Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3744 and EX28DRAFT_3745 are separated by 79 nucleotides EX28DRAFT_3745 and EX28DRAFT_3746 are separated by 71 nucleotides EX28DRAFT_3746 and EX28DRAFT_3747 are separated by 27 nucleotides EX28DRAFT_3747 and EX28DRAFT_3748 overlap by 8 nucleotides
EX28DRAFT_3744: EX28DRAFT_3744 - Chloride channel protein EriC, at 423,788 to 425,188
_3744
EX28DRAFT_3745: EX28DRAFT_3745 - Iron-sulfur cluster assembly accessory protein, at 425,268 to 425,615
_3745
EX28DRAFT_3746: EX28DRAFT_3746 - Predicted membrane protein, at 425,687 to 426,310
_3746
EX28DRAFT_3747: EX28DRAFT_3747 - ABC-type Fe3+-hydroxamate transport system, periplasmic component, at 426,338 to 427,138
_3747
EX28DRAFT_3748: EX28DRAFT_3748 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase, at 427,131 to 427,829
_3748
Position (kb) 425
426
427 Strain fitness (log2 ratio) -2
-1
0
1
2 at 424.792 kb on + strand, within EX28DRAFT_3744 at 424.793 kb on - strand, within EX28DRAFT_3744 at 424.793 kb on - strand, within EX28DRAFT_3744 at 424.799 kb on - strand, within EX28DRAFT_3744 at 425.042 kb on + strand, within EX28DRAFT_3744 at 425.042 kb on + strand, within EX28DRAFT_3744 at 425.043 kb on - strand, within EX28DRAFT_3744 at 425.043 kb on - strand, within EX28DRAFT_3744 at 425.065 kb on - strand at 425.068 kb on + strand at 425.069 kb on - strand at 425.089 kb on - strand at 425.089 kb on - strand at 425.089 kb on - strand at 425.089 kb on - strand at 425.089 kb on - strand at 425.089 kb on - strand at 425.089 kb on - strand at 425.089 kb on - strand at 425.091 kb on + strand at 425.092 kb on - strand at 425.120 kb on + strand at 425.140 kb on + strand at 425.141 kb on - strand at 425.183 kb on - strand at 425.206 kb on + strand at 425.614 kb on - strand at 425.632 kb on - strand at 425.753 kb on + strand, within EX28DRAFT_3746 at 425.754 kb on - strand, within EX28DRAFT_3746 at 425.815 kb on - strand, within EX28DRAFT_3746 at 425.815 kb on - strand, within EX28DRAFT_3746 at 425.913 kb on - strand, within EX28DRAFT_3746 at 426.334 kb on + strand at 426.334 kb on + strand at 426.334 kb on + strand at 426.335 kb on - strand at 426.335 kb on - strand at 426.335 kb on - strand at 426.335 kb on - strand at 426.335 kb on - strand at 426.388 kb on + strand at 426.389 kb on - strand at 426.438 kb on - strand, within EX28DRAFT_3747 at 426.444 kb on - strand, within EX28DRAFT_3747 at 426.676 kb on + strand, within EX28DRAFT_3747 at 426.685 kb on + strand, within EX28DRAFT_3747 at 426.711 kb on + strand, within EX28DRAFT_3747 at 426.763 kb on + strand, within EX28DRAFT_3747 at 426.766 kb on - strand, within EX28DRAFT_3747 at 426.834 kb on - strand, within EX28DRAFT_3747 at 426.994 kb on + strand, within EX28DRAFT_3747 at 426.995 kb on - strand, within EX28DRAFT_3747 at 427.039 kb on + strand, within EX28DRAFT_3747 at 427.040 kb on - strand, within EX28DRAFT_3747 at 427.057 kb on + strand, within EX28DRAFT_3747 at 427.078 kb on - strand at 427.078 kb on - strand at 427.126 kb on + strand at 427.127 kb on - strand at 427.133 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 424,792 + EX28DRAFT_3744 0.72 +0.6 424,793 - EX28DRAFT_3744 0.72 -0.9 424,793 - EX28DRAFT_3744 0.72 -0.1 424,799 - EX28DRAFT_3744 0.72 -1.3 425,042 + EX28DRAFT_3744 0.90 +0.2 425,042 + EX28DRAFT_3744 0.90 +0.4 425,043 - EX28DRAFT_3744 0.90 -0.3 425,043 - EX28DRAFT_3744 0.90 +1.7 425,065 - -0.3 425,068 + -0.7 425,069 - +1.3 425,089 - -0.6 425,089 - -0.6 425,089 - -0.2 425,089 - +1.2 425,089 - -0.1 425,089 - +0.2 425,089 - +0.0 425,089 - +0.3 425,091 + -0.4 425,092 - +0.5 425,120 + +1.4 425,140 + +0.7 425,141 - +0.8 425,183 - +1.0 425,206 + +0.2 425,614 - -0.1 425,632 - -0.1 425,753 + EX28DRAFT_3746 0.11 +1.1 425,754 - EX28DRAFT_3746 0.11 +2.2 425,815 - EX28DRAFT_3746 0.21 +1.4 425,815 - EX28DRAFT_3746 0.21 +1.7 425,913 - EX28DRAFT_3746 0.36 +1.5 426,334 + +1.3 426,334 + +1.7 426,334 + +0.5 426,335 - -0.5 426,335 - -1.1 426,335 - -1.0 426,335 - -1.4 426,335 - -0.5 426,388 + +0.6 426,389 - -1.8 426,438 - EX28DRAFT_3747 0.12 -1.1 426,444 - EX28DRAFT_3747 0.13 -1.0 426,676 + EX28DRAFT_3747 0.42 +0.4 426,685 + EX28DRAFT_3747 0.43 +0.8 426,711 + EX28DRAFT_3747 0.47 +0.6 426,763 + EX28DRAFT_3747 0.53 +0.0 426,766 - EX28DRAFT_3747 0.53 +1.6 426,834 - EX28DRAFT_3747 0.62 +0.9 426,994 + EX28DRAFT_3747 0.82 -0.3 426,995 - EX28DRAFT_3747 0.82 +0.5 427,039 + EX28DRAFT_3747 0.88 +0.2 427,040 - EX28DRAFT_3747 0.88 +1.0 427,057 + EX28DRAFT_3747 0.90 +0.4 427,078 - +0.2 427,078 - -0.1 427,126 + +0.2 427,127 - +0.4 427,133 - -0.2
Or see this region's nucleotide sequence