Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4358 and EX28DRAFT_4359 are separated by 14 nucleotides EX28DRAFT_4359 and EX28DRAFT_4360 are separated by 17 nucleotides
EX28DRAFT_4358: EX28DRAFT_4358 - N-acyl-D-glucosamine 2-epimerase, at 23,586 to 24,827
_4358
EX28DRAFT_4359: EX28DRAFT_4359 - Tagatose-1,6-bisphosphate aldolase, at 24,842 to 25,717
_4359
EX28DRAFT_4360: EX28DRAFT_4360 - 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases, at 25,735 to 26,625
_4360
Position (kb) 24
25
26 Strain fitness (log2 ratio) -1
0
1 at 23.851 kb on + strand, within EX28DRAFT_4358 at 23.898 kb on + strand, within EX28DRAFT_4358 at 23.898 kb on + strand, within EX28DRAFT_4358 at 23.899 kb on - strand, within EX28DRAFT_4358 at 23.899 kb on - strand, within EX28DRAFT_4358 at 24.139 kb on + strand, within EX28DRAFT_4358 at 24.274 kb on + strand, within EX28DRAFT_4358 at 24.274 kb on + strand, within EX28DRAFT_4358 at 24.275 kb on - strand, within EX28DRAFT_4358 at 24.275 kb on - strand, within EX28DRAFT_4358 at 24.275 kb on - strand, within EX28DRAFT_4358 at 24.545 kb on - strand, within EX28DRAFT_4358 at 24.613 kb on + strand, within EX28DRAFT_4358 at 24.614 kb on - strand, within EX28DRAFT_4358 at 24.651 kb on + strand, within EX28DRAFT_4358 at 24.651 kb on + strand, within EX28DRAFT_4358 at 24.651 kb on + strand, within EX28DRAFT_4358 at 24.652 kb on - strand, within EX28DRAFT_4358 at 24.652 kb on - strand, within EX28DRAFT_4358 at 24.652 kb on - strand, within EX28DRAFT_4358 at 25.232 kb on + strand, within EX28DRAFT_4359 at 25.233 kb on - strand, within EX28DRAFT_4359 at 25.233 kb on - strand, within EX28DRAFT_4359 at 25.246 kb on + strand, within EX28DRAFT_4359 at 25.506 kb on + strand, within EX28DRAFT_4359 at 25.694 kb on - strand at 25.707 kb on + strand at 25.707 kb on + strand at 25.707 kb on + strand at 25.707 kb on + strand at 25.708 kb on - strand at 26.099 kb on + strand, within EX28DRAFT_4360 at 26.100 kb on - strand, within EX28DRAFT_4360 at 26.100 kb on - strand, within EX28DRAFT_4360 at 26.103 kb on + strand, within EX28DRAFT_4360 at 26.110 kb on - strand, within EX28DRAFT_4360 at 26.347 kb on - strand, within EX28DRAFT_4360 at 26.347 kb on - strand, within EX28DRAFT_4360
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 23,851 + EX28DRAFT_4358 0.21 +0.1 23,898 + EX28DRAFT_4358 0.25 +0.1 23,898 + EX28DRAFT_4358 0.25 +1.3 23,899 - EX28DRAFT_4358 0.25 +0.2 23,899 - EX28DRAFT_4358 0.25 +1.3 24,139 + EX28DRAFT_4358 0.45 -0.5 24,274 + EX28DRAFT_4358 0.55 -0.1 24,274 + EX28DRAFT_4358 0.55 +1.5 24,275 - EX28DRAFT_4358 0.55 +0.0 24,275 - EX28DRAFT_4358 0.55 +0.3 24,275 - EX28DRAFT_4358 0.55 -0.1 24,545 - EX28DRAFT_4358 0.77 -0.2 24,613 + EX28DRAFT_4358 0.83 -0.5 24,614 - EX28DRAFT_4358 0.83 -0.1 24,651 + EX28DRAFT_4358 0.86 +0.1 24,651 + EX28DRAFT_4358 0.86 +0.1 24,651 + EX28DRAFT_4358 0.86 -1.3 24,652 - EX28DRAFT_4358 0.86 +0.2 24,652 - EX28DRAFT_4358 0.86 +0.4 24,652 - EX28DRAFT_4358 0.86 +0.4 25,232 + EX28DRAFT_4359 0.45 +0.7 25,233 - EX28DRAFT_4359 0.45 +0.5 25,233 - EX28DRAFT_4359 0.45 +0.7 25,246 + EX28DRAFT_4359 0.46 +0.3 25,506 + EX28DRAFT_4359 0.76 +0.7 25,694 - -0.1 25,707 + +0.2 25,707 + -0.6 25,707 + -0.1 25,707 + -0.3 25,708 - +0.4 26,099 + EX28DRAFT_4360 0.41 +0.7 26,100 - EX28DRAFT_4360 0.41 -0.1 26,100 - EX28DRAFT_4360 0.41 -1.0 26,103 + EX28DRAFT_4360 0.41 +0.3 26,110 - EX28DRAFT_4360 0.42 -0.0 26,347 - EX28DRAFT_4360 0.69 +0.1 26,347 - EX28DRAFT_4360 0.69 +1.4
Or see this region's nucleotide sequence