Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2650 and EX28DRAFT_2651 are separated by 11 nucleotides EX28DRAFT_2651 and EX28DRAFT_2652 are separated by 304 nucleotides
EX28DRAFT_2650: EX28DRAFT_2650 - glutamate-5-semialdehyde dehydrogenase (EC 1.2.1.41), at 2,687,094 to 2,688,347
_2650
EX28DRAFT_2651: EX28DRAFT_2651 - glutamate 5-kinase, at 2,688,359 to 2,689,462
_2651
EX28DRAFT_2652: EX28DRAFT_2652 - Outer membrane protein (porin), at 2,689,767 to 2,690,819
_2652
Position (kb)
2688
2689
2690 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2687.436 kb on + strand, within EX28DRAFT_2650 at 2687.580 kb on + strand, within EX28DRAFT_2650 at 2687.588 kb on + strand, within EX28DRAFT_2650 at 2687.625 kb on - strand, within EX28DRAFT_2650 at 2687.771 kb on - strand, within EX28DRAFT_2650 at 2687.829 kb on + strand, within EX28DRAFT_2650 at 2687.928 kb on - strand, within EX28DRAFT_2650 at 2687.992 kb on + strand, within EX28DRAFT_2650 at 2687.992 kb on + strand, within EX28DRAFT_2650 at 2687.992 kb on + strand, within EX28DRAFT_2650 at 2687.993 kb on - strand, within EX28DRAFT_2650 at 2688.403 kb on - strand at 2688.483 kb on - strand, within EX28DRAFT_2651 at 2689.182 kb on + strand, within EX28DRAFT_2651 at 2689.182 kb on + strand, within EX28DRAFT_2651 at 2689.183 kb on - strand, within EX28DRAFT_2651 at 2689.331 kb on - strand, within EX28DRAFT_2651 at 2689.331 kb on - strand, within EX28DRAFT_2651 at 2689.331 kb on - strand, within EX28DRAFT_2651 at 2689.368 kb on - strand at 2689.368 kb on - strand at 2689.543 kb on + strand at 2689.544 kb on - strand at 2689.649 kb on - strand at 2689.750 kb on - strand at 2689.839 kb on + strand at 2689.839 kb on + strand at 2689.841 kb on + strand at 2689.853 kb on + strand at 2689.857 kb on - strand at 2689.857 kb on - strand at 2689.870 kb on - strand at 2689.893 kb on + strand, within EX28DRAFT_2652 at 2689.893 kb on + strand, within EX28DRAFT_2652 at 2689.894 kb on - strand, within EX28DRAFT_2652 at 2689.894 kb on - strand, within EX28DRAFT_2652 at 2689.932 kb on + strand, within EX28DRAFT_2652 at 2689.933 kb on - strand, within EX28DRAFT_2652 at 2689.933 kb on - strand, within EX28DRAFT_2652 at 2690.016 kb on - strand, within EX28DRAFT_2652 at 2690.144 kb on + strand, within EX28DRAFT_2652 at 2690.145 kb on - strand, within EX28DRAFT_2652 at 2690.277 kb on + strand, within EX28DRAFT_2652 at 2690.278 kb on - strand, within EX28DRAFT_2652 at 2690.346 kb on + strand, within EX28DRAFT_2652 at 2690.346 kb on + strand, within EX28DRAFT_2652 at 2690.347 kb on - strand, within EX28DRAFT_2652
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 2,687,436 + EX28DRAFT_2650 0.27 -1.3 2,687,580 + EX28DRAFT_2650 0.39 -2.4 2,687,588 + EX28DRAFT_2650 0.39 -2.9 2,687,625 - EX28DRAFT_2650 0.42 +0.4 2,687,771 - EX28DRAFT_2650 0.54 -1.2 2,687,829 + EX28DRAFT_2650 0.59 -1.1 2,687,928 - EX28DRAFT_2650 0.67 +2.0 2,687,992 + EX28DRAFT_2650 0.72 -4.6 2,687,992 + EX28DRAFT_2650 0.72 -0.8 2,687,992 + EX28DRAFT_2650 0.72 -2.9 2,687,993 - EX28DRAFT_2650 0.72 -0.8 2,688,403 - -4.4 2,688,483 - EX28DRAFT_2651 0.11 -2.2 2,689,182 + EX28DRAFT_2651 0.75 -2.8 2,689,182 + EX28DRAFT_2651 0.75 -2.4 2,689,183 - EX28DRAFT_2651 0.75 -2.8 2,689,331 - EX28DRAFT_2651 0.88 -1.6 2,689,331 - EX28DRAFT_2651 0.88 -2.2 2,689,331 - EX28DRAFT_2651 0.88 -4.2 2,689,368 - -0.8 2,689,368 - +1.0 2,689,543 + +0.4 2,689,544 - -0.2 2,689,649 - +0.7 2,689,750 - +0.0 2,689,839 + -0.2 2,689,839 + -0.2 2,689,841 + -0.4 2,689,853 + +1.1 2,689,857 - +0.0 2,689,857 - +0.7 2,689,870 - -0.4 2,689,893 + EX28DRAFT_2652 0.12 -0.3 2,689,893 + EX28DRAFT_2652 0.12 -1.8 2,689,894 - EX28DRAFT_2652 0.12 +0.0 2,689,894 - EX28DRAFT_2652 0.12 -2.1 2,689,932 + EX28DRAFT_2652 0.16 -0.2 2,689,933 - EX28DRAFT_2652 0.16 +0.4 2,689,933 - EX28DRAFT_2652 0.16 -0.1 2,690,016 - EX28DRAFT_2652 0.24 -0.3 2,690,144 + EX28DRAFT_2652 0.36 +0.2 2,690,145 - EX28DRAFT_2652 0.36 +0.2 2,690,277 + EX28DRAFT_2652 0.48 +0.1 2,690,278 - EX28DRAFT_2652 0.49 +0.1 2,690,346 + EX28DRAFT_2652 0.55 +0.6 2,690,346 + EX28DRAFT_2652 0.55 -0.9 2,690,347 - EX28DRAFT_2652 0.55 -0.1
Or see this region's nucleotide sequence