Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_1007 and EX28DRAFT_1008 are separated by 245 nucleotides EX28DRAFT_1008 and EX28DRAFT_1009 are separated by 428 nucleotides EX28DRAFT_1009 and EX28DRAFT_1010 are separated by 451 nucleotides
EX28DRAFT_1007: EX28DRAFT_1007 - Predicted ATPase of the PP-loop superfamily implicated in cell cycle control, at 1,013,130 to 1,014,065
_1007
EX28DRAFT_1008: EX28DRAFT_1008 - Cupin domain, at 1,014,311 to 1,014,631
_1008
EX28DRAFT_1009: EX28DRAFT_1009 - hypothetical protein, at 1,015,060 to 1,015,287
_1009
EX28DRAFT_1010: EX28DRAFT_1010 - Cold shock proteins, at 1,015,739 to 1,015,957
_1010
Position (kb)
1015
1016 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1014.163 kb on - strand at 1014.211 kb on + strand at 1014.212 kb on - strand at 1014.214 kb on - strand at 1014.214 kb on - strand at 1014.221 kb on + strand at 1014.222 kb on - strand at 1014.230 kb on + strand at 1014.247 kb on + strand at 1014.247 kb on + strand at 1014.250 kb on - strand at 1014.266 kb on + strand at 1014.266 kb on + strand at 1014.267 kb on - strand at 1014.267 kb on - strand at 1014.267 kb on - strand at 1014.268 kb on + strand at 1014.269 kb on - strand at 1014.284 kb on + strand at 1014.295 kb on - strand at 1014.309 kb on + strand at 1014.310 kb on - strand at 1014.368 kb on - strand, within EX28DRAFT_1008 at 1014.373 kb on - strand, within EX28DRAFT_1008 at 1014.442 kb on - strand, within EX28DRAFT_1008 at 1014.442 kb on - strand, within EX28DRAFT_1008 at 1014.502 kb on + strand, within EX28DRAFT_1008 at 1014.533 kb on + strand, within EX28DRAFT_1008 at 1014.533 kb on + strand, within EX28DRAFT_1008 at 1014.534 kb on - strand, within EX28DRAFT_1008 at 1014.536 kb on - strand, within EX28DRAFT_1008 at 1014.559 kb on + strand, within EX28DRAFT_1008 at 1014.706 kb on - strand at 1014.738 kb on + strand at 1014.739 kb on - strand at 1014.744 kb on - strand at 1014.744 kb on - strand at 1014.744 kb on - strand at 1014.746 kb on - strand at 1014.746 kb on - strand at 1014.902 kb on - strand at 1015.183 kb on + strand, within EX28DRAFT_1009 at 1015.234 kb on + strand, within EX28DRAFT_1009 at 1015.287 kb on + strand at 1015.353 kb on + strand at 1015.354 kb on - strand at 1015.558 kb on + strand at 1015.682 kb on - strand at 1015.962 kb on - strand at 1016.280 kb on - strand at 1016.280 kb on - strand at 1016.281 kb on + strand at 1016.282 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 1,014,163 - +0.7 1,014,211 + -0.2 1,014,212 - +0.7 1,014,214 - -0.3 1,014,214 - -0.1 1,014,221 + -0.8 1,014,222 - +0.3 1,014,230 + -1.4 1,014,247 + +2.1 1,014,247 + +0.5 1,014,250 - -1.2 1,014,266 + -0.1 1,014,266 + +0.3 1,014,267 - +0.2 1,014,267 - +0.4 1,014,267 - -0.5 1,014,268 + -0.4 1,014,269 - +0.8 1,014,284 + -0.3 1,014,295 - +1.0 1,014,309 + +0.0 1,014,310 - +0.2 1,014,368 - EX28DRAFT_1008 0.18 -0.8 1,014,373 - EX28DRAFT_1008 0.19 -0.5 1,014,442 - EX28DRAFT_1008 0.41 -0.5 1,014,442 - EX28DRAFT_1008 0.41 -1.3 1,014,502 + EX28DRAFT_1008 0.60 +0.4 1,014,533 + EX28DRAFT_1008 0.69 -2.7 1,014,533 + EX28DRAFT_1008 0.69 -0.9 1,014,534 - EX28DRAFT_1008 0.69 +0.6 1,014,536 - EX28DRAFT_1008 0.70 -0.9 1,014,559 + EX28DRAFT_1008 0.77 -0.3 1,014,706 - +0.1 1,014,738 + +0.1 1,014,739 - -0.3 1,014,744 - +0.2 1,014,744 - -0.4 1,014,744 - -0.0 1,014,746 - +0.0 1,014,746 - -0.0 1,014,902 - -0.7 1,015,183 + EX28DRAFT_1009 0.54 -1.7 1,015,234 + EX28DRAFT_1009 0.76 -1.2 1,015,287 + +0.6 1,015,353 + -0.1 1,015,354 - +0.2 1,015,558 + +1.8 1,015,682 - +0.1 1,015,962 - -0.2 1,016,280 - -0.1 1,016,280 - -1.7 1,016,281 + +0.9 1,016,282 - -0.6
Or see this region's nucleotide sequence