Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1262 and EX28DRAFT_1263 are separated by 179 nucleotides EX28DRAFT_1263 and EX28DRAFT_1264 are separated by 179 nucleotides EX28DRAFT_1264 and EX28DRAFT_1265 are separated by 169 nucleotides
EX28DRAFT_1262: EX28DRAFT_1262 - Peptidase S24-like, at 1,279,947 to 1,280,366
_1262
EX28DRAFT_1263: EX28DRAFT_1263 - hypothetical protein, at 1,280,546 to 1,280,809
_1263
EX28DRAFT_1264: EX28DRAFT_1264 - Predicted acyltransferases, at 1,280,989 to 1,282,077
_1264
EX28DRAFT_1265: EX28DRAFT_1265 - ORF6N domain, at 1,282,247 to 1,282,936
_1265
Position (kb)
1280
1281
1282
1283 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1
2 at 1280.027 kb on - strand, within EX28DRAFT_1262 at 1280.114 kb on + strand, within EX28DRAFT_1262 at 1280.115 kb on - strand, within EX28DRAFT_1262 at 1280.142 kb on - strand, within EX28DRAFT_1262 at 1280.206 kb on - strand, within EX28DRAFT_1262 at 1280.213 kb on - strand, within EX28DRAFT_1262 at 1280.213 kb on - strand, within EX28DRAFT_1262 at 1280.216 kb on + strand, within EX28DRAFT_1262 at 1280.217 kb on - strand, within EX28DRAFT_1262 at 1280.217 kb on - strand, within EX28DRAFT_1262 at 1280.255 kb on + strand, within EX28DRAFT_1262 at 1280.270 kb on - strand, within EX28DRAFT_1262 at 1280.373 kb on + strand at 1280.373 kb on + strand at 1280.415 kb on + strand at 1280.471 kb on + strand at 1280.500 kb on - strand at 1280.548 kb on - strand at 1280.548 kb on - strand at 1280.548 kb on - strand at 1280.587 kb on + strand, within EX28DRAFT_1263 at 1280.593 kb on + strand, within EX28DRAFT_1263 at 1280.594 kb on - strand, within EX28DRAFT_1263 at 1280.594 kb on - strand, within EX28DRAFT_1263 at 1280.594 kb on - strand, within EX28DRAFT_1263 at 1280.598 kb on - strand, within EX28DRAFT_1263 at 1280.598 kb on - strand, within EX28DRAFT_1263 at 1280.710 kb on + strand, within EX28DRAFT_1263 at 1280.710 kb on + strand, within EX28DRAFT_1263 at 1280.710 kb on + strand, within EX28DRAFT_1263 at 1280.710 kb on + strand, within EX28DRAFT_1263 at 1280.711 kb on - strand, within EX28DRAFT_1263 at 1280.711 kb on - strand, within EX28DRAFT_1263 at 1280.711 kb on - strand, within EX28DRAFT_1263 at 1280.711 kb on - strand, within EX28DRAFT_1263 at 1280.711 kb on - strand, within EX28DRAFT_1263 at 1280.711 kb on - strand, within EX28DRAFT_1263 at 1280.711 kb on - strand, within EX28DRAFT_1263 at 1280.711 kb on - strand, within EX28DRAFT_1263 at 1280.760 kb on + strand, within EX28DRAFT_1263 at 1280.766 kb on + strand, within EX28DRAFT_1263 at 1280.811 kb on - strand at 1280.835 kb on - strand at 1280.854 kb on + strand at 1280.855 kb on - strand at 1280.915 kb on - strand at 1280.948 kb on - strand at 1280.986 kb on - strand at 1281.018 kb on - strand at 1281.149 kb on - strand, within EX28DRAFT_1264 at 1281.149 kb on - strand, within EX28DRAFT_1264 at 1281.193 kb on - strand, within EX28DRAFT_1264 at 1281.266 kb on - strand, within EX28DRAFT_1264 at 1281.267 kb on + strand, within EX28DRAFT_1264 at 1281.269 kb on + strand, within EX28DRAFT_1264 at 1281.294 kb on - strand, within EX28DRAFT_1264 at 1281.358 kb on + strand, within EX28DRAFT_1264 at 1281.922 kb on - strand, within EX28DRAFT_1264 at 1281.923 kb on + strand, within EX28DRAFT_1264 at 1281.974 kb on + strand at 1281.978 kb on - strand at 1281.997 kb on - strand at 1282.015 kb on + strand at 1282.025 kb on + strand at 1282.085 kb on - strand at 1282.085 kb on - strand at 1282.119 kb on + strand at 1282.176 kb on + strand at 1282.178 kb on + strand at 1282.179 kb on - strand at 1282.179 kb on - strand at 1282.203 kb on + strand at 1282.204 kb on - strand at 1282.373 kb on - strand, within EX28DRAFT_1265 at 1282.373 kb on - strand, within EX28DRAFT_1265 at 1282.511 kb on - strand, within EX28DRAFT_1265 at 1282.623 kb on + strand, within EX28DRAFT_1265 at 1282.624 kb on - strand, within EX28DRAFT_1265 at 1282.624 kb on - strand, within EX28DRAFT_1265 at 1282.627 kb on + strand, within EX28DRAFT_1265 at 1282.627 kb on + strand, within EX28DRAFT_1265 at 1282.628 kb on - strand, within EX28DRAFT_1265 at 1282.717 kb on + strand, within EX28DRAFT_1265 at 1282.717 kb on + strand, within EX28DRAFT_1265 at 1282.718 kb on - strand, within EX28DRAFT_1265 at 1282.793 kb on - strand, within EX28DRAFT_1265 at 1282.959 kb on + strand at 1283.011 kb on - strand at 1283.021 kb on - strand at 1283.076 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 1,280,027 - EX28DRAFT_1262 0.19 +0.0 1,280,114 + EX28DRAFT_1262 0.40 +0.5 1,280,115 - EX28DRAFT_1262 0.40 +0.1 1,280,142 - EX28DRAFT_1262 0.46 +0.4 1,280,206 - EX28DRAFT_1262 0.62 -6.3 1,280,213 - EX28DRAFT_1262 0.63 -0.1 1,280,213 - EX28DRAFT_1262 0.63 +0.3 1,280,216 + EX28DRAFT_1262 0.64 +0.1 1,280,217 - EX28DRAFT_1262 0.64 +0.4 1,280,217 - EX28DRAFT_1262 0.64 +1.2 1,280,255 + EX28DRAFT_1262 0.73 -0.6 1,280,270 - EX28DRAFT_1262 0.77 -0.1 1,280,373 + -0.1 1,280,373 + -3.0 1,280,415 + +0.0 1,280,471 + +0.1 1,280,500 - -0.1 1,280,548 - -0.5 1,280,548 - -0.2 1,280,548 - -0.3 1,280,587 + EX28DRAFT_1263 0.16 +2.7 1,280,593 + EX28DRAFT_1263 0.18 -0.4 1,280,594 - EX28DRAFT_1263 0.18 +0.9 1,280,594 - EX28DRAFT_1263 0.18 -0.4 1,280,594 - EX28DRAFT_1263 0.18 -0.7 1,280,598 - EX28DRAFT_1263 0.20 +0.7 1,280,598 - EX28DRAFT_1263 0.20 -2.3 1,280,710 + EX28DRAFT_1263 0.62 +0.3 1,280,710 + EX28DRAFT_1263 0.62 -0.3 1,280,710 + EX28DRAFT_1263 0.62 -0.2 1,280,710 + EX28DRAFT_1263 0.62 -1.3 1,280,711 - EX28DRAFT_1263 0.62 -0.1 1,280,711 - EX28DRAFT_1263 0.62 -0.4 1,280,711 - EX28DRAFT_1263 0.62 +0.8 1,280,711 - EX28DRAFT_1263 0.62 -0.4 1,280,711 - EX28DRAFT_1263 0.62 -2.0 1,280,711 - EX28DRAFT_1263 0.62 -0.1 1,280,711 - EX28DRAFT_1263 0.62 -0.2 1,280,711 - EX28DRAFT_1263 0.62 +0.9 1,280,760 + EX28DRAFT_1263 0.81 -0.1 1,280,766 + EX28DRAFT_1263 0.83 +1.1 1,280,811 - +0.3 1,280,835 - +0.1 1,280,854 + -1.1 1,280,855 - +1.7 1,280,915 - +1.1 1,280,948 - +0.5 1,280,986 - +0.1 1,281,018 - -0.3 1,281,149 - EX28DRAFT_1264 0.15 -0.0 1,281,149 - EX28DRAFT_1264 0.15 +0.7 1,281,193 - EX28DRAFT_1264 0.19 -0.5 1,281,266 - EX28DRAFT_1264 0.25 -0.1 1,281,267 + EX28DRAFT_1264 0.26 +0.1 1,281,269 + EX28DRAFT_1264 0.26 -0.4 1,281,294 - EX28DRAFT_1264 0.28 +1.0 1,281,358 + EX28DRAFT_1264 0.34 +0.1 1,281,922 - EX28DRAFT_1264 0.86 +1.1 1,281,923 + EX28DRAFT_1264 0.86 +0.3 1,281,974 + +1.1 1,281,978 - -0.5 1,281,997 - -0.2 1,282,015 + +0.2 1,282,025 + +0.7 1,282,085 - -0.4 1,282,085 - +0.5 1,282,119 + +0.2 1,282,176 + +0.4 1,282,178 + +0.3 1,282,179 - -0.9 1,282,179 - +0.6 1,282,203 + +0.4 1,282,204 - +0.5 1,282,373 - EX28DRAFT_1265 0.18 +0.7 1,282,373 - EX28DRAFT_1265 0.18 +0.7 1,282,511 - EX28DRAFT_1265 0.38 +0.4 1,282,623 + EX28DRAFT_1265 0.54 -0.4 1,282,624 - EX28DRAFT_1265 0.55 -1.2 1,282,624 - EX28DRAFT_1265 0.55 -0.2 1,282,627 + EX28DRAFT_1265 0.55 +0.4 1,282,627 + EX28DRAFT_1265 0.55 +0.4 1,282,628 - EX28DRAFT_1265 0.55 +1.3 1,282,717 + EX28DRAFT_1265 0.68 +1.0 1,282,717 + EX28DRAFT_1265 0.68 -0.1 1,282,718 - EX28DRAFT_1265 0.68 +0.2 1,282,793 - EX28DRAFT_1265 0.79 +0.6 1,282,959 + +0.4 1,283,011 - +0.2 1,283,021 - +0.4 1,283,076 - -0.6
Or see this region's nucleotide sequence