Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1683 and EX28DRAFT_1684 overlap by 4 nucleotides EX28DRAFT_1684 and EX28DRAFT_1685 overlap by 26 nucleotides EX28DRAFT_1685 and EX28DRAFT_1686 are separated by 9 nucleotides
EX28DRAFT_1683: EX28DRAFT_1683 - cysteine desulfurases, SufSfamily, at 1,695,222 to 1,696,442
_1683
EX28DRAFT_1684: EX28DRAFT_1684 - FeS assembly protein SufD, at 1,696,439 to 1,697,710
_1684
EX28DRAFT_1685: EX28DRAFT_1685 - FeS assembly ATPase SufC, at 1,697,685 to 1,698,431
_1685
EX28DRAFT_1686: EX28DRAFT_1686 - FeS assembly protein SufB, at 1,698,441 to 1,699,931
_1686
Position (kb) 1696
1697
1698 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 1695.542 kb on + strand, within EX28DRAFT_1683 at 1695.542 kb on + strand, within EX28DRAFT_1683 at 1695.543 kb on - strand, within EX28DRAFT_1683 at 1695.565 kb on + strand, within EX28DRAFT_1683 at 1695.565 kb on + strand, within EX28DRAFT_1683 at 1695.565 kb on + strand, within EX28DRAFT_1683 at 1695.566 kb on - strand, within EX28DRAFT_1683 at 1695.566 kb on - strand, within EX28DRAFT_1683 at 1695.666 kb on + strand, within EX28DRAFT_1683 at 1696.136 kb on + strand, within EX28DRAFT_1683 at 1696.142 kb on + strand, within EX28DRAFT_1683 at 1696.143 kb on - strand, within EX28DRAFT_1683 at 1696.265 kb on + strand, within EX28DRAFT_1683 at 1696.272 kb on - strand, within EX28DRAFT_1683 at 1696.303 kb on + strand, within EX28DRAFT_1683 at 1696.366 kb on + strand at 1696.367 kb on - strand at 1696.539 kb on + strand at 1696.539 kb on + strand at 1696.539 kb on + strand at 1696.543 kb on + strand at 1696.544 kb on - strand at 1696.590 kb on + strand, within EX28DRAFT_1684 at 1696.590 kb on + strand, within EX28DRAFT_1684 at 1696.807 kb on + strand, within EX28DRAFT_1684 at 1696.986 kb on + strand, within EX28DRAFT_1684 at 1696.986 kb on + strand, within EX28DRAFT_1684 at 1696.987 kb on - strand, within EX28DRAFT_1684 at 1697.010 kb on - strand, within EX28DRAFT_1684 at 1697.558 kb on - strand, within EX28DRAFT_1684 at 1697.559 kb on + strand, within EX28DRAFT_1684 at 1697.579 kb on - strand, within EX28DRAFT_1684 at 1697.686 kb on + strand at 1697.687 kb on - strand at 1697.687 kb on - strand at 1697.700 kb on - strand at 1697.762 kb on + strand, within EX28DRAFT_1685 at 1697.762 kb on + strand, within EX28DRAFT_1685 at 1697.803 kb on + strand, within EX28DRAFT_1685 at 1697.803 kb on + strand, within EX28DRAFT_1685 at 1697.928 kb on + strand, within EX28DRAFT_1685 at 1697.928 kb on + strand, within EX28DRAFT_1685 at 1697.972 kb on + strand, within EX28DRAFT_1685 at 1698.275 kb on - strand, within EX28DRAFT_1685 at 1698.399 kb on + strand at 1698.427 kb on - strand at 1698.590 kb on - strand, within EX28DRAFT_1686 at 1698.667 kb on + strand, within EX28DRAFT_1686 at 1698.677 kb on + strand, within EX28DRAFT_1686 at 1698.678 kb on - strand, within EX28DRAFT_1686
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 1,695,542 + EX28DRAFT_1683 0.26 -3.0 1,695,542 + EX28DRAFT_1683 0.26 -1.4 1,695,543 - EX28DRAFT_1683 0.26 -2.4 1,695,565 + EX28DRAFT_1683 0.28 -1.0 1,695,565 + EX28DRAFT_1683 0.28 -4.2 1,695,565 + EX28DRAFT_1683 0.28 -0.8 1,695,566 - EX28DRAFT_1683 0.28 -2.5 1,695,566 - EX28DRAFT_1683 0.28 -2.1 1,695,666 + EX28DRAFT_1683 0.36 -3.9 1,696,136 + EX28DRAFT_1683 0.75 -1.9 1,696,142 + EX28DRAFT_1683 0.75 -1.2 1,696,143 - EX28DRAFT_1683 0.75 -2.8 1,696,265 + EX28DRAFT_1683 0.85 -1.5 1,696,272 - EX28DRAFT_1683 0.86 -4.6 1,696,303 + EX28DRAFT_1683 0.89 -1.2 1,696,366 + -3.8 1,696,367 - -1.3 1,696,539 + -0.2 1,696,539 + -1.9 1,696,539 + -0.8 1,696,543 + -4.3 1,696,544 - -1.9 1,696,590 + EX28DRAFT_1684 0.12 -2.1 1,696,590 + EX28DRAFT_1684 0.12 -3.3 1,696,807 + EX28DRAFT_1684 0.29 -4.2 1,696,986 + EX28DRAFT_1684 0.43 -3.7 1,696,986 + EX28DRAFT_1684 0.43 -2.2 1,696,987 - EX28DRAFT_1684 0.43 -1.9 1,697,010 - EX28DRAFT_1684 0.45 +0.3 1,697,558 - EX28DRAFT_1684 0.88 -0.1 1,697,559 + EX28DRAFT_1684 0.88 -2.1 1,697,579 - EX28DRAFT_1684 0.90 -3.4 1,697,686 + -2.1 1,697,687 - -2.0 1,697,687 - -1.6 1,697,700 - -0.5 1,697,762 + EX28DRAFT_1685 0.10 +0.9 1,697,762 + EX28DRAFT_1685 0.10 -2.0 1,697,803 + EX28DRAFT_1685 0.16 -1.7 1,697,803 + EX28DRAFT_1685 0.16 +0.2 1,697,928 + EX28DRAFT_1685 0.33 -2.6 1,697,928 + EX28DRAFT_1685 0.33 -1.0 1,697,972 + EX28DRAFT_1685 0.38 +0.1 1,698,275 - EX28DRAFT_1685 0.79 -2.9 1,698,399 + -2.4 1,698,427 - -3.7 1,698,590 - EX28DRAFT_1686 0.10 -2.6 1,698,667 + EX28DRAFT_1686 0.15 -2.4 1,698,677 + EX28DRAFT_1686 0.16 -3.9 1,698,678 - EX28DRAFT_1686 0.16 -3.1
Or see this region's nucleotide sequence