Experiment: m.b. perchlorate 25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0370 and Echvi_0371 are separated by 47 nucleotides Echvi_0371 and Echvi_0372 are separated by 166 nucleotides Echvi_0372 and Echvi_0373 are separated by 3 nucleotides Echvi_0373 and Echvi_0374 are separated by 12 nucleotides
Echvi_0370: Echvi_0370 - WbqC-like protein family., at 398,823 to 399,452
_0370
Echvi_0371: Echvi_0371 - Sua5/YciO/YrdC/YwlC family protein, at 399,500 to 400,129
_0371
Echvi_0372: Echvi_0372 - conserved hypothetical protein, YceG family, at 400,296 to 401,339
_0372
Echvi_0373: Echvi_0373 - acyl-CoA thioester hydrolase, YbgC/YbaW family, at 401,343 to 401,747
_0373
Echvi_0374: Echvi_0374 - Predicted membrane protein, at 401,760 to 402,704
_0374
Position (kb) 400
401
402 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 399.312 kb on + strand, within Echvi_0370 at 399.326 kb on + strand, within Echvi_0370 at 399.331 kb on + strand, within Echvi_0370 at 399.368 kb on + strand, within Echvi_0370 at 399.388 kb on - strand, within Echvi_0370 at 399.405 kb on + strand at 399.479 kb on + strand at 399.489 kb on + strand at 399.489 kb on + strand at 399.559 kb on + strand at 399.586 kb on + strand, within Echvi_0371 at 399.586 kb on + strand, within Echvi_0371 at 399.663 kb on + strand, within Echvi_0371 at 399.663 kb on + strand, within Echvi_0371 at 399.731 kb on + strand, within Echvi_0371 at 399.734 kb on - strand, within Echvi_0371 at 399.734 kb on - strand, within Echvi_0371 at 399.743 kb on - strand, within Echvi_0371 at 399.743 kb on - strand, within Echvi_0371 at 399.745 kb on + strand, within Echvi_0371 at 399.746 kb on - strand, within Echvi_0371 at 399.791 kb on + strand, within Echvi_0371 at 399.823 kb on + strand, within Echvi_0371 at 399.889 kb on + strand, within Echvi_0371 at 399.890 kb on - strand, within Echvi_0371 at 399.891 kb on + strand, within Echvi_0371 at 399.900 kb on - strand, within Echvi_0371 at 399.902 kb on - strand, within Echvi_0371 at 399.902 kb on - strand, within Echvi_0371 at 399.915 kb on + strand, within Echvi_0371 at 399.950 kb on + strand, within Echvi_0371 at 399.997 kb on + strand, within Echvi_0371 at 399.997 kb on + strand, within Echvi_0371 at 399.997 kb on + strand, within Echvi_0371 at 400.033 kb on - strand, within Echvi_0371 at 400.059 kb on - strand, within Echvi_0371 at 400.077 kb on - strand at 400.156 kb on + strand at 400.156 kb on + strand at 400.156 kb on + strand at 400.156 kb on + strand at 400.156 kb on + strand at 400.156 kb on + strand at 400.157 kb on - strand at 400.157 kb on - strand at 400.157 kb on - strand at 400.157 kb on - strand at 400.157 kb on - strand at 400.169 kb on - strand at 400.191 kb on + strand at 400.228 kb on + strand at 400.228 kb on + strand at 400.228 kb on + strand at 400.232 kb on + strand at 400.232 kb on + strand at 400.232 kb on + strand at 400.233 kb on - strand at 400.291 kb on + strand at 400.819 kb on - strand, within Echvi_0372 at 400.829 kb on + strand, within Echvi_0372 at 400.857 kb on + strand at 401.004 kb on + strand, within Echvi_0372 at 401.025 kb on - strand, within Echvi_0372 at 401.121 kb on + strand, within Echvi_0372 at 401.159 kb on + strand, within Echvi_0372 at 401.163 kb on - strand, within Echvi_0372 at 401.163 kb on - strand, within Echvi_0372 at 401.217 kb on + strand, within Echvi_0372 at 401.218 kb on - strand, within Echvi_0372 at 401.218 kb on - strand, within Echvi_0372 at 401.221 kb on + strand, within Echvi_0372 at 401.223 kb on + strand, within Echvi_0372 at 401.223 kb on + strand, within Echvi_0372 at 401.223 kb on + strand, within Echvi_0372 at 401.223 kb on + strand, within Echvi_0372 at 401.223 kb on + strand, within Echvi_0372 at 401.223 kb on + strand, within Echvi_0372 at 401.224 kb on - strand, within Echvi_0372 at 401.305 kb on - strand at 401.334 kb on + strand at 401.337 kb on + strand at 401.342 kb on + strand at 401.342 kb on + strand at 401.343 kb on - strand at 401.343 kb on - strand at 401.349 kb on - strand at 401.349 kb on - strand at 401.365 kb on + strand at 401.365 kb on + strand at 401.366 kb on - strand at 401.372 kb on - strand at 401.400 kb on + strand, within Echvi_0373 at 401.400 kb on + strand, within Echvi_0373 at 401.400 kb on + strand, within Echvi_0373 at 401.401 kb on - strand, within Echvi_0373 at 401.406 kb on + strand, within Echvi_0373 at 401.406 kb on + strand, within Echvi_0373 at 401.406 kb on + strand, within Echvi_0373 at 401.407 kb on - strand, within Echvi_0373 at 401.409 kb on + strand, within Echvi_0373 at 401.410 kb on - strand, within Echvi_0373 at 401.410 kb on - strand, within Echvi_0373 at 401.418 kb on + strand, within Echvi_0373 at 401.418 kb on + strand, within Echvi_0373 at 401.419 kb on - strand, within Echvi_0373 at 401.427 kb on + strand, within Echvi_0373 at 401.427 kb on + strand, within Echvi_0373 at 401.428 kb on - strand, within Echvi_0373 at 401.512 kb on + strand, within Echvi_0373 at 401.512 kb on + strand, within Echvi_0373 at 401.512 kb on + strand, within Echvi_0373 at 401.515 kb on + strand, within Echvi_0373 at 401.516 kb on - strand, within Echvi_0373 at 401.516 kb on - strand, within Echvi_0373 at 401.532 kb on + strand, within Echvi_0373 at 401.560 kb on + strand, within Echvi_0373 at 401.560 kb on + strand, within Echvi_0373 at 401.560 kb on + strand, within Echvi_0373 at 401.561 kb on - strand, within Echvi_0373 at 401.561 kb on - strand, within Echvi_0373 at 401.722 kb on + strand at 401.740 kb on - strand at 401.740 kb on - strand at 401.785 kb on + strand at 401.806 kb on - strand at 401.857 kb on - strand, within Echvi_0374 at 401.930 kb on + strand, within Echvi_0374 at 401.988 kb on - strand, within Echvi_0374 at 402.038 kb on - strand, within Echvi_0374 at 402.145 kb on + strand, within Echvi_0374 at 402.146 kb on - strand, within Echvi_0374 at 402.146 kb on - strand, within Echvi_0374 at 402.147 kb on + strand, within Echvi_0374 at 402.147 kb on + strand, within Echvi_0374 at 402.148 kb on - strand, within Echvi_0374 at 402.180 kb on - strand, within Echvi_0374 at 402.199 kb on - strand, within Echvi_0374 at 402.289 kb on + strand, within Echvi_0374 at 402.290 kb on - strand, within Echvi_0374 at 402.336 kb on + strand, within Echvi_0374 at 402.336 kb on + strand, within Echvi_0374
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. perchlorate 25 mM remove 399,312 + Echvi_0370 0.78 -1.2 399,326 + Echvi_0370 0.80 -0.4 399,331 + Echvi_0370 0.81 -0.3 399,368 + Echvi_0370 0.87 +0.3 399,388 - Echvi_0370 0.90 +0.7 399,405 + +2.1 399,479 + +0.2 399,489 + -0.2 399,489 + -0.3 399,559 + +0.0 399,586 + Echvi_0371 0.14 -0.9 399,586 + Echvi_0371 0.14 -0.2 399,663 + Echvi_0371 0.26 -0.9 399,663 + Echvi_0371 0.26 -0.9 399,731 + Echvi_0371 0.37 -0.7 399,734 - Echvi_0371 0.37 +1.4 399,734 - Echvi_0371 0.37 +1.5 399,743 - Echvi_0371 0.39 +0.9 399,743 - Echvi_0371 0.39 +0.9 399,745 + Echvi_0371 0.39 +0.7 399,746 - Echvi_0371 0.39 -0.4 399,791 + Echvi_0371 0.46 -0.4 399,823 + Echvi_0371 0.51 -0.6 399,889 + Echvi_0371 0.62 -0.0 399,890 - Echvi_0371 0.62 -0.2 399,891 + Echvi_0371 0.62 -1.2 399,900 - Echvi_0371 0.63 +1.4 399,902 - Echvi_0371 0.64 -0.6 399,902 - Echvi_0371 0.64 -0.4 399,915 + Echvi_0371 0.66 -0.4 399,950 + Echvi_0371 0.71 -0.1 399,997 + Echvi_0371 0.79 -0.1 399,997 + Echvi_0371 0.79 +1.4 399,997 + Echvi_0371 0.79 -0.5 400,033 - Echvi_0371 0.85 -0.4 400,059 - Echvi_0371 0.89 +1.6 400,077 - +1.1 400,156 + -1.4 400,156 + +1.5 400,156 + -0.3 400,156 + +3.7 400,156 + +0.5 400,156 + +1.1 400,157 - +1.9 400,157 - +0.6 400,157 - +0.2 400,157 - -0.2 400,157 - -0.4 400,169 - +0.7 400,191 + +0.8 400,228 + -1.2 400,228 + -1.8 400,228 + -1.3 400,232 + -0.7 400,232 + +0.3 400,232 + +1.4 400,233 - -0.2 400,291 + +0.2 400,819 - Echvi_0372 0.50 -1.1 400,829 + Echvi_0372 0.51 -1.5 400,857 + +1.1 401,004 + Echvi_0372 0.68 -1.0 401,025 - Echvi_0372 0.70 -2.4 401,121 + Echvi_0372 0.79 +0.2 401,159 + Echvi_0372 0.83 -0.9 401,163 - Echvi_0372 0.83 +2.1 401,163 - Echvi_0372 0.83 -0.2 401,217 + Echvi_0372 0.88 -0.5 401,218 - Echvi_0372 0.88 -0.9 401,218 - Echvi_0372 0.88 +2.7 401,221 + Echvi_0372 0.89 -2.4 401,223 + Echvi_0372 0.89 -0.2 401,223 + Echvi_0372 0.89 -1.2 401,223 + Echvi_0372 0.89 -0.1 401,223 + Echvi_0372 0.89 +0.2 401,223 + Echvi_0372 0.89 -1.5 401,223 + Echvi_0372 0.89 +0.6 401,224 - Echvi_0372 0.89 -0.5 401,305 - -0.4 401,334 + +2.0 401,337 + +0.6 401,342 + +2.0 401,342 + +0.1 401,343 - +1.1 401,343 - -0.5 401,349 - +1.2 401,349 - -1.6 401,365 + -0.8 401,365 + -0.2 401,366 - -0.4 401,372 - -0.9 401,400 + Echvi_0373 0.14 -0.9 401,400 + Echvi_0373 0.14 +0.5 401,400 + Echvi_0373 0.14 +1.7 401,401 - Echvi_0373 0.14 -0.2 401,406 + Echvi_0373 0.16 -0.4 401,406 + Echvi_0373 0.16 -0.2 401,406 + Echvi_0373 0.16 -0.0 401,407 - Echvi_0373 0.16 +0.8 401,409 + Echvi_0373 0.16 +1.1 401,410 - Echvi_0373 0.17 +0.7 401,410 - Echvi_0373 0.17 +0.2 401,418 + Echvi_0373 0.19 +0.4 401,418 + Echvi_0373 0.19 -0.5 401,419 - Echvi_0373 0.19 -0.4 401,427 + Echvi_0373 0.21 +0.5 401,427 + Echvi_0373 0.21 -0.5 401,428 - Echvi_0373 0.21 +0.2 401,512 + Echvi_0373 0.42 +0.1 401,512 + Echvi_0373 0.42 -0.5 401,512 + Echvi_0373 0.42 +1.4 401,515 + Echvi_0373 0.42 -0.6 401,516 - Echvi_0373 0.43 -0.3 401,516 - Echvi_0373 0.43 -0.3 401,532 + Echvi_0373 0.47 -1.0 401,560 + Echvi_0373 0.54 -1.8 401,560 + Echvi_0373 0.54 -0.2 401,560 + Echvi_0373 0.54 -0.2 401,561 - Echvi_0373 0.54 +0.9 401,561 - Echvi_0373 0.54 +0.7 401,722 + +0.3 401,740 - -0.3 401,740 - -0.1 401,785 + -0.4 401,806 - +0.9 401,857 - Echvi_0374 0.10 -1.2 401,930 + Echvi_0374 0.18 -0.6 401,988 - Echvi_0374 0.24 -0.2 402,038 - Echvi_0374 0.29 -0.3 402,145 + Echvi_0374 0.41 -0.3 402,146 - Echvi_0374 0.41 -0.3 402,146 - Echvi_0374 0.41 +0.2 402,147 + Echvi_0374 0.41 +0.5 402,147 + Echvi_0374 0.41 +0.4 402,148 - Echvi_0374 0.41 -1.1 402,180 - Echvi_0374 0.44 +1.4 402,199 - Echvi_0374 0.46 -0.6 402,289 + Echvi_0374 0.56 +0.0 402,290 - Echvi_0374 0.56 +0.6 402,336 + Echvi_0374 0.61 +0.5 402,336 + Echvi_0374 0.61 +0.0
Or see this region's nucleotide sequence