Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4365 and EX28DRAFT_4366 overlap by 4 nucleotides EX28DRAFT_4366 and EX28DRAFT_4367 are separated by 88 nucleotides EX28DRAFT_4367 and EX28DRAFT_4368 overlap by 7 nucleotides
EX28DRAFT_4365: EX28DRAFT_4365 - DNA-binding winged-HTH domains, at 32,710 to 33,453
_4365
EX28DRAFT_4366: EX28DRAFT_4366 - hypothetical protein, at 33,450 to 33,920
_4366
EX28DRAFT_4367: EX28DRAFT_4367 - haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED, at 34,009 to 34,608
_4367
EX28DRAFT_4368: EX28DRAFT_4368 - Predicted membrane protein, at 34,602 to 35,483
_4368
Position (kb)
33
34 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 32.511 kb on - strand at 32.622 kb on + strand at 32.653 kb on + strand at 32.654 kb on - strand at 32.654 kb on - strand at 32.657 kb on + strand at 32.865 kb on + strand, within EX28DRAFT_4365 at 32.911 kb on - strand, within EX28DRAFT_4365 at 33.033 kb on - strand, within EX28DRAFT_4365 at 33.080 kb on + strand, within EX28DRAFT_4365 at 33.081 kb on - strand, within EX28DRAFT_4365 at 33.164 kb on + strand, within EX28DRAFT_4365 at 33.167 kb on + strand, within EX28DRAFT_4365 at 33.168 kb on - strand, within EX28DRAFT_4365 at 33.171 kb on - strand, within EX28DRAFT_4365 at 33.172 kb on + strand, within EX28DRAFT_4365 at 33.173 kb on - strand, within EX28DRAFT_4365 at 33.173 kb on - strand, within EX28DRAFT_4365 at 33.174 kb on + strand, within EX28DRAFT_4365 at 33.174 kb on + strand, within EX28DRAFT_4365 at 33.175 kb on - strand, within EX28DRAFT_4365 at 33.175 kb on - strand, within EX28DRAFT_4365 at 33.253 kb on + strand, within EX28DRAFT_4365 at 33.261 kb on + strand, within EX28DRAFT_4365 at 33.283 kb on + strand, within EX28DRAFT_4365 at 33.332 kb on - strand, within EX28DRAFT_4365 at 33.352 kb on - strand, within EX28DRAFT_4365 at 33.355 kb on - strand, within EX28DRAFT_4365 at 33.417 kb on - strand at 33.417 kb on - strand at 33.417 kb on - strand at 33.421 kb on - strand at 33.421 kb on - strand at 33.584 kb on + strand, within EX28DRAFT_4366 at 33.647 kb on + strand, within EX28DRAFT_4366 at 33.659 kb on - strand, within EX28DRAFT_4366 at 33.696 kb on + strand, within EX28DRAFT_4366 at 33.697 kb on - strand, within EX28DRAFT_4366 at 33.711 kb on + strand, within EX28DRAFT_4366 at 33.712 kb on - strand, within EX28DRAFT_4366 at 33.731 kb on - strand, within EX28DRAFT_4366 at 33.786 kb on - strand, within EX28DRAFT_4366 at 33.897 kb on + strand at 33.898 kb on - strand at 33.898 kb on - strand at 33.918 kb on + strand at 33.938 kb on + strand at 33.938 kb on + strand at 33.938 kb on + strand at 33.952 kb on - strand at 33.981 kb on - strand at 33.981 kb on - strand at 33.981 kb on - strand at 33.981 kb on - strand at 34.004 kb on + strand at 34.015 kb on + strand at 34.015 kb on + strand at 34.015 kb on + strand at 34.017 kb on + strand at 34.028 kb on + strand at 34.038 kb on - strand at 34.208 kb on + strand, within EX28DRAFT_4367 at 34.209 kb on - strand, within EX28DRAFT_4367 at 34.209 kb on - strand, within EX28DRAFT_4367 at 34.250 kb on + strand, within EX28DRAFT_4367 at 34.251 kb on - strand, within EX28DRAFT_4367 at 34.290 kb on + strand, within EX28DRAFT_4367 at 34.333 kb on - strand, within EX28DRAFT_4367 at 34.370 kb on - strand, within EX28DRAFT_4367 at 34.402 kb on + strand, within EX28DRAFT_4367 at 34.518 kb on + strand, within EX28DRAFT_4367 at 34.518 kb on + strand, within EX28DRAFT_4367 at 34.520 kb on + strand, within EX28DRAFT_4367 at 34.520 kb on + strand, within EX28DRAFT_4367 at 34.520 kb on + strand, within EX28DRAFT_4367 at 34.520 kb on + strand, within EX28DRAFT_4367 at 34.521 kb on - strand, within EX28DRAFT_4367 at 34.521 kb on - strand, within EX28DRAFT_4367 at 34.521 kb on - strand, within EX28DRAFT_4367 at 34.521 kb on - strand, within EX28DRAFT_4367 at 34.521 kb on - strand, within EX28DRAFT_4367 at 34.543 kb on - strand, within EX28DRAFT_4367 at 34.585 kb on + strand at 34.586 kb on - strand at 34.601 kb on + strand at 34.601 kb on + strand at 34.601 kb on + strand at 34.606 kb on + strand at 34.680 kb on - strand at 34.869 kb on + strand, within EX28DRAFT_4368 at 34.869 kb on + strand, within EX28DRAFT_4368 at 34.870 kb on - strand, within EX28DRAFT_4368 at 34.870 kb on - strand, within EX28DRAFT_4368
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 32,511 - -0.8 32,622 + -1.6 32,653 + -0.5 32,654 - +0.1 32,654 - +0.0 32,657 + -1.6 32,865 + EX28DRAFT_4365 0.21 +0.1 32,911 - EX28DRAFT_4365 0.27 +0.3 33,033 - EX28DRAFT_4365 0.43 -0.6 33,080 + EX28DRAFT_4365 0.50 +1.2 33,081 - EX28DRAFT_4365 0.50 +0.1 33,164 + EX28DRAFT_4365 0.61 -0.0 33,167 + EX28DRAFT_4365 0.61 +1.1 33,168 - EX28DRAFT_4365 0.62 -0.9 33,171 - EX28DRAFT_4365 0.62 +0.3 33,172 + EX28DRAFT_4365 0.62 -0.1 33,173 - EX28DRAFT_4365 0.62 -0.1 33,173 - EX28DRAFT_4365 0.62 +0.1 33,174 + EX28DRAFT_4365 0.62 +0.8 33,174 + EX28DRAFT_4365 0.62 +0.6 33,175 - EX28DRAFT_4365 0.62 -1.2 33,175 - EX28DRAFT_4365 0.62 -0.2 33,253 + EX28DRAFT_4365 0.73 +0.2 33,261 + EX28DRAFT_4365 0.74 +0.6 33,283 + EX28DRAFT_4365 0.77 +0.2 33,332 - EX28DRAFT_4365 0.84 -0.6 33,352 - EX28DRAFT_4365 0.86 -0.4 33,355 - EX28DRAFT_4365 0.87 +0.3 33,417 - -0.0 33,417 - -1.7 33,417 - -0.4 33,421 - -0.5 33,421 - -0.1 33,584 + EX28DRAFT_4366 0.28 -1.2 33,647 + EX28DRAFT_4366 0.42 -0.0 33,659 - EX28DRAFT_4366 0.44 +0.1 33,696 + EX28DRAFT_4366 0.52 -0.0 33,697 - EX28DRAFT_4366 0.52 +0.4 33,711 + EX28DRAFT_4366 0.55 -2.1 33,712 - EX28DRAFT_4366 0.56 -0.2 33,731 - EX28DRAFT_4366 0.60 +1.1 33,786 - EX28DRAFT_4366 0.71 -0.7 33,897 + +0.3 33,898 - +0.2 33,898 - -0.8 33,918 + +0.5 33,938 + +0.2 33,938 + -0.2 33,938 + -0.0 33,952 - -0.6 33,981 - -0.2 33,981 - +1.6 33,981 - -1.6 33,981 - +1.2 34,004 + -0.4 34,015 + +0.2 34,015 + +0.9 34,015 + -0.6 34,017 + +0.6 34,028 + -1.3 34,038 - -1.2 34,208 + EX28DRAFT_4367 0.33 -1.6 34,209 - EX28DRAFT_4367 0.33 +0.1 34,209 - EX28DRAFT_4367 0.33 -0.0 34,250 + EX28DRAFT_4367 0.40 +0.7 34,251 - EX28DRAFT_4367 0.40 +0.4 34,290 + EX28DRAFT_4367 0.47 +1.1 34,333 - EX28DRAFT_4367 0.54 -2.8 34,370 - EX28DRAFT_4367 0.60 -0.1 34,402 + EX28DRAFT_4367 0.66 -0.3 34,518 + EX28DRAFT_4367 0.85 -0.1 34,518 + EX28DRAFT_4367 0.85 -0.1 34,520 + EX28DRAFT_4367 0.85 +0.2 34,520 + EX28DRAFT_4367 0.85 -0.7 34,520 + EX28DRAFT_4367 0.85 -0.3 34,520 + EX28DRAFT_4367 0.85 +0.1 34,521 - EX28DRAFT_4367 0.85 -0.3 34,521 - EX28DRAFT_4367 0.85 -1.2 34,521 - EX28DRAFT_4367 0.85 -0.3 34,521 - EX28DRAFT_4367 0.85 -0.5 34,521 - EX28DRAFT_4367 0.85 -0.2 34,543 - EX28DRAFT_4367 0.89 +0.7 34,585 + -0.4 34,586 - +0.1 34,601 + +0.1 34,601 + -1.1 34,601 + -0.0 34,606 + -0.3 34,680 - -0.3 34,869 + EX28DRAFT_4368 0.30 +0.3 34,869 + EX28DRAFT_4368 0.30 +0.1 34,870 - EX28DRAFT_4368 0.30 +0.1 34,870 - EX28DRAFT_4368 0.30 -0.3
Or see this region's nucleotide sequence