Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_3076

Experiment: MS_media with m-arsenite 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_3075 and EX28DRAFT_3076 are separated by 96 nucleotidesEX28DRAFT_3076 and EX28DRAFT_3077 are separated by 196 nucleotides EX28DRAFT_3075: EX28DRAFT_3075 - Glutathionylspermidine synthase, at 385,404 to 386,564 _3075 EX28DRAFT_3076: EX28DRAFT_3076 - Uncharacterized conserved protein, at 386,661 to 387,449 _3076 EX28DRAFT_3077: EX28DRAFT_3077 - Predicted divalent heavy-metal cations transporter, at 387,646 to 388,419 _3077 Position (kb) 386 387 388Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 385.695 kb on + strand, within EX28DRAFT_3075at 385.696 kb on - strand, within EX28DRAFT_3075at 385.751 kb on + strand, within EX28DRAFT_3075at 385.974 kb on + strand, within EX28DRAFT_3075at 386.022 kb on + strand, within EX28DRAFT_3075at 386.116 kb on - strand, within EX28DRAFT_3075at 386.116 kb on - strand, within EX28DRAFT_3075at 386.116 kb on - strand, within EX28DRAFT_3075at 386.116 kb on - strand, within EX28DRAFT_3075at 386.198 kb on + strand, within EX28DRAFT_3075at 386.262 kb on + strand, within EX28DRAFT_3075at 386.298 kb on + strand, within EX28DRAFT_3075at 386.299 kb on - strand, within EX28DRAFT_3075at 386.299 kb on - strand, within EX28DRAFT_3075at 386.299 kb on - strand, within EX28DRAFT_3075at 386.299 kb on - strand, within EX28DRAFT_3075at 386.418 kb on + strand, within EX28DRAFT_3075at 386.419 kb on - strand, within EX28DRAFT_3075at 386.445 kb on + strand, within EX28DRAFT_3075at 386.445 kb on + strand, within EX28DRAFT_3075at 386.445 kb on + strand, within EX28DRAFT_3075at 386.445 kb on + strand, within EX28DRAFT_3075at 386.445 kb on + strand, within EX28DRAFT_3075at 386.445 kb on + strand, within EX28DRAFT_3075at 386.445 kb on + strand, within EX28DRAFT_3075at 386.446 kb on - strand, within EX28DRAFT_3075at 386.446 kb on - strand, within EX28DRAFT_3075at 386.447 kb on + strand, within EX28DRAFT_3075at 386.447 kb on + strand, within EX28DRAFT_3075at 386.448 kb on - strand, within EX28DRAFT_3075at 386.659 kb on + strandat 386.660 kb on - strandat 386.684 kb on + strandat 386.684 kb on + strandat 386.758 kb on + strand, within EX28DRAFT_3076at 386.759 kb on - strand, within EX28DRAFT_3076at 386.821 kb on + strand, within EX28DRAFT_3076at 386.821 kb on + strand, within EX28DRAFT_3076at 386.821 kb on + strand, within EX28DRAFT_3076at 386.822 kb on - strand, within EX28DRAFT_3076at 386.822 kb on - strand, within EX28DRAFT_3076at 386.822 kb on - strand, within EX28DRAFT_3076at 386.879 kb on - strand, within EX28DRAFT_3076at 387.005 kb on + strand, within EX28DRAFT_3076at 387.006 kb on - strand, within EX28DRAFT_3076at 387.086 kb on - strand, within EX28DRAFT_3076at 387.092 kb on + strand, within EX28DRAFT_3076at 387.171 kb on + strand, within EX28DRAFT_3076at 387.402 kb on - strandat 387.462 kb on - strandat 387.462 kb on - strandat 387.478 kb on + strandat 387.487 kb on + strandat 387.487 kb on + strandat 387.488 kb on - strandat 387.488 kb on - strandat 387.613 kb on - strandat 387.616 kb on - strandat 387.878 kb on - strand, within EX28DRAFT_3077at 387.957 kb on + strand, within EX28DRAFT_3077at 388.002 kb on + strand, within EX28DRAFT_3077at 388.027 kb on + strand, within EX28DRAFT_3077at 388.027 kb on + strand, within EX28DRAFT_3077at 388.028 kb on - strand, within EX28DRAFT_3077at 388.028 kb on - strand, within EX28DRAFT_3077at 388.093 kb on - strand, within EX28DRAFT_3077at 388.332 kb on + strand, within EX28DRAFT_3077at 388.333 kb on - strand, within EX28DRAFT_3077at 388.335 kb on + strand, within EX28DRAFT_3077at 388.335 kb on + strand, within EX28DRAFT_3077at 388.335 kb on + strand, within EX28DRAFT_3077at 388.349 kb on - strandat 388.448 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM
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385,695 + EX28DRAFT_3075 0.25 +0.0
385,696 - EX28DRAFT_3075 0.25 +0.3
385,751 + EX28DRAFT_3075 0.30 -0.6
385,974 + EX28DRAFT_3075 0.49 +0.1
386,022 + EX28DRAFT_3075 0.53 -0.3
386,116 - EX28DRAFT_3075 0.61 +0.6
386,116 - EX28DRAFT_3075 0.61 -0.9
386,116 - EX28DRAFT_3075 0.61 +1.0
386,116 - EX28DRAFT_3075 0.61 +0.3
386,198 + EX28DRAFT_3075 0.68 +0.8
386,262 + EX28DRAFT_3075 0.74 -0.4
386,298 + EX28DRAFT_3075 0.77 -0.5
386,299 - EX28DRAFT_3075 0.77 -0.2
386,299 - EX28DRAFT_3075 0.77 +0.0
386,299 - EX28DRAFT_3075 0.77 -1.1
386,299 - EX28DRAFT_3075 0.77 -0.1
386,418 + EX28DRAFT_3075 0.87 +0.1
386,419 - EX28DRAFT_3075 0.87 -0.2
386,445 + EX28DRAFT_3075 0.90 -0.4
386,445 + EX28DRAFT_3075 0.90 -0.6
386,445 + EX28DRAFT_3075 0.90 -0.4
386,445 + EX28DRAFT_3075 0.90 -0.9
386,445 + EX28DRAFT_3075 0.90 -0.2
386,445 + EX28DRAFT_3075 0.90 -0.4
386,445 + EX28DRAFT_3075 0.90 -0.1
386,446 - EX28DRAFT_3075 0.90 -0.8
386,446 - EX28DRAFT_3075 0.90 -0.3
386,447 + EX28DRAFT_3075 0.90 -0.8
386,447 + EX28DRAFT_3075 0.90 -0.7
386,448 - EX28DRAFT_3075 0.90 +0.2
386,659 + -0.1
386,660 - +0.3
386,684 + -0.9
386,684 + -4.5
386,758 + EX28DRAFT_3076 0.12 +0.2
386,759 - EX28DRAFT_3076 0.12 -0.4
386,821 + EX28DRAFT_3076 0.20 +0.2
386,821 + EX28DRAFT_3076 0.20 +0.3
386,821 + EX28DRAFT_3076 0.20 -2.2
386,822 - EX28DRAFT_3076 0.20 -0.1
386,822 - EX28DRAFT_3076 0.20 +0.3
386,822 - EX28DRAFT_3076 0.20 -0.2
386,879 - EX28DRAFT_3076 0.28 -0.2
387,005 + EX28DRAFT_3076 0.44 -0.3
387,006 - EX28DRAFT_3076 0.44 +0.1
387,086 - EX28DRAFT_3076 0.54 -0.4
387,092 + EX28DRAFT_3076 0.55 -1.3
387,171 + EX28DRAFT_3076 0.65 -0.8
387,402 - +0.6
387,462 - +0.5
387,462 - -0.8
387,478 + -1.4
387,487 + +0.8
387,487 + +0.2
387,488 - -3.5
387,488 - -0.9
387,613 - +0.5
387,616 - -0.2
387,878 - EX28DRAFT_3077 0.30 -0.5
387,957 + EX28DRAFT_3077 0.40 -0.3
388,002 + EX28DRAFT_3077 0.46 -0.4
388,027 + EX28DRAFT_3077 0.49 +0.0
388,027 + EX28DRAFT_3077 0.49 -0.4
388,028 - EX28DRAFT_3077 0.49 +0.5
388,028 - EX28DRAFT_3077 0.49 +2.2
388,093 - EX28DRAFT_3077 0.58 +0.3
388,332 + EX28DRAFT_3077 0.89 -0.5
388,333 - EX28DRAFT_3077 0.89 +0.1
388,335 + EX28DRAFT_3077 0.89 -0.1
388,335 + EX28DRAFT_3077 0.89 -1.2
388,335 + EX28DRAFT_3077 0.89 -1.8
388,349 - -0.9
388,448 - -1.0

Or see this region's nucleotide sequence