Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_2043

Experiment: MS_media with m-arsenite 1 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEX28DRAFT_2042 and EX28DRAFT_2043 are separated by 135 nucleotidesEX28DRAFT_2043 and EX28DRAFT_2044 are separated by 517 nucleotides EX28DRAFT_2042: EX28DRAFT_2042 - DNA segregation ATPase FtsK/SpoIIIE and related proteins, at 2,058,573 to 2,062,274 _2042 EX28DRAFT_2043: EX28DRAFT_2043 - transcriptional regulator, AsnC family, at 2,062,410 to 2,062,904 _2043 EX28DRAFT_2044: EX28DRAFT_2044 - thioredoxin-disulfide reductase, at 2,063,422 to 2,064,417 _2044 Position (kb) 2062 2063Strain fitness (log2 ratio) -6 -5 -4 -3 -2 -1 0 1at 2062.385 kb on - strandat 2062.421 kb on + strandat 2062.422 kb on - strandat 2062.422 kb on - strandat 2062.422 kb on - strandat 2062.465 kb on + strand, within EX28DRAFT_2043at 2062.465 kb on + strand, within EX28DRAFT_2043at 2062.465 kb on + strand, within EX28DRAFT_2043at 2062.466 kb on - strand, within EX28DRAFT_2043at 2062.466 kb on - strand, within EX28DRAFT_2043at 2062.466 kb on - strand, within EX28DRAFT_2043at 2062.466 kb on - strand, within EX28DRAFT_2043at 2062.665 kb on - strand, within EX28DRAFT_2043at 2062.721 kb on + strand, within EX28DRAFT_2043at 2062.721 kb on + strand, within EX28DRAFT_2043at 2062.722 kb on - strand, within EX28DRAFT_2043at 2062.724 kb on - strand, within EX28DRAFT_2043at 2062.854 kb on - strand, within EX28DRAFT_2043at 2062.896 kb on - strandat 2062.900 kb on - strandat 2062.900 kb on - strandat 2062.922 kb on - strandat 2063.006 kb on - strandat 2063.039 kb on - strandat 2063.077 kb on + strandat 2063.077 kb on + strandat 2063.078 kb on - strandat 2063.102 kb on - strandat 2063.102 kb on - strandat 2063.145 kb on - strandat 2063.154 kb on - strandat 2063.270 kb on - strandat 2063.290 kb on - strandat 2063.325 kb on - strandat 2063.409 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM
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2,062,385 - -1.8
2,062,421 + -2.6
2,062,422 - -2.3
2,062,422 - -2.1
2,062,422 - -2.6
2,062,465 + EX28DRAFT_2043 0.11 -2.0
2,062,465 + EX28DRAFT_2043 0.11 -5.9
2,062,465 + EX28DRAFT_2043 0.11 -3.1
2,062,466 - EX28DRAFT_2043 0.11 +0.3
2,062,466 - EX28DRAFT_2043 0.11 -2.9
2,062,466 - EX28DRAFT_2043 0.11 -3.7
2,062,466 - EX28DRAFT_2043 0.11 -1.2
2,062,665 - EX28DRAFT_2043 0.52 -3.6
2,062,721 + EX28DRAFT_2043 0.63 -4.6
2,062,721 + EX28DRAFT_2043 0.63 -5.2
2,062,722 - EX28DRAFT_2043 0.63 -4.2
2,062,724 - EX28DRAFT_2043 0.63 -4.5
2,062,854 - EX28DRAFT_2043 0.90 -3.4
2,062,896 - +0.9
2,062,900 - -2.5
2,062,900 - -0.4
2,062,922 - -2.5
2,063,006 - -1.2
2,063,039 - -1.4
2,063,077 + -2.7
2,063,077 + -1.8
2,063,078 - -2.8
2,063,102 - -1.2
2,063,102 - -4.0
2,063,145 - -2.4
2,063,154 - -1.2
2,063,270 - +0.3
2,063,290 - -0.5
2,063,325 - -1.1
2,063,409 - -0.8

Or see this region's nucleotide sequence