Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4453 and EX28DRAFT_4454 are separated by 241 nucleotides EX28DRAFT_4454 and EX28DRAFT_4455 are separated by 13 nucleotides
EX28DRAFT_4453: EX28DRAFT_4453 - transcription termination factor Rho, at 19,269 to 20,528
_4453
EX28DRAFT_4454: EX28DRAFT_4454 - undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase, at 20,770 to 21,873
_4454
EX28DRAFT_4455: EX28DRAFT_4455 - Chain length determinant protein, at 21,887 to 22,933
_4455
Position (kb) 20
21
22 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 20.526 kb on + strand at 20.585 kb on - strand at 20.586 kb on + strand at 20.586 kb on + strand at 20.587 kb on - strand at 20.587 kb on - strand at 20.587 kb on - strand at 20.587 kb on - strand at 20.587 kb on - strand at 20.592 kb on - strand at 20.594 kb on + strand at 20.595 kb on - strand at 20.595 kb on - strand at 20.637 kb on + strand at 20.638 kb on - strand at 20.659 kb on - strand at 20.674 kb on - strand at 20.703 kb on + strand at 20.706 kb on - strand at 20.706 kb on - strand at 20.732 kb on + strand at 20.734 kb on + strand at 20.735 kb on - strand at 20.735 kb on - strand at 20.735 kb on - strand at 20.735 kb on - strand at 20.746 kb on + strand at 20.777 kb on + strand at 20.777 kb on + strand at 20.778 kb on - strand at 20.778 kb on - strand at 20.778 kb on - strand at 20.784 kb on + strand at 20.806 kb on - strand at 20.817 kb on + strand at 20.844 kb on + strand at 20.845 kb on - strand at 20.905 kb on - strand, within EX28DRAFT_4454 at 20.974 kb on + strand, within EX28DRAFT_4454 at 20.974 kb on + strand, within EX28DRAFT_4454 at 20.975 kb on - strand, within EX28DRAFT_4454 at 20.975 kb on - strand, within EX28DRAFT_4454 at 20.976 kb on + strand, within EX28DRAFT_4454 at 20.995 kb on + strand, within EX28DRAFT_4454 at 21.051 kb on + strand, within EX28DRAFT_4454 at 21.051 kb on + strand, within EX28DRAFT_4454 at 21.051 kb on + strand, within EX28DRAFT_4454 at 21.052 kb on - strand, within EX28DRAFT_4454 at 21.089 kb on + strand, within EX28DRAFT_4454 at 21.089 kb on + strand, within EX28DRAFT_4454 at 21.090 kb on - strand, within EX28DRAFT_4454 at 21.090 kb on - strand, within EX28DRAFT_4454 at 21.090 kb on - strand, within EX28DRAFT_4454 at 21.093 kb on + strand, within EX28DRAFT_4454 at 21.093 kb on + strand, within EX28DRAFT_4454 at 21.129 kb on + strand, within EX28DRAFT_4454 at 21.217 kb on - strand, within EX28DRAFT_4454 at 21.300 kb on - strand, within EX28DRAFT_4454 at 21.316 kb on + strand, within EX28DRAFT_4454 at 21.316 kb on + strand, within EX28DRAFT_4454 at 21.317 kb on - strand, within EX28DRAFT_4454 at 21.318 kb on + strand, within EX28DRAFT_4454 at 21.318 kb on + strand, within EX28DRAFT_4454 at 21.319 kb on - strand, within EX28DRAFT_4454 at 21.319 kb on - strand, within EX28DRAFT_4454 at 21.319 kb on - strand, within EX28DRAFT_4454 at 21.327 kb on + strand, within EX28DRAFT_4454 at 21.327 kb on + strand, within EX28DRAFT_4454 at 21.327 kb on + strand, within EX28DRAFT_4454 at 21.328 kb on - strand, within EX28DRAFT_4454 at 21.364 kb on + strand, within EX28DRAFT_4454 at 21.364 kb on + strand, within EX28DRAFT_4454 at 21.364 kb on + strand, within EX28DRAFT_4454 at 21.366 kb on + strand, within EX28DRAFT_4454 at 21.403 kb on - strand, within EX28DRAFT_4454 at 21.403 kb on - strand, within EX28DRAFT_4454 at 21.408 kb on - strand, within EX28DRAFT_4454 at 21.408 kb on - strand, within EX28DRAFT_4454 at 21.408 kb on - strand, within EX28DRAFT_4454 at 21.408 kb on - strand, within EX28DRAFT_4454 at 21.435 kb on + strand, within EX28DRAFT_4454 at 21.444 kb on + strand, within EX28DRAFT_4454 at 21.444 kb on + strand, within EX28DRAFT_4454 at 21.447 kb on + strand, within EX28DRAFT_4454 at 21.448 kb on - strand, within EX28DRAFT_4454 at 21.485 kb on + strand, within EX28DRAFT_4454 at 21.485 kb on + strand, within EX28DRAFT_4454 at 21.485 kb on + strand, within EX28DRAFT_4454 at 21.485 kb on + strand, within EX28DRAFT_4454 at 21.486 kb on - strand, within EX28DRAFT_4454 at 21.553 kb on - strand, within EX28DRAFT_4454 at 21.553 kb on - strand, within EX28DRAFT_4454 at 21.557 kb on - strand, within EX28DRAFT_4454 at 21.660 kb on + strand, within EX28DRAFT_4454 at 21.660 kb on + strand, within EX28DRAFT_4454 at 21.663 kb on + strand, within EX28DRAFT_4454 at 21.679 kb on - strand, within EX28DRAFT_4454 at 21.711 kb on + strand, within EX28DRAFT_4454 at 21.711 kb on + strand, within EX28DRAFT_4454 at 21.735 kb on + strand, within EX28DRAFT_4454 at 21.801 kb on - strand at 21.820 kb on - strand at 21.822 kb on + strand at 21.840 kb on + strand at 21.840 kb on + strand at 21.841 kb on - strand at 21.841 kb on - strand at 21.855 kb on + strand at 21.855 kb on + strand at 21.855 kb on + strand at 21.855 kb on + strand at 21.856 kb on - strand at 21.863 kb on + strand at 21.863 kb on + strand at 21.863 kb on + strand at 21.863 kb on + strand at 21.864 kb on - strand at 21.867 kb on + strand at 21.867 kb on + strand at 21.867 kb on + strand at 21.868 kb on - strand at 21.883 kb on + strand at 21.883 kb on + strand at 21.883 kb on + strand at 22.025 kb on + strand, within EX28DRAFT_4455 at 22.025 kb on + strand, within EX28DRAFT_4455 at 22.025 kb on + strand, within EX28DRAFT_4455 at 22.027 kb on + strand, within EX28DRAFT_4455 at 22.027 kb on + strand, within EX28DRAFT_4455 at 22.028 kb on - strand, within EX28DRAFT_4455 at 22.101 kb on - strand, within EX28DRAFT_4455 at 22.104 kb on - strand, within EX28DRAFT_4455 at 22.256 kb on + strand, within EX28DRAFT_4455 at 22.257 kb on - strand, within EX28DRAFT_4455 at 22.257 kb on - strand, within EX28DRAFT_4455 at 22.276 kb on + strand, within EX28DRAFT_4455 at 22.276 kb on + strand, within EX28DRAFT_4455 at 22.418 kb on + strand, within EX28DRAFT_4455 at 22.418 kb on + strand, within EX28DRAFT_4455 at 22.456 kb on + strand, within EX28DRAFT_4455 at 22.600 kb on + strand, within EX28DRAFT_4455 at 22.730 kb on + strand, within EX28DRAFT_4455 at 22.762 kb on + strand, within EX28DRAFT_4455 at 22.799 kb on + strand, within EX28DRAFT_4455 at 22.800 kb on - strand, within EX28DRAFT_4455 at 22.800 kb on - strand, within EX28DRAFT_4455
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 20,526 + +1.2 20,585 - -0.9 20,586 + +0.1 20,586 + -0.0 20,587 - +0.3 20,587 - +0.3 20,587 - -0.2 20,587 - +0.8 20,587 - +1.8 20,592 - +0.0 20,594 + +0.6 20,595 - -0.5 20,595 - +0.5 20,637 + +0.8 20,638 - -0.1 20,659 - +0.3 20,674 - +0.2 20,703 + -0.9 20,706 - +0.0 20,706 - +0.3 20,732 + +0.4 20,734 + +0.4 20,735 - +1.0 20,735 - -0.0 20,735 - +0.3 20,735 - -0.2 20,746 + -0.3 20,777 + +1.9 20,777 + +0.4 20,778 - +0.3 20,778 - +0.5 20,778 - -0.1 20,784 + +0.8 20,806 - -0.2 20,817 + +1.2 20,844 + +0.9 20,845 - -0.8 20,905 - EX28DRAFT_4454 0.12 +0.7 20,974 + EX28DRAFT_4454 0.18 -1.1 20,974 + EX28DRAFT_4454 0.18 +1.2 20,975 - EX28DRAFT_4454 0.19 -0.8 20,975 - EX28DRAFT_4454 0.19 +0.4 20,976 + EX28DRAFT_4454 0.19 +0.1 20,995 + EX28DRAFT_4454 0.20 +0.5 21,051 + EX28DRAFT_4454 0.25 +1.0 21,051 + EX28DRAFT_4454 0.25 +0.6 21,051 + EX28DRAFT_4454 0.25 +0.2 21,052 - EX28DRAFT_4454 0.26 -0.4 21,089 + EX28DRAFT_4454 0.29 +0.5 21,089 + EX28DRAFT_4454 0.29 +1.6 21,090 - EX28DRAFT_4454 0.29 +1.3 21,090 - EX28DRAFT_4454 0.29 +0.6 21,090 - EX28DRAFT_4454 0.29 +0.6 21,093 + EX28DRAFT_4454 0.29 +0.3 21,093 + EX28DRAFT_4454 0.29 +0.6 21,129 + EX28DRAFT_4454 0.33 +0.4 21,217 - EX28DRAFT_4454 0.40 +0.6 21,300 - EX28DRAFT_4454 0.48 +0.2 21,316 + EX28DRAFT_4454 0.49 +0.0 21,316 + EX28DRAFT_4454 0.49 -0.3 21,317 - EX28DRAFT_4454 0.50 +1.9 21,318 + EX28DRAFT_4454 0.50 +1.9 21,318 + EX28DRAFT_4454 0.50 +0.8 21,319 - EX28DRAFT_4454 0.50 +0.5 21,319 - EX28DRAFT_4454 0.50 +1.0 21,319 - EX28DRAFT_4454 0.50 +0.4 21,327 + EX28DRAFT_4454 0.50 +0.8 21,327 + EX28DRAFT_4454 0.50 -0.7 21,327 + EX28DRAFT_4454 0.50 -0.0 21,328 - EX28DRAFT_4454 0.51 -0.3 21,364 + EX28DRAFT_4454 0.54 +0.9 21,364 + EX28DRAFT_4454 0.54 +0.7 21,364 + EX28DRAFT_4454 0.54 +1.6 21,366 + EX28DRAFT_4454 0.54 +0.8 21,403 - EX28DRAFT_4454 0.57 +0.3 21,403 - EX28DRAFT_4454 0.57 -0.9 21,408 - EX28DRAFT_4454 0.58 +0.4 21,408 - EX28DRAFT_4454 0.58 +1.3 21,408 - EX28DRAFT_4454 0.58 +0.6 21,408 - EX28DRAFT_4454 0.58 +0.2 21,435 + EX28DRAFT_4454 0.60 +0.2 21,444 + EX28DRAFT_4454 0.61 +0.7 21,444 + EX28DRAFT_4454 0.61 +0.8 21,447 + EX28DRAFT_4454 0.61 +1.0 21,448 - EX28DRAFT_4454 0.61 +0.7 21,485 + EX28DRAFT_4454 0.65 +0.0 21,485 + EX28DRAFT_4454 0.65 -0.1 21,485 + EX28DRAFT_4454 0.65 +0.7 21,485 + EX28DRAFT_4454 0.65 +0.3 21,486 - EX28DRAFT_4454 0.65 +0.3 21,553 - EX28DRAFT_4454 0.71 +0.0 21,553 - EX28DRAFT_4454 0.71 +0.0 21,557 - EX28DRAFT_4454 0.71 +0.3 21,660 + EX28DRAFT_4454 0.81 +0.1 21,660 + EX28DRAFT_4454 0.81 +0.3 21,663 + EX28DRAFT_4454 0.81 +0.1 21,679 - EX28DRAFT_4454 0.82 +0.6 21,711 + EX28DRAFT_4454 0.85 +0.8 21,711 + EX28DRAFT_4454 0.85 +1.7 21,735 + EX28DRAFT_4454 0.87 +0.5 21,801 - +0.7 21,820 - -1.0 21,822 + +0.9 21,840 + +0.0 21,840 + +0.3 21,841 - -0.2 21,841 - -0.4 21,855 + -0.0 21,855 + -0.3 21,855 + +0.4 21,855 + +0.5 21,856 - -4.0 21,863 + -0.8 21,863 + +0.3 21,863 + -2.7 21,863 + +0.2 21,864 - -0.5 21,867 + +0.6 21,867 + +0.3 21,867 + +0.8 21,868 - +0.3 21,883 + +0.7 21,883 + -1.2 21,883 + -0.2 22,025 + EX28DRAFT_4455 0.13 +3.8 22,025 + EX28DRAFT_4455 0.13 +0.2 22,025 + EX28DRAFT_4455 0.13 -0.6 22,027 + EX28DRAFT_4455 0.13 -0.2 22,027 + EX28DRAFT_4455 0.13 +0.1 22,028 - EX28DRAFT_4455 0.13 +0.7 22,101 - EX28DRAFT_4455 0.20 -0.1 22,104 - EX28DRAFT_4455 0.21 -0.1 22,256 + EX28DRAFT_4455 0.35 +0.7 22,257 - EX28DRAFT_4455 0.35 +0.9 22,257 - EX28DRAFT_4455 0.35 -1.7 22,276 + EX28DRAFT_4455 0.37 -0.2 22,276 + EX28DRAFT_4455 0.37 -0.4 22,418 + EX28DRAFT_4455 0.51 -0.3 22,418 + EX28DRAFT_4455 0.51 +2.3 22,456 + EX28DRAFT_4455 0.54 -0.9 22,600 + EX28DRAFT_4455 0.68 +0.3 22,730 + EX28DRAFT_4455 0.81 +0.3 22,762 + EX28DRAFT_4455 0.84 -1.5 22,799 + EX28DRAFT_4455 0.87 -1.5 22,800 - EX28DRAFT_4455 0.87 +0.2 22,800 - EX28DRAFT_4455 0.87 -0.3
Or see this region's nucleotide sequence