Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4506 and EX28DRAFT_4507 are separated by 42 nucleotides EX28DRAFT_4507 and EX28DRAFT_4508 are separated by 39 nucleotides EX28DRAFT_4508 and EX28DRAFT_4509 are separated by 0 nucleotides
EX28DRAFT_4506: EX28DRAFT_4506 - UbiD family decarboxylase, at 71,752 to 73,245
_4506
EX28DRAFT_4507: EX28DRAFT_4507 - 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases, at 73,288 to 73,989
_4507
EX28DRAFT_4508: EX28DRAFT_4508 - hypothetical protein, at 74,029 to 74,172
_4508
EX28DRAFT_4509: EX28DRAFT_4509 - fatty oxidation complex, beta subunit FadA, at 74,173 to 75,336
_4509
Position (kb) 73
74 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 73.237 kb on - strand at 73.255 kb on + strand at 73.264 kb on + strand at 73.264 kb on + strand at 73.264 kb on + strand at 73.264 kb on + strand at 73.265 kb on - strand at 73.340 kb on + strand at 73.340 kb on + strand at 73.340 kb on + strand at 73.340 kb on + strand at 73.340 kb on + strand at 73.340 kb on + strand at 73.758 kb on - strand, within EX28DRAFT_4507 at 73.883 kb on - strand, within EX28DRAFT_4507 at 73.883 kb on - strand, within EX28DRAFT_4507 at 73.883 kb on - strand, within EX28DRAFT_4507 at 73.988 kb on - strand at 74.030 kb on + strand at 74.030 kb on + strand at 74.103 kb on + strand, within EX28DRAFT_4508 at 74.104 kb on - strand, within EX28DRAFT_4508 at 74.104 kb on - strand, within EX28DRAFT_4508 at 74.174 kb on + strand at 74.175 kb on - strand at 74.284 kb on - strand at 74.379 kb on + strand, within EX28DRAFT_4509 at 74.536 kb on + strand, within EX28DRAFT_4509 at 74.629 kb on - strand, within EX28DRAFT_4509 at 74.629 kb on - strand, within EX28DRAFT_4509 at 74.689 kb on + strand, within EX28DRAFT_4509 at 74.689 kb on + strand, within EX28DRAFT_4509 at 74.690 kb on - strand, within EX28DRAFT_4509 at 74.737 kb on + strand, within EX28DRAFT_4509 at 74.781 kb on + strand, within EX28DRAFT_4509 at 74.781 kb on + strand, within EX28DRAFT_4509 at 74.781 kb on + strand, within EX28DRAFT_4509 at 74.782 kb on - strand, within EX28DRAFT_4509
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 73,237 - -2.7 73,255 + +0.5 73,264 + -0.4 73,264 + +1.5 73,264 + -0.2 73,264 + -2.1 73,265 - -0.6 73,340 + -2.6 73,340 + -2.1 73,340 + -1.9 73,340 + -1.7 73,340 + -1.7 73,340 + -2.0 73,758 - EX28DRAFT_4507 0.67 -2.8 73,883 - EX28DRAFT_4507 0.85 -4.4 73,883 - EX28DRAFT_4507 0.85 -2.2 73,883 - EX28DRAFT_4507 0.85 -0.8 73,988 - +1.1 74,030 + +0.1 74,030 + +0.7 74,103 + EX28DRAFT_4508 0.51 +0.2 74,104 - EX28DRAFT_4508 0.52 +1.1 74,104 - EX28DRAFT_4508 0.52 +0.2 74,174 + +1.1 74,175 - +0.1 74,284 - +0.7 74,379 + EX28DRAFT_4509 0.18 +0.2 74,536 + EX28DRAFT_4509 0.31 +0.1 74,629 - EX28DRAFT_4509 0.39 +0.5 74,629 - EX28DRAFT_4509 0.39 +0.5 74,689 + EX28DRAFT_4509 0.44 +0.6 74,689 + EX28DRAFT_4509 0.44 +2.3 74,690 - EX28DRAFT_4509 0.44 +0.4 74,737 + EX28DRAFT_4509 0.48 -0.1 74,781 + EX28DRAFT_4509 0.52 +0.4 74,781 + EX28DRAFT_4509 0.52 +1.0 74,781 + EX28DRAFT_4509 0.52 -0.9 74,782 - EX28DRAFT_4509 0.52 +0.3
Or see this region's nucleotide sequence