Strain Fitness in Enterobacter asburiae PDN3 around EX28DRAFT_2005

Experiment: MS_media with m-arsenite 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MS_media with m-arsenite 1 mM
2,009,066	-		EX28DRAFT_2004	0.72	-0.3
2,009,066	-		EX28DRAFT_2004	0.72	+0.4
2,009,066	-		EX28DRAFT_2004	0.72	-0.6
2,009,345	-		EX28DRAFT_2004	0.83	+0.4
2,009,354	+		EX28DRAFT_2004	0.83	-0.6
2,009,415	+		EX28DRAFT_2004	0.85	+0.7
2,009,415	+		EX28DRAFT_2004	0.85	+0.1
2,009,415	+		EX28DRAFT_2004	0.85	+0.1
2,009,416	-		EX28DRAFT_2004	0.85	-3.7
2,009,416	-		EX28DRAFT_2004	0.85	-0.8
2,009,416	-		EX28DRAFT_2004	0.85	+1.0
2,009,416	-		EX28DRAFT_2004	0.85	-0.4
2,009,416	-		EX28DRAFT_2004	0.85	-0.4
2,009,416	-		EX28DRAFT_2004	0.85	-0.1
2,009,417	+		EX28DRAFT_2004	0.85	+0.4
2,009,417	+		EX28DRAFT_2004	0.85	+0.6
2,009,528	+		EX28DRAFT_2004	0.90	-0.0
2,009,577	-				-0.4
2,009,578	+				+0.1
2,009,578	+				+1.3
2,009,579	-				-0.2
2,009,600	+				-2.0
2,009,601	-				-0.1
2,009,601	-				+1.1
2,009,703	-				-1.2
2,009,774	-				-0.6
2,009,798	+				-0.2
2,009,798	+				+0.2
2,009,837	+				-0.1
2,009,837	+				-3.6
2,009,838	-				-0.2
2,009,838	-				+0.8
2,009,840	-				-0.8
2,009,840	-				-0.2
2,009,905	+				+0.4
2,009,913	+				-0.9
2,009,913	+				+1.7
2,009,916	-				+0.7
2,009,945	-				-1.6
2,009,945	-				-2.1
2,009,955	+				-0.8
2,009,956	-				-1.2
2,009,956	-				-1.7
2,009,956	-				-0.1
2,009,956	-				-0.3
2,009,976	+				-1.8
2,009,976	+				-0.0
2,009,976	+				+0.1
2,009,977	-				-0.4
2,009,977	-				-0.5
2,009,977	-				-0.8
2,009,977	-				-2.0
2,009,977	-				-1.1
2,009,977	-				-0.1
2,009,984	+				-3.5
2,009,985	-				-1.6
2,009,985	-				-0.2
2,009,985	-				-0.2
2,009,994	-				+0.1
2,009,994	-				-0.0
2,009,994	-				+0.3
2,009,994	-				-2.0
2,009,994	-				-0.7
2,009,995	+				-0.0
2,009,996	-				-0.3
2,009,996	-				-1.1
2,009,996	-				-0.3
2,009,996	-				-1.7
2,010,010	+				+0.9
2,010,041	+				-1.5
2,010,041	+				-0.6
2,010,041	+				-1.7
2,010,042	-				-1.3
2,010,042	-				-0.7
2,010,042	-				+0.7
2,010,042	-				+0.1
2,010,052	+				-0.1
2,010,052	+				-1.0
2,010,052	+				+0.3
2,010,052	+				-1.0
2,010,052	+				-1.0
2,010,053	-				-1.9
2,010,053	-				-0.6
2,010,053	-				-0.0
2,010,053	-				+0.5
2,010,053	-				-0.3
2,010,053	-				+0.1
2,010,053	-				+0.1
2,010,082	+				-0.6
2,010,082	+				-0.3
2,010,083	-				-0.4
2,010,083	-				+0.5
2,010,083	-				-1.2
2,010,106	+				-0.5
2,010,107	-				-1.2
2,010,115	+				-2.3
2,010,115	+				-3.8
2,010,116	-				-0.8
2,010,140	+				-0.8
2,010,140	+				-0.1
2,010,141	-				-0.8
2,010,141	-				-2.7
2,010,141	-				-0.2
2,010,141	-				+0.2
2,010,143	+				-0.8
2,010,143	+				-1.1
2,010,143	+				-1.5
2,010,143	+				+0.1
2,010,143	+				-0.8
2,010,143	+				-0.8
2,010,144	-				-1.0
2,010,144	-				-2.4
2,010,144	-				-0.5
2,010,200	+		EX28DRAFT_2005	0.12	-0.9
2,010,201	-		EX28DRAFT_2005	0.12	-1.5
2,010,232	+		EX28DRAFT_2005	0.15	-0.6
2,010,232	+		EX28DRAFT_2005	0.15	-0.9
2,010,233	-		EX28DRAFT_2005	0.15	-0.9
2,010,233	-		EX28DRAFT_2005	0.15	-1.3
2,010,264	-		EX28DRAFT_2005	0.18	-3.1
2,010,331	+		EX28DRAFT_2005	0.23	-0.1
2,010,509	-		EX28DRAFT_2005	0.38	-1.1
2,010,662	+		EX28DRAFT_2005	0.51	-1.9
2,010,662	+		EX28DRAFT_2005	0.51	-0.5
2,010,663	-		EX28DRAFT_2005	0.51	-1.2
2,010,663	-		EX28DRAFT_2005	0.51	+0.5
2,010,787	-		EX28DRAFT_2005	0.61	-3.4
2,010,829	+		EX28DRAFT_2005	0.65	-1.4
2,010,830	-		EX28DRAFT_2005	0.65	-0.8
2,010,832	+		EX28DRAFT_2005	0.65	-1.3
2,010,833	-		EX28DRAFT_2005	0.65	-0.0
2,010,944	+		EX28DRAFT_2005	0.74	-0.3
2,011,040	-		EX28DRAFT_2005	0.82	-0.1
2,011,135	+				-0.3
2,011,253	+				+0.2
2,011,254	-				+0.4
2,011,294	+				-0.9
2,011,294	+				+0.3
2,011,295	-				-0.1
2,011,328	+				+0.5
2,011,328	+				-0.0