Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0869 and EX28DRAFT_0870 are separated by 14 nucleotides EX28DRAFT_0870 and EX28DRAFT_0871 are separated by 11 nucleotides EX28DRAFT_0871 and EX28DRAFT_0872 overlap by 4 nucleotides
EX28DRAFT_0869: EX28DRAFT_0869 - ABC-type dipeptide/oligopeptide/nickel transport systems, permease components, at 882,514 to 883,434
_0869
EX28DRAFT_0870: EX28DRAFT_0870 - ABC-type dipeptide/oligopeptide/nickel transport systems, permease components, at 883,449 to 884,357
_0870
EX28DRAFT_0871: EX28DRAFT_0871 - oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain, at 884,369 to 885,382
_0871
EX28DRAFT_0872: EX28DRAFT_0872 - oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain, at 885,379 to 886,383
_0872
Position (kb) 884
885
886 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 883.507 kb on + strand at 883.635 kb on - strand, within EX28DRAFT_0870 at 883.695 kb on + strand, within EX28DRAFT_0870 at 883.754 kb on + strand, within EX28DRAFT_0870 at 883.992 kb on - strand, within EX28DRAFT_0870 at 884.034 kb on - strand, within EX28DRAFT_0870 at 884.059 kb on + strand, within EX28DRAFT_0870 at 884.122 kb on - strand, within EX28DRAFT_0870 at 884.122 kb on - strand, within EX28DRAFT_0870 at 884.456 kb on - strand at 884.476 kb on + strand, within EX28DRAFT_0871 at 884.477 kb on - strand, within EX28DRAFT_0871 at 884.727 kb on - strand, within EX28DRAFT_0871 at 884.728 kb on + strand, within EX28DRAFT_0871 at 884.851 kb on + strand, within EX28DRAFT_0871 at 884.852 kb on - strand, within EX28DRAFT_0871 at 884.852 kb on - strand, within EX28DRAFT_0871 at 884.884 kb on + strand, within EX28DRAFT_0871 at 884.953 kb on + strand, within EX28DRAFT_0871 at 885.095 kb on + strand, within EX28DRAFT_0871 at 885.140 kb on + strand, within EX28DRAFT_0871 at 885.140 kb on + strand, within EX28DRAFT_0871 at 885.141 kb on - strand, within EX28DRAFT_0871 at 885.390 kb on - strand at 885.730 kb on - strand, within EX28DRAFT_0872 at 885.730 kb on - strand, within EX28DRAFT_0872 at 885.769 kb on + strand, within EX28DRAFT_0872 at 885.895 kb on - strand, within EX28DRAFT_0872 at 885.895 kb on - strand, within EX28DRAFT_0872 at 885.901 kb on - strand, within EX28DRAFT_0872 at 886.093 kb on + strand, within EX28DRAFT_0872 at 886.094 kb on - strand, within EX28DRAFT_0872 at 886.094 kb on - strand, within EX28DRAFT_0872 at 886.094 kb on - strand, within EX28DRAFT_0872 at 886.094 kb on - strand, within EX28DRAFT_0872 at 886.123 kb on + strand, within EX28DRAFT_0872 at 886.123 kb on + strand, within EX28DRAFT_0872 at 886.136 kb on - strand, within EX28DRAFT_0872 at 886.140 kb on + strand, within EX28DRAFT_0872 at 886.140 kb on + strand, within EX28DRAFT_0872 at 886.140 kb on + strand, within EX28DRAFT_0872 at 886.213 kb on - strand, within EX28DRAFT_0872 at 886.314 kb on + strand at 886.380 kb on - strand at 886.380 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 883,507 + +0.3 883,635 - EX28DRAFT_0870 0.20 -0.7 883,695 + EX28DRAFT_0870 0.27 +0.2 883,754 + EX28DRAFT_0870 0.34 +0.3 883,992 - EX28DRAFT_0870 0.60 +2.2 884,034 - EX28DRAFT_0870 0.64 -0.5 884,059 + EX28DRAFT_0870 0.67 +0.2 884,122 - EX28DRAFT_0870 0.74 -0.8 884,122 - EX28DRAFT_0870 0.74 -0.4 884,456 - -0.5 884,476 + EX28DRAFT_0871 0.11 +0.2 884,477 - EX28DRAFT_0871 0.11 -2.0 884,727 - EX28DRAFT_0871 0.35 -0.6 884,728 + EX28DRAFT_0871 0.35 -0.1 884,851 + EX28DRAFT_0871 0.48 +0.2 884,852 - EX28DRAFT_0871 0.48 +0.3 884,852 - EX28DRAFT_0871 0.48 -0.4 884,884 + EX28DRAFT_0871 0.51 -0.9 884,953 + EX28DRAFT_0871 0.58 -0.1 885,095 + EX28DRAFT_0871 0.72 -1.4 885,140 + EX28DRAFT_0871 0.76 -0.4 885,140 + EX28DRAFT_0871 0.76 +0.3 885,141 - EX28DRAFT_0871 0.76 -0.5 885,390 - -0.5 885,730 - EX28DRAFT_0872 0.35 +0.6 885,730 - EX28DRAFT_0872 0.35 -0.1 885,769 + EX28DRAFT_0872 0.39 -0.2 885,895 - EX28DRAFT_0872 0.51 -0.3 885,895 - EX28DRAFT_0872 0.51 +0.1 885,901 - EX28DRAFT_0872 0.52 +0.7 886,093 + EX28DRAFT_0872 0.71 +0.0 886,094 - EX28DRAFT_0872 0.71 +0.2 886,094 - EX28DRAFT_0872 0.71 +0.7 886,094 - EX28DRAFT_0872 0.71 -3.2 886,094 - EX28DRAFT_0872 0.71 +0.0 886,123 + EX28DRAFT_0872 0.74 +0.6 886,123 + EX28DRAFT_0872 0.74 -0.4 886,136 - EX28DRAFT_0872 0.75 -1.4 886,140 + EX28DRAFT_0872 0.76 -0.1 886,140 + EX28DRAFT_0872 0.76 -0.4 886,140 + EX28DRAFT_0872 0.76 -0.8 886,213 - EX28DRAFT_0872 0.83 +0.0 886,314 + -0.7 886,380 - +0.3 886,380 - +0.8
Or see this region's nucleotide sequence