Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4261 and EX28DRAFT_4262 are separated by 184 nucleotides EX28DRAFT_4262 and EX28DRAFT_4263 are separated by 136 nucleotides
EX28DRAFT_4261: EX28DRAFT_4261 - NADPH:quinone reductase and related Zn-dependent oxidoreductases, at 66,324 to 67,307
_4261
EX28DRAFT_4262: EX28DRAFT_4262 - phage shock protein G, at 67,492 to 67,734
_4262
EX28DRAFT_4263: EX28DRAFT_4263 - tRNA dihydrouridine synthase A, at 67,871 to 68,865
_4263
Position (kb) 67
68 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 66.557 kb on + strand, within EX28DRAFT_4261 at 66.557 kb on + strand, within EX28DRAFT_4261 at 66.558 kb on - strand, within EX28DRAFT_4261 at 66.560 kb on + strand, within EX28DRAFT_4261 at 66.583 kb on - strand, within EX28DRAFT_4261 at 66.607 kb on - strand, within EX28DRAFT_4261 at 66.711 kb on + strand, within EX28DRAFT_4261 at 66.711 kb on + strand, within EX28DRAFT_4261 at 66.711 kb on + strand, within EX28DRAFT_4261 at 66.712 kb on - strand, within EX28DRAFT_4261 at 66.893 kb on + strand, within EX28DRAFT_4261 at 66.893 kb on + strand, within EX28DRAFT_4261 at 66.894 kb on - strand, within EX28DRAFT_4261 at 66.894 kb on - strand, within EX28DRAFT_4261 at 66.897 kb on + strand, within EX28DRAFT_4261 at 66.963 kb on + strand, within EX28DRAFT_4261 at 66.963 kb on + strand, within EX28DRAFT_4261 at 67.077 kb on - strand, within EX28DRAFT_4261 at 67.101 kb on + strand, within EX28DRAFT_4261 at 67.101 kb on + strand, within EX28DRAFT_4261 at 67.102 kb on - strand, within EX28DRAFT_4261 at 67.102 kb on - strand, within EX28DRAFT_4261 at 67.128 kb on + strand, within EX28DRAFT_4261 at 67.210 kb on + strand at 67.211 kb on - strand at 67.211 kb on - strand at 67.365 kb on + strand at 67.365 kb on + strand at 67.366 kb on - strand at 67.369 kb on + strand at 67.369 kb on + strand at 67.374 kb on + strand at 67.406 kb on - strand at 67.420 kb on + strand at 67.424 kb on + strand at 67.425 kb on - strand at 67.464 kb on - strand at 67.470 kb on - strand at 67.489 kb on - strand at 67.489 kb on - strand at 67.583 kb on - strand, within EX28DRAFT_4262 at 67.768 kb on - strand at 68.002 kb on + strand, within EX28DRAFT_4263 at 68.025 kb on + strand, within EX28DRAFT_4263 at 68.025 kb on + strand, within EX28DRAFT_4263 at 68.025 kb on + strand, within EX28DRAFT_4263 at 68.055 kb on + strand, within EX28DRAFT_4263 at 68.055 kb on + strand, within EX28DRAFT_4263 at 68.061 kb on + strand, within EX28DRAFT_4263 at 68.062 kb on - strand, within EX28DRAFT_4263 at 68.155 kb on - strand, within EX28DRAFT_4263 at 68.185 kb on + strand, within EX28DRAFT_4263 at 68.186 kb on - strand, within EX28DRAFT_4263 at 68.689 kb on - strand, within EX28DRAFT_4263 at 68.689 kb on - strand, within EX28DRAFT_4263 at 68.698 kb on - strand, within EX28DRAFT_4263
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 66,557 + EX28DRAFT_4261 0.24 -1.0 66,557 + EX28DRAFT_4261 0.24 -2.5 66,558 - EX28DRAFT_4261 0.24 -0.0 66,560 + EX28DRAFT_4261 0.24 +0.6 66,583 - EX28DRAFT_4261 0.26 -1.1 66,607 - EX28DRAFT_4261 0.29 +0.2 66,711 + EX28DRAFT_4261 0.39 -0.5 66,711 + EX28DRAFT_4261 0.39 -0.0 66,711 + EX28DRAFT_4261 0.39 -0.1 66,712 - EX28DRAFT_4261 0.39 -0.1 66,893 + EX28DRAFT_4261 0.58 -0.8 66,893 + EX28DRAFT_4261 0.58 -0.1 66,894 - EX28DRAFT_4261 0.58 +0.2 66,894 - EX28DRAFT_4261 0.58 +0.5 66,897 + EX28DRAFT_4261 0.58 -0.1 66,963 + EX28DRAFT_4261 0.65 +0.4 66,963 + EX28DRAFT_4261 0.65 +2.2 67,077 - EX28DRAFT_4261 0.77 +0.2 67,101 + EX28DRAFT_4261 0.79 -0.3 67,101 + EX28DRAFT_4261 0.79 -0.0 67,102 - EX28DRAFT_4261 0.79 +0.2 67,102 - EX28DRAFT_4261 0.79 -1.1 67,128 + EX28DRAFT_4261 0.82 +0.3 67,210 + -0.6 67,211 - +1.2 67,211 - -1.3 67,365 + -0.7 67,365 + -1.1 67,366 - -0.1 67,369 + -0.1 67,369 + +0.1 67,374 + -0.6 67,406 - +0.4 67,420 + -0.1 67,424 + -0.3 67,425 - -0.1 67,464 - +0.5 67,470 - -0.3 67,489 - +0.7 67,489 - -0.9 67,583 - EX28DRAFT_4262 0.37 +0.6 67,768 - +0.2 68,002 + EX28DRAFT_4263 0.13 +1.1 68,025 + EX28DRAFT_4263 0.15 +0.0 68,025 + EX28DRAFT_4263 0.15 -0.6 68,025 + EX28DRAFT_4263 0.15 -1.4 68,055 + EX28DRAFT_4263 0.18 -0.3 68,055 + EX28DRAFT_4263 0.18 +0.8 68,061 + EX28DRAFT_4263 0.19 -1.0 68,062 - EX28DRAFT_4263 0.19 -0.2 68,155 - EX28DRAFT_4263 0.29 -0.7 68,185 + EX28DRAFT_4263 0.32 +0.4 68,186 - EX28DRAFT_4263 0.32 -0.5 68,689 - EX28DRAFT_4263 0.82 +0.0 68,689 - EX28DRAFT_4263 0.82 +3.3 68,698 - EX28DRAFT_4263 0.83 -0.8
Or see this region's nucleotide sequence