Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0934 and EX28DRAFT_0935 are separated by 3 nucleotides EX28DRAFT_0935 and EX28DRAFT_0936 overlap by 1 nucleotides
EX28DRAFT_0934: EX28DRAFT_0934 - indole-3-glycerol phosphate synthase (EC 4.1.1.48), at 932,695 to 934,053
_0934
EX28DRAFT_0935: EX28DRAFT_0935 - glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase, at 934,057 to 935,652
_0935
EX28DRAFT_0936: EX28DRAFT_0936 - anthranilate synthase, component I (EC 4.1.3.27), at 935,652 to 937,214
_0936
Position (kb) 934
935
936 Strain fitness (log2 ratio) -6
-5
-4
-3
-2
-1
0
1 at 933.108 kb on + strand, within EX28DRAFT_0934 at 933.108 kb on + strand, within EX28DRAFT_0934 at 933.108 kb on + strand, within EX28DRAFT_0934 at 933.134 kb on + strand, within EX28DRAFT_0934 at 933.134 kb on + strand, within EX28DRAFT_0934 at 933.134 kb on + strand, within EX28DRAFT_0934 at 933.135 kb on - strand, within EX28DRAFT_0934 at 933.135 kb on - strand, within EX28DRAFT_0934 at 933.163 kb on - strand, within EX28DRAFT_0934 at 933.163 kb on - strand, within EX28DRAFT_0934 at 933.377 kb on - strand, within EX28DRAFT_0934 at 933.377 kb on - strand, within EX28DRAFT_0934 at 933.669 kb on - strand, within EX28DRAFT_0934 at 933.669 kb on - strand, within EX28DRAFT_0934 at 933.702 kb on + strand, within EX28DRAFT_0934 at 933.706 kb on - strand, within EX28DRAFT_0934 at 933.824 kb on + strand, within EX28DRAFT_0934 at 933.935 kb on + strand at 934.111 kb on + strand at 934.112 kb on - strand at 934.112 kb on - strand at 934.112 kb on - strand at 934.228 kb on + strand, within EX28DRAFT_0935 at 934.290 kb on - strand, within EX28DRAFT_0935 at 934.290 kb on - strand, within EX28DRAFT_0935 at 934.326 kb on - strand, within EX28DRAFT_0935 at 934.326 kb on - strand, within EX28DRAFT_0935 at 934.596 kb on - strand, within EX28DRAFT_0935 at 934.662 kb on + strand, within EX28DRAFT_0935 at 934.674 kb on + strand, within EX28DRAFT_0935 at 934.789 kb on - strand, within EX28DRAFT_0935 at 934.801 kb on - strand, within EX28DRAFT_0935 at 934.828 kb on - strand, within EX28DRAFT_0935 at 935.235 kb on + strand, within EX28DRAFT_0935 at 935.373 kb on - strand, within EX28DRAFT_0935 at 935.565 kb on + strand at 935.565 kb on + strand at 935.609 kb on + strand at 935.610 kb on - strand at 935.626 kb on - strand at 935.681 kb on + strand at 936.038 kb on - strand, within EX28DRAFT_0936 at 936.340 kb on + strand, within EX28DRAFT_0936 at 936.341 kb on - strand, within EX28DRAFT_0936 at 936.374 kb on - strand, within EX28DRAFT_0936
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 933,108 + EX28DRAFT_0934 0.30 -3.2 933,108 + EX28DRAFT_0934 0.30 -3.0 933,108 + EX28DRAFT_0934 0.30 -2.0 933,134 + EX28DRAFT_0934 0.32 -3.8 933,134 + EX28DRAFT_0934 0.32 -2.9 933,134 + EX28DRAFT_0934 0.32 -3.0 933,135 - EX28DRAFT_0934 0.32 -2.8 933,135 - EX28DRAFT_0934 0.32 -1.6 933,163 - EX28DRAFT_0934 0.34 -2.3 933,163 - EX28DRAFT_0934 0.34 -4.2 933,377 - EX28DRAFT_0934 0.50 -4.3 933,377 - EX28DRAFT_0934 0.50 -1.8 933,669 - EX28DRAFT_0934 0.72 -2.8 933,669 - EX28DRAFT_0934 0.72 -3.6 933,702 + EX28DRAFT_0934 0.74 -0.3 933,706 - EX28DRAFT_0934 0.74 -2.7 933,824 + EX28DRAFT_0934 0.83 +0.7 933,935 + -1.4 934,111 + -1.3 934,112 - -3.4 934,112 - -2.2 934,112 - -3.9 934,228 + EX28DRAFT_0935 0.11 -3.8 934,290 - EX28DRAFT_0935 0.15 -3.5 934,290 - EX28DRAFT_0935 0.15 -4.7 934,326 - EX28DRAFT_0935 0.17 -2.3 934,326 - EX28DRAFT_0935 0.17 -4.0 934,596 - EX28DRAFT_0935 0.34 -3.4 934,662 + EX28DRAFT_0935 0.38 -3.6 934,674 + EX28DRAFT_0935 0.39 -1.0 934,789 - EX28DRAFT_0935 0.46 -0.6 934,801 - EX28DRAFT_0935 0.47 -2.0 934,828 - EX28DRAFT_0935 0.48 -2.0 935,235 + EX28DRAFT_0935 0.74 -1.4 935,373 - EX28DRAFT_0935 0.82 -2.9 935,565 + -2.8 935,565 + -4.9 935,609 + -4.8 935,610 - -5.9 935,626 - -5.5 935,681 + -3.6 936,038 - EX28DRAFT_0936 0.25 -3.7 936,340 + EX28DRAFT_0936 0.44 -4.8 936,341 - EX28DRAFT_0936 0.44 -3.2 936,374 - EX28DRAFT_0936 0.46 -2.6
Or see this region's nucleotide sequence