Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_3046 and EX28DRAFT_3047 are separated by 143 nucleotides EX28DRAFT_3047 and EX28DRAFT_3048 are separated by 39 nucleotides EX28DRAFT_3048 and EX28DRAFT_3049 are separated by 195 nucleotides
EX28DRAFT_3046: EX28DRAFT_3046 - cystathionine beta-lyase, bacterial, at 353,058 to 354,245
_3046
EX28DRAFT_3047: EX28DRAFT_3047 - Uncharacterized membrane-associated protein, at 354,389 to 355,048
_3047
EX28DRAFT_3048: EX28DRAFT_3048 - AraC-type DNA-binding domain-containing proteins, at 355,088 to 355,987
_3048
EX28DRAFT_3049: EX28DRAFT_3049 - Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family, at 356,183 to 357,346
_3049
Position (kb) 355
356 Strain fitness (log2 ratio) -1
0
1
2 at 354.362 kb on + strand at 354.362 kb on + strand at 354.363 kb on - strand at 354.364 kb on + strand at 354.364 kb on + strand at 354.364 kb on + strand at 354.365 kb on - strand at 354.365 kb on - strand at 354.365 kb on - strand at 354.365 kb on - strand at 354.406 kb on + strand at 354.647 kb on + strand, within EX28DRAFT_3047 at 354.647 kb on + strand, within EX28DRAFT_3047 at 354.716 kb on + strand, within EX28DRAFT_3047 at 354.717 kb on - strand, within EX28DRAFT_3047 at 354.717 kb on - strand, within EX28DRAFT_3047 at 354.917 kb on - strand, within EX28DRAFT_3047 at 355.035 kb on - strand at 355.089 kb on + strand at 355.089 kb on + strand at 355.146 kb on + strand at 355.147 kb on - strand at 355.250 kb on - strand, within EX28DRAFT_3048 at 355.250 kb on - strand, within EX28DRAFT_3048 at 355.268 kb on - strand, within EX28DRAFT_3048 at 355.268 kb on - strand, within EX28DRAFT_3048 at 355.309 kb on + strand, within EX28DRAFT_3048 at 355.597 kb on + strand, within EX28DRAFT_3048 at 355.598 kb on - strand, within EX28DRAFT_3048 at 355.748 kb on + strand, within EX28DRAFT_3048 at 355.764 kb on + strand, within EX28DRAFT_3048 at 355.802 kb on - strand, within EX28DRAFT_3048 at 355.803 kb on + strand, within EX28DRAFT_3048 at 355.988 kb on - strand at 356.195 kb on - strand at 356.288 kb on + strand at 356.510 kb on + strand, within EX28DRAFT_3049 at 356.563 kb on + strand, within EX28DRAFT_3049 at 356.724 kb on - strand, within EX28DRAFT_3049 at 356.776 kb on + strand, within EX28DRAFT_3049 at 356.790 kb on - strand, within EX28DRAFT_3049 at 356.790 kb on - strand, within EX28DRAFT_3049 at 356.799 kb on - strand, within EX28DRAFT_3049 at 356.913 kb on + strand, within EX28DRAFT_3049 at 356.914 kb on - strand, within EX28DRAFT_3049 at 356.914 kb on - strand, within EX28DRAFT_3049 at 356.914 kb on - strand, within EX28DRAFT_3049 at 356.914 kb on - strand, within EX28DRAFT_3049
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 354,362 + -0.9 354,362 + -0.2 354,363 - -0.6 354,364 + -1.5 354,364 + -1.2 354,364 + -1.0 354,365 - -1.0 354,365 - +0.6 354,365 - -0.9 354,365 - -0.4 354,406 + -0.5 354,647 + EX28DRAFT_3047 0.39 -1.7 354,647 + EX28DRAFT_3047 0.39 +0.0 354,716 + EX28DRAFT_3047 0.50 +0.0 354,717 - EX28DRAFT_3047 0.50 -0.3 354,717 - EX28DRAFT_3047 0.50 -0.0 354,917 - EX28DRAFT_3047 0.80 +0.0 355,035 - +0.2 355,089 + +0.1 355,089 + +0.5 355,146 + -0.6 355,147 - -0.1 355,250 - EX28DRAFT_3048 0.18 -0.4 355,250 - EX28DRAFT_3048 0.18 -0.4 355,268 - EX28DRAFT_3048 0.20 +0.7 355,268 - EX28DRAFT_3048 0.20 +1.2 355,309 + EX28DRAFT_3048 0.25 +2.5 355,597 + EX28DRAFT_3048 0.57 +1.0 355,598 - EX28DRAFT_3048 0.57 -1.1 355,748 + EX28DRAFT_3048 0.73 +0.1 355,764 + EX28DRAFT_3048 0.75 +0.2 355,802 - EX28DRAFT_3048 0.79 -0.0 355,803 + EX28DRAFT_3048 0.79 +0.2 355,988 - -1.1 356,195 - -0.3 356,288 + -0.0 356,510 + EX28DRAFT_3049 0.28 -0.6 356,563 + EX28DRAFT_3049 0.33 +0.5 356,724 - EX28DRAFT_3049 0.46 +0.1 356,776 + EX28DRAFT_3049 0.51 -0.2 356,790 - EX28DRAFT_3049 0.52 +0.0 356,790 - EX28DRAFT_3049 0.52 +0.1 356,799 - EX28DRAFT_3049 0.53 -0.5 356,913 + EX28DRAFT_3049 0.63 +0.2 356,914 - EX28DRAFT_3049 0.63 -0.3 356,914 - EX28DRAFT_3049 0.63 -0.1 356,914 - EX28DRAFT_3049 0.63 +0.3 356,914 - EX28DRAFT_3049 0.63 +0.2
Or see this region's nucleotide sequence