Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3708 and EX28DRAFT_3709 are separated by 7 nucleotides EX28DRAFT_3709 and EX28DRAFT_3710 are separated by 3 nucleotides EX28DRAFT_3710 and EX28DRAFT_3711 are separated by 14 nucleotides
EX28DRAFT_3708: EX28DRAFT_3708 - Transcriptional regulators, at 379,359 to 380,123
_3708
EX28DRAFT_3709: EX28DRAFT_3709 - RNA, at 380,131 to 380,243
_3709
EX28DRAFT_3710: EX28DRAFT_3710 - pyruvate dehydrogenase E1 component, homodimeric type, at 380,247 to 382,910
_3710
EX28DRAFT_3711: EX28DRAFT_3711 - pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form, at 382,925 to 384,820
_3711
Position (kb) 380
381
382
383 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 379.288 kb on + strand at 379.390 kb on + strand at 379.923 kb on + strand, within EX28DRAFT_3708 at 380.138 kb on + strand at 380.424 kb on + strand at 380.424 kb on + strand at 380.856 kb on + strand, within EX28DRAFT_3710 at 381.244 kb on - strand, within EX28DRAFT_3710 at 381.505 kb on - strand, within EX28DRAFT_3710 at 381.561 kb on + strand, within EX28DRAFT_3710 at 381.562 kb on - strand, within EX28DRAFT_3710 at 381.861 kb on + strand, within EX28DRAFT_3710 at 381.913 kb on - strand, within EX28DRAFT_3710 at 381.915 kb on + strand, within EX28DRAFT_3710 at 382.044 kb on + strand, within EX28DRAFT_3710 at 382.282 kb on - strand, within EX28DRAFT_3710 at 382.305 kb on + strand, within EX28DRAFT_3710 at 382.306 kb on - strand, within EX28DRAFT_3710 at 382.312 kb on - strand, within EX28DRAFT_3710 at 382.312 kb on - strand, within EX28DRAFT_3710 at 382.463 kb on - strand, within EX28DRAFT_3710 at 382.515 kb on + strand, within EX28DRAFT_3710 at 382.657 kb on - strand at 382.658 kb on + strand at 382.909 kb on - strand at 383.428 kb on - strand, within EX28DRAFT_3711 at 383.900 kb on + strand, within EX28DRAFT_3711
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 379,288 + +0.4 379,390 + -0.8 379,923 + EX28DRAFT_3708 0.74 +0.7 380,138 + +0.6 380,424 + -2.5 380,424 + -1.9 380,856 + EX28DRAFT_3710 0.23 -3.2 381,244 - EX28DRAFT_3710 0.37 +0.3 381,505 - EX28DRAFT_3710 0.47 -3.0 381,561 + EX28DRAFT_3710 0.49 -3.3 381,562 - EX28DRAFT_3710 0.49 -2.7 381,861 + EX28DRAFT_3710 0.61 -0.8 381,913 - EX28DRAFT_3710 0.63 -3.5 381,915 + EX28DRAFT_3710 0.63 -0.2 382,044 + EX28DRAFT_3710 0.67 -2.1 382,282 - EX28DRAFT_3710 0.76 -3.2 382,305 + EX28DRAFT_3710 0.77 -3.2 382,306 - EX28DRAFT_3710 0.77 -2.7 382,312 - EX28DRAFT_3710 0.78 -1.4 382,312 - EX28DRAFT_3710 0.78 -0.0 382,463 - EX28DRAFT_3710 0.83 -1.4 382,515 + EX28DRAFT_3710 0.85 -2.3 382,657 - -1.2 382,658 + -2.2 382,909 - +1.1 383,428 - EX28DRAFT_3711 0.27 +1.1 383,900 + EX28DRAFT_3711 0.51 -3.4
Or see this region's nucleotide sequence