Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3150 and EX28DRAFT_3151 are separated by 34 nucleotides EX28DRAFT_3151 and EX28DRAFT_3152 are separated by 178 nucleotides
EX28DRAFT_3150: EX28DRAFT_3150 - Transcriptional regulator, contains sigma factor-related N-terminal domain, at 450,729 to 451,697
_3150
EX28DRAFT_3151: EX28DRAFT_3151 - Sugar (pentulose and hexulose) kinases, at 451,732 to 453,327
_3151
EX28DRAFT_3152: EX28DRAFT_3152 - NADH:flavin oxidoreductases, Old Yellow Enzyme family, at 453,506 to 455,527
_3152
Position (kb) 451
452
453
454 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 450.820 kb on - strand at 450.974 kb on - strand, within EX28DRAFT_3150 at 451.022 kb on + strand, within EX28DRAFT_3150 at 451.207 kb on - strand, within EX28DRAFT_3150 at 451.209 kb on - strand, within EX28DRAFT_3150 at 451.301 kb on - strand, within EX28DRAFT_3150 at 451.417 kb on - strand, within EX28DRAFT_3150 at 451.419 kb on - strand, within EX28DRAFT_3150 at 451.419 kb on - strand, within EX28DRAFT_3150 at 451.444 kb on - strand, within EX28DRAFT_3150 at 451.696 kb on - strand at 451.745 kb on + strand at 451.746 kb on - strand at 451.751 kb on + strand at 451.997 kb on - strand, within EX28DRAFT_3151 at 451.997 kb on - strand, within EX28DRAFT_3151 at 452.107 kb on + strand, within EX28DRAFT_3151 at 452.186 kb on - strand, within EX28DRAFT_3151 at 452.350 kb on - strand, within EX28DRAFT_3151 at 452.722 kb on + strand, within EX28DRAFT_3151 at 452.723 kb on - strand, within EX28DRAFT_3151 at 452.783 kb on + strand, within EX28DRAFT_3151 at 452.784 kb on - strand, within EX28DRAFT_3151 at 452.805 kb on + strand, within EX28DRAFT_3151 at 452.806 kb on - strand, within EX28DRAFT_3151 at 452.816 kb on - strand, within EX28DRAFT_3151 at 452.835 kb on + strand, within EX28DRAFT_3151 at 452.835 kb on + strand, within EX28DRAFT_3151 at 453.056 kb on + strand, within EX28DRAFT_3151 at 453.194 kb on - strand at 453.226 kb on + strand at 453.227 kb on - strand at 453.341 kb on + strand at 453.341 kb on + strand at 453.342 kb on - strand at 453.342 kb on - strand at 453.342 kb on - strand at 453.396 kb on + strand at 453.461 kb on + strand at 453.461 kb on + strand at 453.490 kb on + strand at 453.505 kb on + strand at 453.505 kb on + strand at 453.506 kb on - strand at 453.506 kb on - strand at 453.506 kb on - strand at 453.638 kb on + strand at 453.638 kb on + strand at 453.639 kb on - strand at 453.639 kb on - strand at 453.837 kb on - strand, within EX28DRAFT_3152 at 454.007 kb on + strand, within EX28DRAFT_3152 at 454.070 kb on + strand, within EX28DRAFT_3152 at 454.138 kb on + strand, within EX28DRAFT_3152
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 450,820 - -0.2 450,974 - EX28DRAFT_3150 0.25 +0.2 451,022 + EX28DRAFT_3150 0.30 +0.1 451,207 - EX28DRAFT_3150 0.49 -0.3 451,209 - EX28DRAFT_3150 0.50 -2.5 451,301 - EX28DRAFT_3150 0.59 +0.1 451,417 - EX28DRAFT_3150 0.71 +0.2 451,419 - EX28DRAFT_3150 0.71 -1.4 451,419 - EX28DRAFT_3150 0.71 -0.1 451,444 - EX28DRAFT_3150 0.74 +0.6 451,696 - +0.4 451,745 + +0.2 451,746 - +0.6 451,751 + -0.1 451,997 - EX28DRAFT_3151 0.17 +0.9 451,997 - EX28DRAFT_3151 0.17 +1.2 452,107 + EX28DRAFT_3151 0.23 -0.2 452,186 - EX28DRAFT_3151 0.28 +0.8 452,350 - EX28DRAFT_3151 0.39 -0.1 452,722 + EX28DRAFT_3151 0.62 -1.0 452,723 - EX28DRAFT_3151 0.62 +0.6 452,783 + EX28DRAFT_3151 0.66 +0.1 452,784 - EX28DRAFT_3151 0.66 +0.6 452,805 + EX28DRAFT_3151 0.67 -0.6 452,806 - EX28DRAFT_3151 0.67 -0.2 452,816 - EX28DRAFT_3151 0.68 +3.9 452,835 + EX28DRAFT_3151 0.69 +0.3 452,835 + EX28DRAFT_3151 0.69 +0.3 453,056 + EX28DRAFT_3151 0.83 +0.1 453,194 - -0.1 453,226 + +0.2 453,227 - +0.2 453,341 + +0.2 453,341 + -0.5 453,342 - +1.3 453,342 - +0.1 453,342 - +0.7 453,396 + +0.1 453,461 + +0.0 453,461 + -2.1 453,490 + -0.0 453,505 + -0.2 453,505 + +0.6 453,506 - -0.3 453,506 - +0.5 453,506 - -0.5 453,638 + +0.2 453,638 + +0.1 453,639 - -0.4 453,639 - +0.1 453,837 - EX28DRAFT_3152 0.16 -0.1 454,007 + EX28DRAFT_3152 0.25 -0.0 454,070 + EX28DRAFT_3152 0.28 +0.1 454,138 + EX28DRAFT_3152 0.31 +0.7
Or see this region's nucleotide sequence