Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1707 and EX28DRAFT_1708 are separated by 140 nucleotides EX28DRAFT_1708 and EX28DRAFT_1709 are separated by 2 nucleotides EX28DRAFT_1709 and EX28DRAFT_1710 are separated by 9 nucleotides
EX28DRAFT_1707: EX28DRAFT_1707 - Transcriptional regulator, at 1,723,606 to 1,724,508
_1707
EX28DRAFT_1708: EX28DRAFT_1708 - 3-oxoacid CoA-transferase, A subunit, at 1,724,649 to 1,725,356
_1708
EX28DRAFT_1709: EX28DRAFT_1709 - 3-oxoacid CoA-transferase, B subunit, at 1,725,359 to 1,726,015
_1709
EX28DRAFT_1710: EX28DRAFT_1710 - acetyl-CoA acetyltransferases, at 1,726,025 to 1,727,206
_1710
Position (kb)
1724
1725
1726 Strain fitness (log2 ratio)
-2
-1
0
1 at 1723.669 kb on - strand at 1723.680 kb on + strand at 1723.680 kb on + strand at 1723.680 kb on + strand at 1723.680 kb on + strand at 1723.681 kb on - strand at 1723.738 kb on - strand, within EX28DRAFT_1707 at 1724.173 kb on + strand, within EX28DRAFT_1707 at 1724.173 kb on + strand, within EX28DRAFT_1707 at 1724.173 kb on + strand, within EX28DRAFT_1707 at 1724.244 kb on + strand, within EX28DRAFT_1707 at 1724.467 kb on + strand at 1724.663 kb on + strand at 1724.948 kb on + strand, within EX28DRAFT_1708 at 1724.948 kb on + strand, within EX28DRAFT_1708 at 1725.078 kb on + strand, within EX28DRAFT_1708 at 1725.078 kb on + strand, within EX28DRAFT_1708 at 1725.079 kb on - strand, within EX28DRAFT_1708 at 1725.269 kb on + strand, within EX28DRAFT_1708 at 1725.283 kb on - strand, within EX28DRAFT_1708 at 1725.363 kb on + strand at 1725.414 kb on - strand at 1725.416 kb on + strand at 1725.459 kb on - strand, within EX28DRAFT_1709 at 1725.857 kb on - strand, within EX28DRAFT_1709 at 1725.923 kb on + strand, within EX28DRAFT_1709 at 1725.924 kb on - strand, within EX28DRAFT_1709 at 1726.167 kb on + strand, within EX28DRAFT_1710 at 1726.168 kb on - strand, within EX28DRAFT_1710 at 1726.168 kb on - strand, within EX28DRAFT_1710 at 1726.300 kb on - strand, within EX28DRAFT_1710
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 1,723,669 - +0.4 1,723,680 + -2.3 1,723,680 + +0.8 1,723,680 + -0.7 1,723,680 + +0.1 1,723,681 - +0.3 1,723,738 - EX28DRAFT_1707 0.15 +0.9 1,724,173 + EX28DRAFT_1707 0.63 +0.2 1,724,173 + EX28DRAFT_1707 0.63 -0.3 1,724,173 + EX28DRAFT_1707 0.63 -1.5 1,724,244 + EX28DRAFT_1707 0.71 -0.5 1,724,467 + -0.9 1,724,663 + -0.6 1,724,948 + EX28DRAFT_1708 0.42 +1.5 1,724,948 + EX28DRAFT_1708 0.42 -1.6 1,725,078 + EX28DRAFT_1708 0.61 -0.2 1,725,078 + EX28DRAFT_1708 0.61 -0.3 1,725,079 - EX28DRAFT_1708 0.61 +0.1 1,725,269 + EX28DRAFT_1708 0.88 +0.4 1,725,283 - EX28DRAFT_1708 0.90 -0.3 1,725,363 + +0.3 1,725,414 - -0.4 1,725,416 + +0.1 1,725,459 - EX28DRAFT_1709 0.15 +1.7 1,725,857 - EX28DRAFT_1709 0.76 -0.4 1,725,923 + EX28DRAFT_1709 0.86 +0.2 1,725,924 - EX28DRAFT_1709 0.86 +0.0 1,726,167 + EX28DRAFT_1710 0.12 +0.1 1,726,168 - EX28DRAFT_1710 0.12 +0.4 1,726,168 - EX28DRAFT_1710 0.12 +0.4 1,726,300 - EX28DRAFT_1710 0.23 -0.5
Or see this region's nucleotide sequence