Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1598 and EX28DRAFT_1599 are separated by 452 nucleotides EX28DRAFT_1599 and EX28DRAFT_1600 are separated by 209 nucleotides EX28DRAFT_1600 and EX28DRAFT_1601 are separated by 182 nucleotides
EX28DRAFT_1598: EX28DRAFT_1598 - P63C domain, at 1,613,416 to 1,614,402
_1598
EX28DRAFT_1599: EX28DRAFT_1599 - hypothetical protein, at 1,614,855 to 1,615,046
_1599
EX28DRAFT_1600: EX28DRAFT_1600 - Protein of unknown function (DUF1482), at 1,615,256 to 1,615,432
_1600
EX28DRAFT_1601: EX28DRAFT_1601 - Enterobacterial exodeoxyribonuclease VIII, at 1,615,615 to 1,618,776
_1601
Position (kb)
1614
1615
1616 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 1613.918 kb on + strand, within EX28DRAFT_1598 at 1613.949 kb on + strand, within EX28DRAFT_1598 at 1614.045 kb on - strand, within EX28DRAFT_1598 at 1614.060 kb on + strand, within EX28DRAFT_1598 at 1614.066 kb on + strand, within EX28DRAFT_1598 at 1614.077 kb on - strand, within EX28DRAFT_1598 at 1614.089 kb on + strand, within EX28DRAFT_1598 at 1614.142 kb on + strand, within EX28DRAFT_1598 at 1614.207 kb on + strand, within EX28DRAFT_1598 at 1614.212 kb on + strand, within EX28DRAFT_1598 at 1614.212 kb on + strand, within EX28DRAFT_1598 at 1614.212 kb on + strand, within EX28DRAFT_1598 at 1614.212 kb on + strand, within EX28DRAFT_1598 at 1614.223 kb on - strand, within EX28DRAFT_1598 at 1614.285 kb on + strand, within EX28DRAFT_1598 at 1614.400 kb on + strand at 1614.431 kb on + strand at 1614.468 kb on + strand at 1614.469 kb on - strand at 1614.472 kb on + strand at 1614.526 kb on + strand at 1614.672 kb on - strand at 1614.716 kb on - strand at 1614.737 kb on + strand at 1614.748 kb on - strand at 1614.748 kb on - strand at 1614.748 kb on - strand at 1614.749 kb on + strand at 1614.749 kb on + strand at 1614.750 kb on - strand at 1614.779 kb on + strand at 1614.796 kb on + strand at 1614.829 kb on - strand at 1614.848 kb on + strand at 1614.848 kb on + strand at 1614.848 kb on + strand at 1614.848 kb on + strand at 1614.848 kb on + strand at 1614.848 kb on + strand at 1614.848 kb on + strand at 1614.848 kb on + strand at 1614.849 kb on - strand at 1614.849 kb on - strand at 1614.849 kb on - strand at 1614.849 kb on - strand at 1614.850 kb on + strand at 1614.851 kb on - strand at 1614.851 kb on - strand at 1614.851 kb on - strand at 1614.851 kb on - strand at 1614.851 kb on - strand at 1614.856 kb on + strand at 1614.986 kb on - strand, within EX28DRAFT_1599 at 1614.993 kb on - strand, within EX28DRAFT_1599 at 1614.993 kb on - strand, within EX28DRAFT_1599 at 1614.993 kb on - strand, within EX28DRAFT_1599 at 1614.994 kb on + strand, within EX28DRAFT_1599 at 1614.994 kb on + strand, within EX28DRAFT_1599 at 1614.994 kb on + strand, within EX28DRAFT_1599 at 1614.995 kb on - strand, within EX28DRAFT_1599 at 1614.995 kb on - strand, within EX28DRAFT_1599 at 1614.995 kb on - strand, within EX28DRAFT_1599 at 1614.995 kb on - strand, within EX28DRAFT_1599 at 1615.022 kb on - strand, within EX28DRAFT_1599 at 1615.051 kb on - strand at 1615.062 kb on + strand at 1615.063 kb on - strand at 1615.108 kb on - strand at 1615.131 kb on - strand at 1615.131 kb on - strand at 1615.134 kb on + strand at 1615.218 kb on + strand at 1615.250 kb on - strand at 1615.250 kb on - strand at 1615.250 kb on - strand at 1615.330 kb on - strand, within EX28DRAFT_1600 at 1615.331 kb on + strand, within EX28DRAFT_1600 at 1615.331 kb on + strand, within EX28DRAFT_1600 at 1615.397 kb on + strand, within EX28DRAFT_1600 at 1615.398 kb on - strand, within EX28DRAFT_1600 at 1615.461 kb on + strand at 1615.472 kb on - strand at 1615.592 kb on - strand at 1615.592 kb on - strand at 1615.592 kb on - strand at 1615.592 kb on - strand at 1615.592 kb on - strand at 1615.604 kb on - strand at 1615.740 kb on + strand at 1615.741 kb on - strand at 1615.766 kb on - strand at 1616.029 kb on + strand, within EX28DRAFT_1601 at 1616.030 kb on - strand, within EX28DRAFT_1601 at 1616.030 kb on - strand, within EX28DRAFT_1601 at 1616.038 kb on + strand, within EX28DRAFT_1601 at 1616.038 kb on + strand, within EX28DRAFT_1601 at 1616.038 kb on + strand, within EX28DRAFT_1601 at 1616.038 kb on + strand, within EX28DRAFT_1601 at 1616.038 kb on + strand, within EX28DRAFT_1601 at 1616.038 kb on + strand, within EX28DRAFT_1601 at 1616.038 kb on + strand, within EX28DRAFT_1601 at 1616.039 kb on - strand, within EX28DRAFT_1601 at 1616.039 kb on - strand, within EX28DRAFT_1601 at 1616.039 kb on - strand, within EX28DRAFT_1601 at 1616.039 kb on - strand, within EX28DRAFT_1601 at 1616.039 kb on - strand, within EX28DRAFT_1601 at 1616.039 kb on - strand, within EX28DRAFT_1601 at 1616.039 kb on - strand, within EX28DRAFT_1601 at 1616.039 kb on - strand, within EX28DRAFT_1601
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 1,613,918 + EX28DRAFT_1598 0.51 +0.1 1,613,949 + EX28DRAFT_1598 0.54 -1.3 1,614,045 - EX28DRAFT_1598 0.64 +0.3 1,614,060 + EX28DRAFT_1598 0.65 -0.8 1,614,066 + EX28DRAFT_1598 0.66 +0.3 1,614,077 - EX28DRAFT_1598 0.67 -0.9 1,614,089 + EX28DRAFT_1598 0.68 +0.3 1,614,142 + EX28DRAFT_1598 0.74 +0.1 1,614,207 + EX28DRAFT_1598 0.80 +1.2 1,614,212 + EX28DRAFT_1598 0.81 -0.6 1,614,212 + EX28DRAFT_1598 0.81 +0.9 1,614,212 + EX28DRAFT_1598 0.81 +0.1 1,614,212 + EX28DRAFT_1598 0.81 +1.0 1,614,223 - EX28DRAFT_1598 0.82 -1.3 1,614,285 + EX28DRAFT_1598 0.88 +0.9 1,614,400 + -1.1 1,614,431 + -2.3 1,614,468 + -0.2 1,614,469 - -0.7 1,614,472 + -1.9 1,614,526 + -0.0 1,614,672 - +0.5 1,614,716 - -0.1 1,614,737 + -2.4 1,614,748 - -0.2 1,614,748 - -0.9 1,614,748 - -1.5 1,614,749 + -2.3 1,614,749 + -0.1 1,614,750 - +0.3 1,614,779 + -0.9 1,614,796 + +0.2 1,614,829 - -0.1 1,614,848 + -0.2 1,614,848 + +0.3 1,614,848 + +0.1 1,614,848 + +0.8 1,614,848 + +0.6 1,614,848 + +1.9 1,614,848 + +0.6 1,614,848 + -0.8 1,614,849 - -0.2 1,614,849 - +0.4 1,614,849 - +0.4 1,614,849 - +0.3 1,614,850 + +0.4 1,614,851 - -0.4 1,614,851 - -0.2 1,614,851 - +0.2 1,614,851 - -0.3 1,614,851 - -0.3 1,614,856 + -3.3 1,614,986 - EX28DRAFT_1599 0.68 +0.3 1,614,993 - EX28DRAFT_1599 0.72 +1.0 1,614,993 - EX28DRAFT_1599 0.72 -0.7 1,614,993 - EX28DRAFT_1599 0.72 +0.1 1,614,994 + EX28DRAFT_1599 0.72 +0.6 1,614,994 + EX28DRAFT_1599 0.72 +0.3 1,614,994 + EX28DRAFT_1599 0.72 +1.0 1,614,995 - EX28DRAFT_1599 0.73 +0.2 1,614,995 - EX28DRAFT_1599 0.73 -0.8 1,614,995 - EX28DRAFT_1599 0.73 +0.5 1,614,995 - EX28DRAFT_1599 0.73 +0.1 1,615,022 - EX28DRAFT_1599 0.87 +0.3 1,615,051 - +0.1 1,615,062 + -1.2 1,615,063 - -0.1 1,615,108 - -0.6 1,615,131 - +0.2 1,615,131 - +0.6 1,615,134 + +0.2 1,615,218 + +0.6 1,615,250 - -5.0 1,615,250 - +0.3 1,615,250 - +0.4 1,615,330 - EX28DRAFT_1600 0.42 -0.0 1,615,331 + EX28DRAFT_1600 0.42 -0.1 1,615,331 + EX28DRAFT_1600 0.42 -0.6 1,615,397 + EX28DRAFT_1600 0.80 -0.1 1,615,398 - EX28DRAFT_1600 0.80 +0.7 1,615,461 + +0.2 1,615,472 - +0.8 1,615,592 - +0.8 1,615,592 - -2.1 1,615,592 - -0.0 1,615,592 - -0.2 1,615,592 - +0.1 1,615,604 - +0.9 1,615,740 + +0.2 1,615,741 - +0.2 1,615,766 - +0.1 1,616,029 + EX28DRAFT_1601 0.13 +1.4 1,616,030 - EX28DRAFT_1601 0.13 +0.7 1,616,030 - EX28DRAFT_1601 0.13 -0.5 1,616,038 + EX28DRAFT_1601 0.13 -0.5 1,616,038 + EX28DRAFT_1601 0.13 -0.3 1,616,038 + EX28DRAFT_1601 0.13 +0.7 1,616,038 + EX28DRAFT_1601 0.13 -1.3 1,616,038 + EX28DRAFT_1601 0.13 +0.2 1,616,038 + EX28DRAFT_1601 0.13 -1.1 1,616,038 + EX28DRAFT_1601 0.13 +0.1 1,616,039 - EX28DRAFT_1601 0.13 +0.6 1,616,039 - EX28DRAFT_1601 0.13 -0.4 1,616,039 - EX28DRAFT_1601 0.13 +0.4 1,616,039 - EX28DRAFT_1601 0.13 +0.6 1,616,039 - EX28DRAFT_1601 0.13 +0.3 1,616,039 - EX28DRAFT_1601 0.13 +0.5 1,616,039 - EX28DRAFT_1601 0.13 -1.0 1,616,039 - EX28DRAFT_1601 0.13 +0.7
Or see this region's nucleotide sequence