Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2471 and EX28DRAFT_2472 overlap by 4 nucleotides EX28DRAFT_2472 and EX28DRAFT_2473 overlap by 4 nucleotides EX28DRAFT_2473 and EX28DRAFT_2474 are separated by 108 nucleotides
EX28DRAFT_2471: EX28DRAFT_2471 - Membrane protease subunits, stomatin/prohibitin homologs, at 2,500,249 to 2,501,163
_2471
EX28DRAFT_2472: EX28DRAFT_2472 - Membrane protein implicated in regulation of membrane protease activity, at 2,501,160 to 2,501,612
_2472
EX28DRAFT_2473: EX28DRAFT_2473 - Cu(I)-responsive transcriptional regulator, at 2,501,609 to 2,502,019
_2473
EX28DRAFT_2474: EX28DRAFT_2474 - copper-(or silver)-translocating P-type ATPase, at 2,502,128 to 2,504,626
_2474
Position (kb)
2501
2502
2503 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2500.672 kb on - strand, within EX28DRAFT_2471 at 2500.672 kb on - strand, within EX28DRAFT_2471 at 2500.908 kb on - strand, within EX28DRAFT_2471 at 2501.005 kb on + strand, within EX28DRAFT_2471 at 2501.006 kb on - strand, within EX28DRAFT_2471 at 2501.006 kb on - strand, within EX28DRAFT_2471 at 2501.025 kb on + strand, within EX28DRAFT_2471 at 2501.462 kb on + strand, within EX28DRAFT_2472 at 2501.890 kb on + strand, within EX28DRAFT_2473 at 2501.961 kb on + strand, within EX28DRAFT_2473 at 2502.014 kb on - strand at 2502.063 kb on + strand at 2502.064 kb on - strand at 2502.097 kb on - strand at 2502.097 kb on - strand at 2502.113 kb on + strand at 2502.114 kb on - strand at 2502.139 kb on + strand at 2502.321 kb on + strand at 2502.837 kb on - strand, within EX28DRAFT_2474 at 2502.920 kb on + strand, within EX28DRAFT_2474 at 2502.921 kb on - strand, within EX28DRAFT_2474 at 2502.921 kb on - strand, within EX28DRAFT_2474 at 2502.925 kb on + strand, within EX28DRAFT_2474 at 2502.977 kb on + strand, within EX28DRAFT_2474 at 2502.980 kb on + strand, within EX28DRAFT_2474 at 2502.981 kb on - strand, within EX28DRAFT_2474 at 2502.981 kb on - strand, within EX28DRAFT_2474
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 2,500,672 - EX28DRAFT_2471 0.46 +0.4 2,500,672 - EX28DRAFT_2471 0.46 +0.9 2,500,908 - EX28DRAFT_2471 0.72 +0.1 2,501,005 + EX28DRAFT_2471 0.83 +0.0 2,501,006 - EX28DRAFT_2471 0.83 +0.2 2,501,006 - EX28DRAFT_2471 0.83 +1.2 2,501,025 + EX28DRAFT_2471 0.85 -0.1 2,501,462 + EX28DRAFT_2472 0.67 -0.0 2,501,890 + EX28DRAFT_2473 0.68 -2.7 2,501,961 + EX28DRAFT_2473 0.86 -0.2 2,502,014 - +0.9 2,502,063 + +0.2 2,502,064 - +0.5 2,502,097 - +0.9 2,502,097 - -2.9 2,502,113 + -0.7 2,502,114 - -2.5 2,502,139 + -3.8 2,502,321 + -2.0 2,502,837 - EX28DRAFT_2474 0.28 -2.5 2,502,920 + EX28DRAFT_2474 0.32 -2.6 2,502,921 - EX28DRAFT_2474 0.32 -1.9 2,502,921 - EX28DRAFT_2474 0.32 -3.9 2,502,925 + EX28DRAFT_2474 0.32 -4.1 2,502,977 + EX28DRAFT_2474 0.34 -2.5 2,502,980 + EX28DRAFT_2474 0.34 -3.4 2,502,981 - EX28DRAFT_2474 0.34 -3.7 2,502,981 - EX28DRAFT_2474 0.34 -4.2
Or see this region's nucleotide sequence