Experiment: MS_media with m-arsenite 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt EX28DRAFT_0798 and EX28DRAFT_0799 overlap by 4 nucleotides EX28DRAFT_0799 and EX28DRAFT_0800 are separated by 82 nucleotides EX28DRAFT_0800 and EX28DRAFT_0801 overlap by 4 nucleotides EX28DRAFT_0801 and EX28DRAFT_0802 are separated by 16 nucleotides
EX28DRAFT_0798: EX28DRAFT_0798 - hypothetical protein, at 798,564 to 799,106
_0798
EX28DRAFT_0799: EX28DRAFT_0799 - hypothetical protein, at 799,103 to 799,504
_0799
EX28DRAFT_0800: EX28DRAFT_0800 - FHA domain protein, at 799,587 to 801,350
_0800
EX28DRAFT_0801: EX28DRAFT_0801 - Serine/threonine protein phosphatase, at 801,347 to 802,144
_0801
EX28DRAFT_0802: EX28DRAFT_0802 - hypothetical protein, at 802,161 to 803,159
_0802
Position (kb) 799
800
801
802 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 798.613 kb on + strand at 798.647 kb on - strand, within EX28DRAFT_0798 at 798.674 kb on + strand, within EX28DRAFT_0798 at 798.693 kb on - strand, within EX28DRAFT_0798 at 798.695 kb on + strand, within EX28DRAFT_0798 at 798.791 kb on + strand, within EX28DRAFT_0798 at 798.791 kb on + strand, within EX28DRAFT_0798 at 798.823 kb on + strand, within EX28DRAFT_0798 at 798.823 kb on + strand, within EX28DRAFT_0798 at 798.823 kb on + strand, within EX28DRAFT_0798 at 798.824 kb on - strand, within EX28DRAFT_0798 at 798.824 kb on - strand, within EX28DRAFT_0798 at 798.888 kb on - strand, within EX28DRAFT_0798 at 798.967 kb on - strand, within EX28DRAFT_0798 at 799.044 kb on - strand, within EX28DRAFT_0798 at 799.048 kb on - strand, within EX28DRAFT_0798 at 799.057 kb on + strand at 799.058 kb on - strand at 799.058 kb on - strand at 799.083 kb on - strand at 799.502 kb on + strand at 799.502 kb on + strand at 799.503 kb on - strand at 799.503 kb on - strand at 799.564 kb on - strand at 799.570 kb on - strand at 799.582 kb on - strand at 799.602 kb on - strand at 799.607 kb on + strand at 799.802 kb on - strand, within EX28DRAFT_0800 at 799.804 kb on + strand, within EX28DRAFT_0800 at 799.804 kb on + strand, within EX28DRAFT_0800 at 799.805 kb on - strand, within EX28DRAFT_0800 at 800.216 kb on + strand, within EX28DRAFT_0800 at 800.274 kb on - strand, within EX28DRAFT_0800 at 800.843 kb on + strand, within EX28DRAFT_0800 at 801.012 kb on - strand, within EX28DRAFT_0800 at 801.120 kb on - strand, within EX28DRAFT_0800 at 801.226 kb on - strand at 801.294 kb on + strand at 801.421 kb on - strand at 801.511 kb on + strand, within EX28DRAFT_0801 at 801.512 kb on - strand, within EX28DRAFT_0801 at 801.512 kb on - strand, within EX28DRAFT_0801 at 801.563 kb on + strand, within EX28DRAFT_0801 at 801.618 kb on - strand, within EX28DRAFT_0801 at 801.816 kb on - strand, within EX28DRAFT_0801 at 801.816 kb on - strand, within EX28DRAFT_0801 at 801.958 kb on + strand, within EX28DRAFT_0801 at 801.990 kb on + strand, within EX28DRAFT_0801 at 801.991 kb on - strand, within EX28DRAFT_0801 at 802.046 kb on + strand, within EX28DRAFT_0801 at 802.046 kb on + strand, within EX28DRAFT_0801 at 802.046 kb on + strand, within EX28DRAFT_0801 at 802.046 kb on + strand, within EX28DRAFT_0801 at 802.047 kb on - strand, within EX28DRAFT_0801 at 802.047 kb on - strand, within EX28DRAFT_0801 at 802.047 kb on - strand, within EX28DRAFT_0801 at 802.047 kb on - strand, within EX28DRAFT_0801 at 802.142 kb on + strand at 802.305 kb on - strand, within EX28DRAFT_0802
Per-strain Table
Position Strand Gene LocusTag Fraction MS_media with m-arsenite 1 mM remove 798,613 + +0.5 798,647 - EX28DRAFT_0798 0.15 +0.5 798,674 + EX28DRAFT_0798 0.20 -0.3 798,693 - EX28DRAFT_0798 0.24 -0.7 798,695 + EX28DRAFT_0798 0.24 +0.5 798,791 + EX28DRAFT_0798 0.42 +2.2 798,791 + EX28DRAFT_0798 0.42 +0.5 798,823 + EX28DRAFT_0798 0.48 +0.0 798,823 + EX28DRAFT_0798 0.48 +0.3 798,823 + EX28DRAFT_0798 0.48 -0.4 798,824 - EX28DRAFT_0798 0.48 -0.1 798,824 - EX28DRAFT_0798 0.48 +1.5 798,888 - EX28DRAFT_0798 0.60 -0.2 798,967 - EX28DRAFT_0798 0.74 +0.5 799,044 - EX28DRAFT_0798 0.88 -0.6 799,048 - EX28DRAFT_0798 0.89 +0.8 799,057 + -0.7 799,058 - +0.2 799,058 - +0.4 799,083 - -0.3 799,502 + -1.3 799,502 + +1.0 799,503 - +0.7 799,503 - +1.9 799,564 - +0.2 799,570 - +1.0 799,582 - -2.5 799,602 - +0.0 799,607 + +0.1 799,802 - EX28DRAFT_0800 0.12 +2.4 799,804 + EX28DRAFT_0800 0.12 +3.0 799,804 + EX28DRAFT_0800 0.12 +0.0 799,805 - EX28DRAFT_0800 0.12 -0.3 800,216 + EX28DRAFT_0800 0.36 +0.5 800,274 - EX28DRAFT_0800 0.39 -1.0 800,843 + EX28DRAFT_0800 0.71 -0.0 801,012 - EX28DRAFT_0800 0.81 -0.2 801,120 - EX28DRAFT_0800 0.87 +1.1 801,226 - -0.0 801,294 + +0.1 801,421 - +0.6 801,511 + EX28DRAFT_0801 0.21 -0.6 801,512 - EX28DRAFT_0801 0.21 +0.6 801,512 - EX28DRAFT_0801 0.21 -0.2 801,563 + EX28DRAFT_0801 0.27 -1.0 801,618 - EX28DRAFT_0801 0.34 +0.2 801,816 - EX28DRAFT_0801 0.59 +0.5 801,816 - EX28DRAFT_0801 0.59 -1.8 801,958 + EX28DRAFT_0801 0.77 -1.3 801,990 + EX28DRAFT_0801 0.81 -0.5 801,991 - EX28DRAFT_0801 0.81 -1.0 802,046 + EX28DRAFT_0801 0.88 -0.9 802,046 + EX28DRAFT_0801 0.88 +0.0 802,046 + EX28DRAFT_0801 0.88 +0.0 802,046 + EX28DRAFT_0801 0.88 -0.5 802,047 - EX28DRAFT_0801 0.88 +0.8 802,047 - EX28DRAFT_0801 0.88 -0.9 802,047 - EX28DRAFT_0801 0.88 -0.2 802,047 - EX28DRAFT_0801 0.88 -1.0 802,142 + +0.5 802,305 - EX28DRAFT_0802 0.14 +0.5
Or see this region's nucleotide sequence