Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2886 and EX28DRAFT_2887 overlap by 1 nucleotides EX28DRAFT_2887 and EX28DRAFT_2888 overlap by 10 nucleotides EX28DRAFT_2888 and EX28DRAFT_2889 are separated by 75 nucleotides
EX28DRAFT_2886: EX28DRAFT_2886 - cysteine desulfurase, catalytic subunit CsdA, at 191,473 to 192,678
_2886
EX28DRAFT_2887: EX28DRAFT_2887 - cysteine desulfurase, sulfur acceptor subunit CsdE, at 192,678 to 193,124
_2887
EX28DRAFT_2888: EX28DRAFT_2888 - Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1, at 193,115 to 193,921
_2888
EX28DRAFT_2889: EX28DRAFT_2889 - Membrane-bound lytic murein transglycosylase, at 193,997 to 195,094
_2889
Position (kb) 192
193
194 Strain fitness (log2 ratio) -2
-1
0
1 at 191.757 kb on + strand, within EX28DRAFT_2886 at 191.757 kb on + strand, within EX28DRAFT_2886 at 192.119 kb on - strand, within EX28DRAFT_2886 at 192.135 kb on + strand, within EX28DRAFT_2886 at 192.135 kb on + strand, within EX28DRAFT_2886 at 192.135 kb on + strand, within EX28DRAFT_2886 at 192.136 kb on - strand, within EX28DRAFT_2886 at 192.136 kb on - strand, within EX28DRAFT_2886 at 192.610 kb on - strand at 192.612 kb on + strand at 192.665 kb on + strand at 192.666 kb on - strand at 192.684 kb on - strand at 192.737 kb on - strand, within EX28DRAFT_2887 at 192.773 kb on + strand, within EX28DRAFT_2887 at 192.774 kb on - strand, within EX28DRAFT_2887 at 192.777 kb on + strand, within EX28DRAFT_2887 at 192.850 kb on + strand, within EX28DRAFT_2887 at 192.851 kb on - strand, within EX28DRAFT_2887 at 192.851 kb on - strand, within EX28DRAFT_2887 at 193.551 kb on + strand, within EX28DRAFT_2888 at 193.551 kb on + strand, within EX28DRAFT_2888 at 193.552 kb on - strand, within EX28DRAFT_2888 at 193.557 kb on + strand, within EX28DRAFT_2888 at 193.558 kb on - strand, within EX28DRAFT_2888 at 193.558 kb on - strand, within EX28DRAFT_2888 at 193.574 kb on - strand, within EX28DRAFT_2888 at 193.751 kb on - strand, within EX28DRAFT_2888 at 193.865 kb on + strand at 193.866 kb on - strand at 193.922 kb on - strand at 193.922 kb on - strand at 193.935 kb on + strand at 193.935 kb on + strand at 193.935 kb on + strand at 193.936 kb on - strand at 193.936 kb on - strand at 193.968 kb on + strand at 193.969 kb on - strand at 193.969 kb on - strand at 194.064 kb on + strand at 194.064 kb on + strand at 194.065 kb on - strand at 194.098 kb on + strand at 194.106 kb on + strand at 194.106 kb on + strand at 194.107 kb on - strand, within EX28DRAFT_2889 at 194.107 kb on - strand, within EX28DRAFT_2889
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 191,757 + EX28DRAFT_2886 0.24 -0.4 191,757 + EX28DRAFT_2886 0.24 +0.4 192,119 - EX28DRAFT_2886 0.54 +0.3 192,135 + EX28DRAFT_2886 0.55 -0.9 192,135 + EX28DRAFT_2886 0.55 -0.6 192,135 + EX28DRAFT_2886 0.55 +0.2 192,136 - EX28DRAFT_2886 0.55 +0.8 192,136 - EX28DRAFT_2886 0.55 -0.3 192,610 - +0.4 192,612 + -0.4 192,665 + +1.6 192,666 - +0.8 192,684 - +0.3 192,737 - EX28DRAFT_2887 0.13 +0.5 192,773 + EX28DRAFT_2887 0.21 -0.1 192,774 - EX28DRAFT_2887 0.21 +0.7 192,777 + EX28DRAFT_2887 0.22 +0.8 192,850 + EX28DRAFT_2887 0.38 +0.4 192,851 - EX28DRAFT_2887 0.39 +0.5 192,851 - EX28DRAFT_2887 0.39 +0.4 193,551 + EX28DRAFT_2888 0.54 -0.6 193,551 + EX28DRAFT_2888 0.54 +0.0 193,552 - EX28DRAFT_2888 0.54 -0.4 193,557 + EX28DRAFT_2888 0.55 +0.0 193,558 - EX28DRAFT_2888 0.55 -0.4 193,558 - EX28DRAFT_2888 0.55 -1.2 193,574 - EX28DRAFT_2888 0.57 -0.4 193,751 - EX28DRAFT_2888 0.79 -1.8 193,865 + +0.1 193,866 - +0.2 193,922 - +0.1 193,922 - +0.3 193,935 + -0.8 193,935 + -1.1 193,935 + +0.1 193,936 - -0.0 193,936 - -0.3 193,968 + +0.1 193,969 - +0.9 193,969 - +0.6 194,064 + -0.4 194,064 + -0.9 194,065 - +0.1 194,098 + +0.3 194,106 + +0.2 194,106 + +0.5 194,107 - EX28DRAFT_2889 0.10 +0.1 194,107 - EX28DRAFT_2889 0.10 +0.7
Or see this region's nucleotide sequence