Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_4154 and EX28DRAFT_4155 are separated by 67 nucleotides EX28DRAFT_4155 and EX28DRAFT_4156 are separated by 41 nucleotides EX28DRAFT_4156 and EX28DRAFT_4157 overlap by 8 nucleotides
EX28DRAFT_4154: EX28DRAFT_4154 - Uncharacterized protein conserved in bacteria, at 135,091 to 136,407
_4154
EX28DRAFT_4155: EX28DRAFT_4155 - DNA adenine methylase (dam), at 136,475 to 137,287
_4155
EX28DRAFT_4156: EX28DRAFT_4156 - ribulose-phosphate 3-epimerase, at 137,329 to 138,006
_4156
EX28DRAFT_4157: EX28DRAFT_4157 - 2-phosphoglycolate phosphatase, prokaryotic, at 137,999 to 138,760
_4157
Position (kb) 136
137
138 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 135.671 kb on + strand, within EX28DRAFT_4154 at 135.867 kb on + strand, within EX28DRAFT_4154 at 135.867 kb on + strand, within EX28DRAFT_4154 at 136.162 kb on + strand, within EX28DRAFT_4154 at 136.192 kb on + strand, within EX28DRAFT_4154 at 136.192 kb on + strand, within EX28DRAFT_4154 at 136.276 kb on + strand at 136.276 kb on + strand at 136.297 kb on + strand at 136.297 kb on + strand at 136.300 kb on - strand at 136.300 kb on - strand at 136.406 kb on - strand at 136.459 kb on + strand at 136.459 kb on + strand at 136.537 kb on + strand at 136.624 kb on + strand, within EX28DRAFT_4155 at 136.847 kb on + strand, within EX28DRAFT_4155 at 136.979 kb on - strand, within EX28DRAFT_4155 at 137.009 kb on + strand, within EX28DRAFT_4155 at 137.171 kb on - strand, within EX28DRAFT_4155 at 137.183 kb on + strand, within EX28DRAFT_4155 at 137.222 kb on - strand at 137.228 kb on - strand at 137.495 kb on + strand, within EX28DRAFT_4156 at 137.499 kb on + strand, within EX28DRAFT_4156 at 137.710 kb on + strand, within EX28DRAFT_4156 at 137.993 kb on + strand at 137.993 kb on + strand at 138.004 kb on + strand at 138.099 kb on - strand, within EX28DRAFT_4157 at 138.099 kb on - strand, within EX28DRAFT_4157 at 138.138 kb on + strand, within EX28DRAFT_4157 at 138.138 kb on + strand, within EX28DRAFT_4157 at 138.139 kb on - strand, within EX28DRAFT_4157 at 138.259 kb on + strand, within EX28DRAFT_4157
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 135,671 + EX28DRAFT_4154 0.44 -0.3 135,867 + EX28DRAFT_4154 0.59 -1.0 135,867 + EX28DRAFT_4154 0.59 -0.8 136,162 + EX28DRAFT_4154 0.81 +0.3 136,192 + EX28DRAFT_4154 0.84 +0.1 136,192 + EX28DRAFT_4154 0.84 +0.1 136,276 + +0.1 136,276 + +0.2 136,297 + +0.1 136,297 + +0.0 136,300 - -0.5 136,300 - -1.8 136,406 - -1.5 136,459 + -1.0 136,459 + +1.0 136,537 + -1.9 136,624 + EX28DRAFT_4155 0.18 -1.5 136,847 + EX28DRAFT_4155 0.46 -2.7 136,979 - EX28DRAFT_4155 0.62 -3.3 137,009 + EX28DRAFT_4155 0.66 -4.1 137,171 - EX28DRAFT_4155 0.86 -1.9 137,183 + EX28DRAFT_4155 0.87 -4.9 137,222 - -4.3 137,228 - -1.5 137,495 + EX28DRAFT_4156 0.24 +1.1 137,499 + EX28DRAFT_4156 0.25 -1.5 137,710 + EX28DRAFT_4156 0.56 -3.4 137,993 + -0.5 137,993 + +0.5 138,004 + +0.0 138,099 - EX28DRAFT_4157 0.13 +0.7 138,099 - EX28DRAFT_4157 0.13 -1.1 138,138 + EX28DRAFT_4157 0.18 +0.6 138,138 + EX28DRAFT_4157 0.18 +0.2 138,139 - EX28DRAFT_4157 0.18 +0.1 138,259 + EX28DRAFT_4157 0.34 +1.5
Or see this region's nucleotide sequence