Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_2347 and EX28DRAFT_2348 are separated by 180 nucleotides EX28DRAFT_2348 and EX28DRAFT_2349 are separated by 60 nucleotides
EX28DRAFT_2347: EX28DRAFT_2347 - Threonine dehydrogenase and related Zn-dependent dehydrogenases, at 2,368,125 to 2,369,363
_2347
EX28DRAFT_2348: EX28DRAFT_2348 - Universal stress protein UspA and related nucleotide-binding proteins, at 2,369,544 to 2,369,972
_2348
EX28DRAFT_2349: EX28DRAFT_2349 - alkyl hydroperoxide reductase subunit F, at 2,370,033 to 2,371,598
_2349
Position (kb)
2369
2370 Strain fitness (log2 ratio)
-2
-1
0
1 at 2368.757 kb on + strand, within EX28DRAFT_2347 at 2368.758 kb on - strand, within EX28DRAFT_2347 at 2368.902 kb on - strand, within EX28DRAFT_2347 at 2369.351 kb on + strand at 2369.351 kb on + strand at 2369.351 kb on + strand at 2369.351 kb on + strand at 2369.351 kb on + strand at 2369.351 kb on + strand at 2369.351 kb on + strand at 2369.352 kb on - strand at 2369.352 kb on - strand at 2369.352 kb on - strand at 2369.352 kb on - strand at 2369.386 kb on + strand at 2369.392 kb on + strand at 2369.392 kb on + strand at 2369.392 kb on + strand at 2369.392 kb on + strand at 2369.392 kb on + strand at 2369.392 kb on + strand at 2369.392 kb on + strand at 2369.393 kb on - strand at 2369.393 kb on - strand at 2369.393 kb on - strand at 2369.393 kb on - strand at 2369.393 kb on - strand at 2369.395 kb on - strand at 2369.400 kb on + strand at 2369.400 kb on + strand at 2369.401 kb on - strand at 2369.404 kb on + strand at 2369.446 kb on + strand at 2369.459 kb on + strand at 2369.496 kb on - strand at 2369.525 kb on + strand at 2369.525 kb on + strand at 2369.543 kb on + strand at 2369.547 kb on + strand at 2369.547 kb on + strand at 2369.548 kb on - strand at 2369.821 kb on + strand, within EX28DRAFT_2348 at 2369.966 kb on - strand at 2369.966 kb on - strand at 2370.004 kb on + strand at 2370.021 kb on + strand at 2370.031 kb on + strand at 2370.032 kb on - strand at 2370.059 kb on - strand at 2370.151 kb on - strand at 2370.206 kb on + strand, within EX28DRAFT_2349 at 2370.206 kb on + strand, within EX28DRAFT_2349 at 2370.236 kb on + strand, within EX28DRAFT_2349 at 2370.237 kb on - strand, within EX28DRAFT_2349 at 2370.237 kb on - strand, within EX28DRAFT_2349 at 2370.568 kb on + strand, within EX28DRAFT_2349
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 2,368,757 + EX28DRAFT_2347 0.51 -0.8 2,368,758 - EX28DRAFT_2347 0.51 -0.2 2,368,902 - EX28DRAFT_2347 0.63 -0.2 2,369,351 + +0.2 2,369,351 + +0.4 2,369,351 + -0.7 2,369,351 + -1.0 2,369,351 + -0.1 2,369,351 + -0.9 2,369,351 + -0.3 2,369,352 - +0.6 2,369,352 - +0.1 2,369,352 - -1.1 2,369,352 - -0.9 2,369,386 + -0.2 2,369,392 + +0.4 2,369,392 + +0.3 2,369,392 + -0.3 2,369,392 + -0.3 2,369,392 + +0.3 2,369,392 + -1.4 2,369,392 + -0.4 2,369,393 - -0.2 2,369,393 - -0.1 2,369,393 - -0.3 2,369,393 - -0.1 2,369,393 - -1.3 2,369,395 - +0.1 2,369,400 + -0.2 2,369,400 + -0.3 2,369,401 - -0.1 2,369,404 + -0.2 2,369,446 + -0.3 2,369,459 + +0.1 2,369,496 - +0.4 2,369,525 + -0.8 2,369,525 + +0.4 2,369,543 + -0.4 2,369,547 + -0.8 2,369,547 + +0.5 2,369,548 - -0.2 2,369,821 + EX28DRAFT_2348 0.65 -2.0 2,369,966 - +0.2 2,369,966 - +0.5 2,370,004 + -1.0 2,370,021 + +0.6 2,370,031 + -0.4 2,370,032 - -1.5 2,370,059 - +0.5 2,370,151 - -1.4 2,370,206 + EX28DRAFT_2349 0.11 -1.4 2,370,206 + EX28DRAFT_2349 0.11 -0.4 2,370,236 + EX28DRAFT_2349 0.13 -0.5 2,370,237 - EX28DRAFT_2349 0.13 -0.5 2,370,237 - EX28DRAFT_2349 0.13 -1.6 2,370,568 + EX28DRAFT_2349 0.34 +0.5
Or see this region's nucleotide sequence