Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1759 and EX28DRAFT_1760 overlap by 8 nucleotides EX28DRAFT_1760 and EX28DRAFT_1761 are separated by 75 nucleotides EX28DRAFT_1761 and EX28DRAFT_1762 overlap by 41 nucleotides EX28DRAFT_1762 and EX28DRAFT_1763 are separated by 228 nucleotides
EX28DRAFT_1759: EX28DRAFT_1759 - Phosphatidylglycerophosphate synthase, at 1,774,900 to 1,775,517
_1759
EX28DRAFT_1760: EX28DRAFT_1760 - Uncharacterized conserved protein, at 1,775,510 to 1,776,079
_1760
EX28DRAFT_1761: EX28DRAFT_1761 - NUDIX domain, at 1,776,155 to 1,776,571
_1761
EX28DRAFT_1762: EX28DRAFT_1762 - Protein of unknown function (DUF1496), at 1,776,531 to 1,776,809
_1762
EX28DRAFT_1763: EX28DRAFT_1763 - Glutamate dehydrogenase/leucine dehydrogenase, at 1,777,038 to 1,778,381
_1763
Position (kb) 1776
1777 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1775.240 kb on + strand, within EX28DRAFT_1759 at 1775.240 kb on + strand, within EX28DRAFT_1759 at 1775.241 kb on - strand, within EX28DRAFT_1759 at 1775.451 kb on + strand, within EX28DRAFT_1759 at 1775.576 kb on - strand, within EX28DRAFT_1760 at 1775.779 kb on + strand, within EX28DRAFT_1760 at 1776.026 kb on + strand at 1776.119 kb on + strand at 1776.122 kb on + strand at 1776.205 kb on + strand, within EX28DRAFT_1761 at 1776.206 kb on - strand, within EX28DRAFT_1761 at 1776.206 kb on - strand, within EX28DRAFT_1761 at 1776.305 kb on - strand, within EX28DRAFT_1761 at 1776.353 kb on + strand, within EX28DRAFT_1761 at 1776.354 kb on - strand, within EX28DRAFT_1761 at 1776.354 kb on - strand, within EX28DRAFT_1761 at 1776.469 kb on + strand, within EX28DRAFT_1761 at 1776.652 kb on + strand, within EX28DRAFT_1762 at 1776.656 kb on + strand, within EX28DRAFT_1762 at 1776.656 kb on + strand, within EX28DRAFT_1762 at 1776.656 kb on + strand, within EX28DRAFT_1762 at 1776.656 kb on + strand, within EX28DRAFT_1762 at 1776.656 kb on + strand, within EX28DRAFT_1762 at 1776.656 kb on + strand, within EX28DRAFT_1762 at 1776.656 kb on + strand, within EX28DRAFT_1762 at 1776.657 kb on - strand, within EX28DRAFT_1762 at 1776.658 kb on - strand, within EX28DRAFT_1762 at 1776.668 kb on + strand, within EX28DRAFT_1762 at 1776.784 kb on - strand at 1776.795 kb on + strand at 1776.796 kb on - strand at 1776.796 kb on - strand at 1776.799 kb on + strand at 1776.825 kb on + strand at 1776.826 kb on - strand at 1776.836 kb on + strand at 1776.843 kb on + strand at 1776.844 kb on - strand at 1776.845 kb on + strand at 1776.875 kb on + strand at 1776.969 kb on + strand at 1777.001 kb on + strand at 1777.001 kb on + strand at 1777.002 kb on - strand at 1777.002 kb on - strand at 1777.015 kb on + strand at 1777.032 kb on - strand at 1777.032 kb on - strand at 1777.033 kb on + strand at 1777.034 kb on - strand at 1777.034 kb on - strand at 1777.131 kb on - strand at 1777.131 kb on - strand at 1777.258 kb on + strand, within EX28DRAFT_1763 at 1777.383 kb on - strand, within EX28DRAFT_1763
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 1,775,240 + EX28DRAFT_1759 0.55 -0.6 1,775,240 + EX28DRAFT_1759 0.55 +0.0 1,775,241 - EX28DRAFT_1759 0.55 +0.0 1,775,451 + EX28DRAFT_1759 0.89 +0.1 1,775,576 - EX28DRAFT_1760 0.12 -0.3 1,775,779 + EX28DRAFT_1760 0.47 +0.4 1,776,026 + -0.2 1,776,119 + -0.7 1,776,122 + +0.3 1,776,205 + EX28DRAFT_1761 0.12 -0.0 1,776,206 - EX28DRAFT_1761 0.12 -0.4 1,776,206 - EX28DRAFT_1761 0.12 -1.1 1,776,305 - EX28DRAFT_1761 0.36 -0.6 1,776,353 + EX28DRAFT_1761 0.47 -0.8 1,776,354 - EX28DRAFT_1761 0.48 +1.0 1,776,354 - EX28DRAFT_1761 0.48 -0.2 1,776,469 + EX28DRAFT_1761 0.75 -1.8 1,776,652 + EX28DRAFT_1762 0.43 -1.0 1,776,656 + EX28DRAFT_1762 0.45 +0.5 1,776,656 + EX28DRAFT_1762 0.45 -0.0 1,776,656 + EX28DRAFT_1762 0.45 -0.9 1,776,656 + EX28DRAFT_1762 0.45 +0.3 1,776,656 + EX28DRAFT_1762 0.45 +0.6 1,776,656 + EX28DRAFT_1762 0.45 -1.1 1,776,656 + EX28DRAFT_1762 0.45 +0.3 1,776,657 - EX28DRAFT_1762 0.45 -0.1 1,776,658 - EX28DRAFT_1762 0.46 -0.6 1,776,668 + EX28DRAFT_1762 0.49 +0.2 1,776,784 - +0.4 1,776,795 + +0.5 1,776,796 - -0.4 1,776,796 - -0.2 1,776,799 + -2.6 1,776,825 + +0.4 1,776,826 - +0.2 1,776,836 + +1.9 1,776,843 + -0.1 1,776,844 - +0.2 1,776,845 + -0.0 1,776,875 + -0.0 1,776,969 + -0.8 1,777,001 + -0.9 1,777,001 + +0.1 1,777,002 - +0.3 1,777,002 - +0.2 1,777,015 + +0.1 1,777,032 - -0.2 1,777,032 - +0.2 1,777,033 + +0.2 1,777,034 - -0.1 1,777,034 - +0.9 1,777,131 - +0.9 1,777,131 - -0.3 1,777,258 + EX28DRAFT_1763 0.16 +0.6 1,777,383 - EX28DRAFT_1763 0.26 -1.1
Or see this region's nucleotide sequence