112,079 - -0.3 3,112,079 - +1.2 3,112,080 + +0.8 3,112,081 - -0.4 3,112,081 - +0.7 3,112,119 + -1.0 3,112,120 - +0.9 3,112,120 - +0.6 3,112,121 + -0.7 3,112,121 + +0.8 3,112,122 - +0.6 3,112,122 - +1.9 3,112,122 - +1.4 3,112,123 + -0.6 3,112,124 - +0.9 3,112,163 + +1.5 3,112,164 - +0.4 3,112,174 + +0.9 3,112,175 - -1.5 3,112,243 - -0.0 3,112,262 - +0.2 3,112,262 - +1.2 3,112,262 - +0.1 3,112,262 - -0.5 3,112,265 - -0.0 3,112,363 - Echvi_2624 0.23 -1.7 3,112,415 + Echvi_2624 0.34 +0.3 3,112,459 + Echvi_2624 0.42 +1.1 3,112,459 + Echvi_2624 0.42 +0.8 3,112,471 - Echvi_2624 0.45 +0.3 3,112,517 + Echvi_2624 0.54 +0.1 3,112,540 - Echvi_2624 0.59 -0.5 3,112,559 - Echvi_2624 0.62 -0.1 3,112,559 - Echvi_2624 0.62 +0.1 3,112,751 - -0.9 3,112,778 + -1.3 3,112,778 + +0.3 3,112,779 - -0.3 3,112,779 - +0.2 3,112,918 - Echvi_2625 0.34 -0.4 3,112,948 + Echvi_2625 0.40 -2.0 3,112,949 - Echvi_2625 0.40 -0.6 3,112,949 - Echvi_2625 0.40 +0.3 3,112,949 - Echvi_2625 0.40 -0.6 3,112,949 - Echvi_2625 0.40 +0.0
Or see this region's nucleotide sequence