Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3942 and EX28DRAFT_3943 are separated by 147 nucleotides EX28DRAFT_3943 and EX28DRAFT_3944 are separated by 48 nucleotides
EX28DRAFT_3942: EX28DRAFT_3942 - Maltoporin (phage lambda and maltose receptor), at 151,746 to 153,125
_3942
EX28DRAFT_3943: EX28DRAFT_3943 - Predicted permease, DMT superfamily, at 153,273 to 154,178
_3943
EX28DRAFT_3944: EX28DRAFT_3944 - Arabinose efflux permease, at 154,227 to 155,417
_3944
Position (kb) 153
154
155 Strain fitness (log2 ratio) -2
-1
0
1 at 152.494 kb on - strand, within EX28DRAFT_3942 at 152.551 kb on - strand, within EX28DRAFT_3942 at 152.559 kb on + strand, within EX28DRAFT_3942 at 152.671 kb on - strand, within EX28DRAFT_3942 at 152.727 kb on + strand, within EX28DRAFT_3942 at 152.727 kb on + strand, within EX28DRAFT_3942 at 152.749 kb on - strand, within EX28DRAFT_3942 at 152.778 kb on + strand, within EX28DRAFT_3942 at 152.779 kb on - strand, within EX28DRAFT_3942 at 152.838 kb on + strand, within EX28DRAFT_3942 at 152.839 kb on - strand, within EX28DRAFT_3942 at 152.919 kb on + strand, within EX28DRAFT_3942 at 152.969 kb on + strand, within EX28DRAFT_3942 at 152.970 kb on - strand, within EX28DRAFT_3942 at 153.015 kb on + strand at 153.015 kb on + strand at 153.123 kb on + strand at 153.231 kb on + strand at 153.231 kb on + strand at 153.231 kb on + strand at 153.232 kb on - strand at 153.232 kb on - strand at 153.232 kb on - strand at 153.351 kb on + strand at 153.351 kb on + strand at 153.352 kb on - strand at 153.352 kb on - strand at 153.786 kb on + strand, within EX28DRAFT_3943 at 153.795 kb on + strand, within EX28DRAFT_3943 at 153.796 kb on - strand, within EX28DRAFT_3943 at 153.796 kb on - strand, within EX28DRAFT_3943 at 153.939 kb on + strand, within EX28DRAFT_3943 at 153.940 kb on - strand, within EX28DRAFT_3943 at 153.978 kb on + strand, within EX28DRAFT_3943 at 153.978 kb on + strand, within EX28DRAFT_3943 at 154.228 kb on + strand at 154.472 kb on + strand, within EX28DRAFT_3944 at 154.473 kb on - strand, within EX28DRAFT_3944 at 154.499 kb on + strand, within EX28DRAFT_3944 at 154.608 kb on - strand, within EX28DRAFT_3944 at 154.682 kb on + strand, within EX28DRAFT_3944 at 154.683 kb on - strand, within EX28DRAFT_3944 at 154.699 kb on + strand, within EX28DRAFT_3944 at 154.700 kb on - strand, within EX28DRAFT_3944 at 154.700 kb on - strand, within EX28DRAFT_3944 at 154.704 kb on - strand, within EX28DRAFT_3944 at 154.733 kb on + strand, within EX28DRAFT_3944 at 154.733 kb on + strand, within EX28DRAFT_3944 at 154.733 kb on + strand, within EX28DRAFT_3944 at 154.733 kb on + strand, within EX28DRAFT_3944 at 154.733 kb on + strand, within EX28DRAFT_3944 at 154.734 kb on - strand, within EX28DRAFT_3944 at 154.734 kb on - strand, within EX28DRAFT_3944 at 154.796 kb on + strand, within EX28DRAFT_3944 at 155.145 kb on + strand, within EX28DRAFT_3944 at 155.145 kb on + strand, within EX28DRAFT_3944 at 155.146 kb on - strand, within EX28DRAFT_3944
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 152,494 - EX28DRAFT_3942 0.54 +0.0 152,551 - EX28DRAFT_3942 0.58 +0.4 152,559 + EX28DRAFT_3942 0.59 +0.3 152,671 - EX28DRAFT_3942 0.67 -0.1 152,727 + EX28DRAFT_3942 0.71 -0.5 152,727 + EX28DRAFT_3942 0.71 -0.2 152,749 - EX28DRAFT_3942 0.73 +0.9 152,778 + EX28DRAFT_3942 0.75 +0.4 152,779 - EX28DRAFT_3942 0.75 +0.2 152,838 + EX28DRAFT_3942 0.79 +0.2 152,839 - EX28DRAFT_3942 0.79 -1.0 152,919 + EX28DRAFT_3942 0.85 +0.6 152,969 + EX28DRAFT_3942 0.89 -1.2 152,970 - EX28DRAFT_3942 0.89 +0.2 153,015 + -0.1 153,015 + -0.1 153,123 + -0.5 153,231 + -2.0 153,231 + -0.2 153,231 + -0.3 153,232 - -0.4 153,232 - -0.1 153,232 - +1.0 153,351 + +0.2 153,351 + -0.3 153,352 - -0.3 153,352 - +0.3 153,786 + EX28DRAFT_3943 0.57 -0.1 153,795 + EX28DRAFT_3943 0.58 +0.2 153,796 - EX28DRAFT_3943 0.58 -0.1 153,796 - EX28DRAFT_3943 0.58 +0.3 153,939 + EX28DRAFT_3943 0.74 -1.5 153,940 - EX28DRAFT_3943 0.74 -0.3 153,978 + EX28DRAFT_3943 0.78 -0.3 153,978 + EX28DRAFT_3943 0.78 -2.2 154,228 + +0.2 154,472 + EX28DRAFT_3944 0.21 +0.7 154,473 - EX28DRAFT_3944 0.21 +1.5 154,499 + EX28DRAFT_3944 0.23 -0.5 154,608 - EX28DRAFT_3944 0.32 -0.0 154,682 + EX28DRAFT_3944 0.38 -0.4 154,683 - EX28DRAFT_3944 0.38 +0.4 154,699 + EX28DRAFT_3944 0.40 +0.3 154,700 - EX28DRAFT_3944 0.40 -0.0 154,700 - EX28DRAFT_3944 0.40 -0.1 154,704 - EX28DRAFT_3944 0.40 +0.5 154,733 + EX28DRAFT_3944 0.42 -0.8 154,733 + EX28DRAFT_3944 0.42 -0.1 154,733 + EX28DRAFT_3944 0.42 +0.3 154,733 + EX28DRAFT_3944 0.42 -0.7 154,733 + EX28DRAFT_3944 0.42 -0.7 154,734 - EX28DRAFT_3944 0.43 -0.7 154,734 - EX28DRAFT_3944 0.43 +0.3 154,796 + EX28DRAFT_3944 0.48 -0.3 155,145 + EX28DRAFT_3944 0.77 +1.7 155,145 + EX28DRAFT_3944 0.77 -0.3 155,146 - EX28DRAFT_3944 0.77 -0.7
Or see this region's nucleotide sequence