Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1270 and EX28DRAFT_1271 overlap by 59 nucleotides EX28DRAFT_1271 and EX28DRAFT_1272 overlap by 8 nucleotides EX28DRAFT_1272 and EX28DRAFT_1273 overlap by 1 nucleotides EX28DRAFT_1273 and EX28DRAFT_1274 are separated by 1 nucleotides
EX28DRAFT_1270: EX28DRAFT_1270 - Putative phage tail protein, at 1,287,299 to 1,289,782
_1270
EX28DRAFT_1271: EX28DRAFT_1271 - NlpC/P60 family, at 1,289,724 to 1,290,161
_1271
EX28DRAFT_1272: EX28DRAFT_1272 - hypothetical protein, at 1,290,154 to 1,290,624
_1272
EX28DRAFT_1273: EX28DRAFT_1273 - hypothetical protein, at 1,290,624 to 1,291,118
_1273
EX28DRAFT_1274: EX28DRAFT_1274 - hypothetical protein, at 1,291,120 to 1,294,545
_1274
Position (kb)
1289
1290
1291 Strain fitness (log2 ratio)
-1
0
1 at 1288.728 kb on - strand, within EX28DRAFT_1270 at 1288.728 kb on - strand, within EX28DRAFT_1270 at 1288.730 kb on - strand, within EX28DRAFT_1270 at 1288.851 kb on + strand, within EX28DRAFT_1270 at 1288.852 kb on - strand, within EX28DRAFT_1270 at 1288.852 kb on - strand, within EX28DRAFT_1270 at 1288.857 kb on + strand, within EX28DRAFT_1270 at 1288.857 kb on + strand, within EX28DRAFT_1270 at 1289.061 kb on + strand, within EX28DRAFT_1270 at 1289.061 kb on + strand, within EX28DRAFT_1270 at 1289.202 kb on + strand, within EX28DRAFT_1270 at 1289.211 kb on + strand, within EX28DRAFT_1270 at 1289.212 kb on - strand, within EX28DRAFT_1270 at 1289.227 kb on + strand, within EX28DRAFT_1270 at 1289.227 kb on + strand, within EX28DRAFT_1270 at 1289.227 kb on + strand, within EX28DRAFT_1270 at 1289.271 kb on + strand, within EX28DRAFT_1270 at 1289.271 kb on + strand, within EX28DRAFT_1270 at 1289.271 kb on + strand, within EX28DRAFT_1270 at 1289.308 kb on - strand, within EX28DRAFT_1270 at 1289.308 kb on - strand, within EX28DRAFT_1270 at 1289.434 kb on + strand, within EX28DRAFT_1270 at 1289.435 kb on - strand, within EX28DRAFT_1270 at 1289.435 kb on - strand, within EX28DRAFT_1270 at 1289.435 kb on - strand, within EX28DRAFT_1270 at 1289.546 kb on + strand at 1289.592 kb on - strand at 1289.671 kb on + strand at 1289.726 kb on - strand at 1289.788 kb on + strand, within EX28DRAFT_1271 at 1289.808 kb on + strand, within EX28DRAFT_1271 at 1289.895 kb on + strand, within EX28DRAFT_1271 at 1289.895 kb on + strand, within EX28DRAFT_1271 at 1289.896 kb on - strand, within EX28DRAFT_1271 at 1289.987 kb on - strand, within EX28DRAFT_1271 at 1290.114 kb on - strand, within EX28DRAFT_1271 at 1290.143 kb on + strand at 1290.155 kb on + strand at 1290.191 kb on + strand at 1290.191 kb on + strand at 1290.279 kb on - strand, within EX28DRAFT_1272 at 1290.333 kb on - strand, within EX28DRAFT_1272 at 1290.333 kb on - strand, within EX28DRAFT_1272 at 1290.346 kb on - strand, within EX28DRAFT_1272 at 1290.540 kb on - strand, within EX28DRAFT_1272 at 1290.557 kb on + strand, within EX28DRAFT_1272 at 1290.558 kb on - strand, within EX28DRAFT_1272 at 1290.558 kb on - strand, within EX28DRAFT_1272 at 1290.831 kb on + strand, within EX28DRAFT_1273 at 1290.910 kb on + strand, within EX28DRAFT_1273
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 1,288,728 - EX28DRAFT_1270 0.58 +0.2 1,288,728 - EX28DRAFT_1270 0.58 -0.1 1,288,730 - EX28DRAFT_1270 0.58 +0.8 1,288,851 + EX28DRAFT_1270 0.62 -0.4 1,288,852 - EX28DRAFT_1270 0.63 +0.7 1,288,852 - EX28DRAFT_1270 0.63 +1.1 1,288,857 + EX28DRAFT_1270 0.63 +1.2 1,288,857 + EX28DRAFT_1270 0.63 -0.6 1,289,061 + EX28DRAFT_1270 0.71 -0.5 1,289,061 + EX28DRAFT_1270 0.71 +1.6 1,289,202 + EX28DRAFT_1270 0.77 -0.3 1,289,211 + EX28DRAFT_1270 0.77 -0.8 1,289,212 - EX28DRAFT_1270 0.77 +0.2 1,289,227 + EX28DRAFT_1270 0.78 -0.4 1,289,227 + EX28DRAFT_1270 0.78 +0.3 1,289,227 + EX28DRAFT_1270 0.78 +1.3 1,289,271 + EX28DRAFT_1270 0.79 +0.5 1,289,271 + EX28DRAFT_1270 0.79 -1.7 1,289,271 + EX28DRAFT_1270 0.79 +0.8 1,289,308 - EX28DRAFT_1270 0.81 -0.2 1,289,308 - EX28DRAFT_1270 0.81 +0.2 1,289,434 + EX28DRAFT_1270 0.86 +0.2 1,289,435 - EX28DRAFT_1270 0.86 -0.2 1,289,435 - EX28DRAFT_1270 0.86 -0.4 1,289,435 - EX28DRAFT_1270 0.86 -1.4 1,289,546 + -1.4 1,289,592 - +0.4 1,289,671 + -0.0 1,289,726 - +0.1 1,289,788 + EX28DRAFT_1271 0.15 -1.5 1,289,808 + EX28DRAFT_1271 0.19 -0.5 1,289,895 + EX28DRAFT_1271 0.39 +1.2 1,289,895 + EX28DRAFT_1271 0.39 +1.0 1,289,896 - EX28DRAFT_1271 0.39 +0.9 1,289,987 - EX28DRAFT_1271 0.60 +0.9 1,290,114 - EX28DRAFT_1271 0.89 -0.6 1,290,143 + -0.5 1,290,155 + -0.1 1,290,191 + -0.9 1,290,191 + -1.5 1,290,279 - EX28DRAFT_1272 0.27 +0.2 1,290,333 - EX28DRAFT_1272 0.38 +0.2 1,290,333 - EX28DRAFT_1272 0.38 +0.1 1,290,346 - EX28DRAFT_1272 0.41 +0.6 1,290,540 - EX28DRAFT_1272 0.82 +0.1 1,290,557 + EX28DRAFT_1272 0.86 -0.5 1,290,558 - EX28DRAFT_1272 0.86 -0.1 1,290,558 - EX28DRAFT_1272 0.86 +1.3 1,290,831 + EX28DRAFT_1273 0.42 +1.0 1,290,910 + EX28DRAFT_1273 0.58 -0.2
Or see this region's nucleotide sequence