Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2509 and EX28DRAFT_2510 are separated by 77 nucleotides EX28DRAFT_2510 and EX28DRAFT_2511 are separated by 86 nucleotides
EX28DRAFT_2509: EX28DRAFT_2509 - transcriptional regulator, LacI family, at 2,541,449 to 2,542,519
_2509
EX28DRAFT_2510: EX28DRAFT_2510 - Predicted membrane protein, at 2,542,597 to 2,543,208
_2510
EX28DRAFT_2511: EX28DRAFT_2511 - Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs, at 2,543,295 to 2,544,716
_2511
Position (kb)
2542
2543
2544 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2541.877 kb on - strand, within EX28DRAFT_2509 at 2542.381 kb on - strand, within EX28DRAFT_2509 at 2542.500 kb on + strand at 2542.501 kb on - strand at 2542.501 kb on - strand at 2542.550 kb on + strand at 2542.672 kb on - strand, within EX28DRAFT_2510 at 2542.672 kb on - strand, within EX28DRAFT_2510 at 2542.694 kb on + strand, within EX28DRAFT_2510 at 2542.694 kb on + strand, within EX28DRAFT_2510 at 2542.695 kb on - strand, within EX28DRAFT_2510 at 2542.695 kb on - strand, within EX28DRAFT_2510 at 2542.695 kb on - strand, within EX28DRAFT_2510 at 2542.856 kb on + strand, within EX28DRAFT_2510 at 2542.856 kb on + strand, within EX28DRAFT_2510 at 2542.857 kb on - strand, within EX28DRAFT_2510 at 2542.857 kb on - strand, within EX28DRAFT_2510 at 2543.108 kb on - strand, within EX28DRAFT_2510 at 2543.174 kb on - strand at 2543.183 kb on + strand at 2543.184 kb on - strand at 2543.184 kb on - strand at 2543.184 kb on - strand at 2543.295 kb on - strand at 2543.668 kb on - strand, within EX28DRAFT_2511 at 2543.668 kb on - strand, within EX28DRAFT_2511 at 2543.668 kb on - strand, within EX28DRAFT_2511 at 2544.056 kb on + strand, within EX28DRAFT_2511
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 2,541,877 - EX28DRAFT_2509 0.40 +0.4 2,542,381 - EX28DRAFT_2509 0.87 -0.1 2,542,500 + +0.3 2,542,501 - -1.6 2,542,501 - -0.5 2,542,550 + -0.9 2,542,672 - EX28DRAFT_2510 0.12 +0.2 2,542,672 - EX28DRAFT_2510 0.12 +1.1 2,542,694 + EX28DRAFT_2510 0.16 -0.3 2,542,694 + EX28DRAFT_2510 0.16 -0.6 2,542,695 - EX28DRAFT_2510 0.16 -0.2 2,542,695 - EX28DRAFT_2510 0.16 +1.8 2,542,695 - EX28DRAFT_2510 0.16 -0.5 2,542,856 + EX28DRAFT_2510 0.42 +0.4 2,542,856 + EX28DRAFT_2510 0.42 +0.6 2,542,857 - EX28DRAFT_2510 0.42 -0.9 2,542,857 - EX28DRAFT_2510 0.42 +0.0 2,543,108 - EX28DRAFT_2510 0.83 +0.7 2,543,174 - -1.9 2,543,183 + -1.5 2,543,184 - -0.7 2,543,184 - +0.6 2,543,184 - -0.1 2,543,295 - -1.7 2,543,668 - EX28DRAFT_2511 0.26 +0.2 2,543,668 - EX28DRAFT_2511 0.26 -0.7 2,543,668 - EX28DRAFT_2511 0.26 -0.5 2,544,056 + EX28DRAFT_2511 0.54 +0.6
Or see this region's nucleotide sequence