Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4443 and EX28DRAFT_4444 overlap by 1 nucleotides EX28DRAFT_4444 and EX28DRAFT_4445 are separated by 45 nucleotides
EX28DRAFT_4443: EX28DRAFT_4443 - dihydroxy-acid dehydratase, at 6,825 to 8,675
_4443
EX28DRAFT_4444: EX28DRAFT_4444 - threonine ammonia-lyase, biosynthetic, long form, at 8,675 to 10,222
_4444
EX28DRAFT_4445: EX28DRAFT_4445 - Transcriptional regulator, at 10,268 to 11,158
_4445
Position (kb)
8
9
10
11 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 7.760 kb on + strand, within EX28DRAFT_4443 at 7.761 kb on - strand, within EX28DRAFT_4443 at 7.761 kb on - strand, within EX28DRAFT_4443 at 7.785 kb on + strand, within EX28DRAFT_4443 at 7.786 kb on - strand, within EX28DRAFT_4443 at 7.791 kb on - strand, within EX28DRAFT_4443 at 7.801 kb on + strand, within EX28DRAFT_4443 at 7.802 kb on - strand, within EX28DRAFT_4443 at 7.802 kb on - strand, within EX28DRAFT_4443 at 8.064 kb on + strand, within EX28DRAFT_4443 at 8.100 kb on + strand, within EX28DRAFT_4443 at 8.188 kb on - strand, within EX28DRAFT_4443 at 8.255 kb on + strand, within EX28DRAFT_4443 at 8.256 kb on - strand, within EX28DRAFT_4443 at 8.328 kb on - strand, within EX28DRAFT_4443 at 8.661 kb on - strand at 8.753 kb on + strand at 8.753 kb on + strand at 8.754 kb on - strand at 9.299 kb on - strand, within EX28DRAFT_4444 at 9.449 kb on + strand, within EX28DRAFT_4444 at 9.475 kb on + strand, within EX28DRAFT_4444 at 9.485 kb on - strand, within EX28DRAFT_4444 at 9.778 kb on + strand, within EX28DRAFT_4444 at 9.779 kb on - strand, within EX28DRAFT_4444 at 9.811 kb on + strand, within EX28DRAFT_4444 at 9.939 kb on - strand, within EX28DRAFT_4444 at 10.054 kb on + strand, within EX28DRAFT_4444 at 10.055 kb on - strand, within EX28DRAFT_4444 at 10.166 kb on + strand at 10.238 kb on + strand at 10.303 kb on + strand at 10.501 kb on - strand, within EX28DRAFT_4445 at 10.579 kb on + strand, within EX28DRAFT_4445 at 10.580 kb on - strand, within EX28DRAFT_4445 at 10.849 kb on + strand, within EX28DRAFT_4445 at 10.851 kb on + strand, within EX28DRAFT_4445 at 11.150 kb on + strand at 11.151 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 7,760 + EX28DRAFT_4443 0.51 -3.0 7,761 - EX28DRAFT_4443 0.51 -2.4 7,761 - EX28DRAFT_4443 0.51 -1.1 7,785 + EX28DRAFT_4443 0.52 -1.4 7,786 - EX28DRAFT_4443 0.52 -1.2 7,791 - EX28DRAFT_4443 0.52 -0.2 7,801 + EX28DRAFT_4443 0.53 -1.5 7,802 - EX28DRAFT_4443 0.53 -2.7 7,802 - EX28DRAFT_4443 0.53 -4.7 8,064 + EX28DRAFT_4443 0.67 -4.4 8,100 + EX28DRAFT_4443 0.69 -1.1 8,188 - EX28DRAFT_4443 0.74 -2.2 8,255 + EX28DRAFT_4443 0.77 +0.0 8,256 - EX28DRAFT_4443 0.77 -2.1 8,328 - EX28DRAFT_4443 0.81 +0.9 8,661 - -3.6 8,753 + -1.2 8,753 + -2.4 8,754 - -4.0 9,299 - EX28DRAFT_4444 0.40 -3.2 9,449 + EX28DRAFT_4444 0.50 -3.1 9,475 + EX28DRAFT_4444 0.52 -1.5 9,485 - EX28DRAFT_4444 0.52 -3.8 9,778 + EX28DRAFT_4444 0.71 -3.3 9,779 - EX28DRAFT_4444 0.71 -2.0 9,811 + EX28DRAFT_4444 0.73 -4.7 9,939 - EX28DRAFT_4444 0.82 -2.7 10,054 + EX28DRAFT_4444 0.89 +0.6 10,055 - EX28DRAFT_4444 0.89 -1.0 10,166 + -2.3 10,238 + -0.0 10,303 + -1.6 10,501 - EX28DRAFT_4445 0.26 -1.1 10,579 + EX28DRAFT_4445 0.35 -1.6 10,580 - EX28DRAFT_4445 0.35 -1.1 10,849 + EX28DRAFT_4445 0.65 -0.8 10,851 + EX28DRAFT_4445 0.65 +1.3 11,150 + -5.1 11,151 - -1.0
Or see this region's nucleotide sequence